RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Zbtb7cQ8VCZ7 619 aa11.83□□□□□ -0.51
Clcn3-205ENSMUST00000110302 Adamtsl3G3UXC7 1706 aa11.83□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Smg6P61406 1418 aaKnown RBP11.83□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Dnajc5P60904 198 aa11.82□□□□□ -0.52
Clcn3-205ENSMUST00000110302 CltcQ68FD5 1675 aaKnown RBP11.82□□□□□ -0.52
Clcn3-205ENSMUST00000110302 AatkQ80YE4 1365 aa11.82□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Myo3aQ8K3H5 1613 aa11.81□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Itsn1Q9Z0R4 1714 aa11.81□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Neurod1Q60867 357 aa11.81□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Kif13aQ9EQW7 1749 aa11.81□□□□□ -0.52
Clcn3-205ENSMUST00000110302 ErbinQ80TH2 1402 aa11.81□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Hnrnpul2Q00PI9 745 aaKnown RBP11.8□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Card11Q8CIS0 1159 aa11.8□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Ahdc1Q6PAL7 1594 aaKnown RBP11.8□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Kdm5aQ3UXZ9 1690 aa11.8□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Ppp1r18Q8BQ30 594 aa11.8□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Nop58Q6DFW4 536 aaKnown RBP11.79□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Grwd1Q810D6 446 aaKnown RBP11.79□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Sall3Q62255 1320 aa11.78□□□□□ -0.52
Clcn3-205ENSMUST00000110302 NpatQ8BMA5 1420 aa11.78□□□□□ -0.52
Clcn3-205ENSMUST00000110302 Skint5A7XUY5 1461 aa11.77□□□□□ -0.53
Clcn3-205ENSMUST00000110302 MaddQ80U28 1577 aa11.77□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Ifit1bl1D3Z6F0 470 aa11.76□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Mroh3A0A1D5RM54 893 aa11.75□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Hfm1D3Z4R1 1434 aa11.75□□□□□ -0.53
Clcn3-205ENSMUST00000110302 PtprmP28828 1452 aa11.75□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Zc3h13E9Q784 1729 aaKnown RBP11.74□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Nphp4P59240 1425 aa11.74□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Sbno1Q689Z5 1390 aa11.74□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Mapk8ip2Q9ERE9 830 aa11.73□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Med14A2ABV5 1459 aaKnown RBP11.73□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Chd2E9PZM4 1827 aaKnown RBP11.72□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Arhgef28P97433 1693 aa11.72□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Gm13695A2AK44 830 aa11.71□□□□□ -0.53
Clcn3-205ENSMUST00000110302 Eif2ak4Q9QZ05 1648 aa11.71□□□□□ -0.54
Clcn3-205ENSMUST00000110302 PplQ9R269 1755 aa11.7□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Rsph4aQ8BYM7 716 aa11.7□□□□□ -0.54
Clcn3-205ENSMUST00000110302 AU022751B1B0V2 589 aa11.7□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Plppr3Q7TPB0 716 aa11.68□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Erich6D3Z6S9 713 aa11.67□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Anks4bQ8K3X6 423 aa11.66□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Stard8Q8K031 1019 aa11.66□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Stk24Q99KH8 431 aa11.66□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Prrc2bQ7TPM1 1486 aaKnown RBP11.65□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Lrrc7Q80TE7 1490 aa11.65□□□□□ -0.54
Clcn3-205ENSMUST00000110302 PalldQ9ET54 1408 aa11.65□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Gemin5Q8BX17 1502 aaKnown RBP11.65□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Naip7Q9JIB3 1402 aa11.65□□□□□ -0.54
Clcn3-205ENSMUST00000110302 Dip2bQ3UH60 1574 aa11.64□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Gm16486A0A1D5RMD1 1434 aa11.64□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Ercc6l2Q9JIM3 1537 aa11.64□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Amer1Q7TS75 1132 aa11.64□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Srcin1Q9QWI6 1250 aa11.63□□□□□ -0.55
Clcn3-205ENSMUST00000110302 PrxO55103 1391 aa11.63□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Arid4bA2CG63 1314 aaKnown RBP11.63□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Slc52a2Q9D8F3 450 aa11.63□□□□□ -0.55
Clcn3-205ENSMUST00000110302 PnisrA2AJT4 805 aaKnown RBP11.62□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Afap1Q80YS6 731 aa11.62□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Dnajc5gQ8C632 165 aa11.62□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Dip2aQ8BWT5 1523 aa11.61□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Abca14E9Q8F8 1683 aa11.6□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Kdm2aP59997 1161 aa11.59□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Nwd1A6H603 1563 aa11.59□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Gm20521D3Z5F7 333 aa11.59□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Znf710Q3U288 666 aa11.58□□□□□ -0.55
Clcn3-205ENSMUST00000110302 Srpk2O54781 681 aaKnown RBP11.58□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Puf60Q3UEB3 564 aaKnown RBP11.58□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Fan1Q69ZT1 1020 aa11.58□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Usp40Q8BWR4 1235 aa11.58□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Slc4a2P13808 1237 aaKnown RBP11.57□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Tex14Q7M6U3 1450 aa11.57□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Exoc6Q8R313 802 aa11.57□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Cep170bQ80U49 1574 aa11.57□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Stra8P70278 393 aa11.56□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Slit3Q9WVB4 1523 aa11.56□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Plekhg1F6S200 1446 aa11.56□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Gtf2e1Q9D0D5 440 aa11.56□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Arap3Q8R5G7 1538 aa11.56□□□□□ -0.56
Clcn3-205ENSMUST00000110302 InsrP15208 1372 aa11.55□□□□□ -0.56
Clcn3-205ENSMUST00000110302 NktrP30415 1453 aa11.55□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Gprasp1Q5U4C1 1347 aa11.54□□□□□ -0.56
Clcn3-205ENSMUST00000110302 KdrP35918 1367 aa11.54□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Pank3Q8R2W9 370 aa11.54□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Nrxn1Q9CS84 1514 aa11.54□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Tmf1B9EKI3 1091 aa11.54□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Wwc2Q6NXJ0 1187 aa11.53□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Lmtk3Q5XJV6 1424 aa11.53□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Bcl9Q9D219 1425 aa11.53□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Cps1Q8C196 1500 aa11.52□□□□□ -0.56
Clcn3-205ENSMUST00000110302 Zscan10Q3URR7 782 aa11.52□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Usp32F8VPZ3 1604 aa11.51□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Fam184bQ0KK56 942 aa11.51□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Inpp5dQ9ES52 1191 aa11.51□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Mrs2Q5NCE8 434 aa11.5□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Alpk3Q924C5 1678 aa11.5□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Slc4a1apE9PX68 744 aa11.49□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Pik3c2bE9QAN8 1632 aa11.48□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Adgrl1Q80TR1 1466 aa11.47□□□□□ -0.57
Clcn3-205ENSMUST00000110302 4930407I10RikD3Z5T8 1512 aa11.47□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Os9Q8K2C7 672 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms