RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 Atf3Q60765 181 aa10.88□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Bcl11bQ99PV8 884 aa10.88□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Ubap1lG3UW59 384 aa10.88□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Trim58Q5NCC9 485 aa10.88□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Sf3a1Q8K4Z5 791 aaKnown RBP10.88□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Dhx16G3X8X0 1044 aaKnown RBP10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Pde4cQ3UEI1 686 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Kri1Q8VDQ9 704 aaKnown RBP10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Cc2d1aQ8K1A6 943 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Arap1Q4LDD4 1452 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 TchhA0A0B4J1F9 1599 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Puf60Q3UEB3 564 aaKnown RBP10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Glipr1l2Q9CQ35 332 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Erich3F6QRE9 1637 aa10.87□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Urb2E9Q7L1 1524 aaKnown RBP10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Tnnt2P50752 301 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 KinQ8K339 391 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Rnf20Q5DTM8 973 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Sirt1Q923E4 737 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Triml2E9PW10 424 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Gprasp1Q5U4C1 1347 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Tpm2P58774 284 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 4933402E13RikQ9D4D2 429 aa10.86□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Tpm4Q6IRU2 248 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 NexnQ7TPW1 607 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 TatQ8QZR1 454 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 PhaxQ9JJT9 385 aaKnown RBP10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Eif2s2Q99L45 331 aaKnown RBP10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Usp16Q99LG0 825 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Krt82Q99M74 516 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Arhgap5P97393 1501 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Wdr62Q3U3T8 1523 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Camsap1A2AHC3 1581 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Vps8Q0P5W1 1427 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Esx1O88933 382 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Atp2b2Q9R0K7 1198 aa10.85□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Tiam1Q60610 1591 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 A0A1L1SQF0 893 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Tpm1P58771 284 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Swt1Q9DBQ9 907 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Rrp12Q6P5B0 1295 aaKnown RBP10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Gnl3lQ6PGG6 577 aaKnown RBP10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Q8C5K5 320 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Mical1Q8VDP3 1048 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Casq1O09165 405 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 Ric3Q8BPM6 367 aa10.84□□□□□ -0.67
Prpf4-201ENSMUST00000084524 SlkO54988 1233 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Kiaa0754Q69ZZ9 979 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Sh3bgrQ9WUZ7 214 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Kif16bB1AVY7 1312 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Kdm5bQ80Y84 1544 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Zpr1Q62384 459 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Erc2Q6PH08 957 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ddrgk1Q80WW9 315 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ift140E9PY46 1464 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Rad54l2Q99NG0 1466 aa10.83□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Q9D9H8 365 aa10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Odf2A3KGV1 830 aaKnown RBP10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 CrcpO35427 148 aa10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Trim30aP15533 496 aa10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 UvssaQ9D479 717 aa10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ipo7Q9EPL8 1038 aaKnown RBP10.82□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Fgd6Q69ZL1 1399 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ccdc30Q8BVF4 654 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 PtprkP35822 1457 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Becn1O88597 448 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Cd109Q8R422 1442 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Cplx1P63040 134 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Atl3Q91YH5 541 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Unc13aQ4KUS2 1712 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Arhgap31A6X8Z5 1425 aa10.81□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Frmpd1A2AKB4 1549 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Rbm25B2RY56 838 aaKnown RBP10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Gm10471E9Q1C7 252 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 ChgaP26339 463 aaKnown RBP10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Eva1cP58659 440 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Neurod6P48986 337 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Cetn4Q8K4K1 168 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Cfdp1O88271 295 aaKnown RBP10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Pip4k2bQ80XI4 416 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Chrna2Q91X60 512 aa10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 SetQ9EQU5 289 aaKnown RBP10.8□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Duox2A2AQ99 1517 aa10.79□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ccp110Q7TSH4 1004 aa10.79□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Map3k5O35099 1380 aa10.79□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Sv2bQ8BG39 683 aa10.79□□□□□ -0.68
Prpf4-201ENSMUST00000084524 BccipQ9CWI3 316 aa10.79□□□□□ -0.68
Prpf4-201ENSMUST00000084524 AqrQ8CFQ3 1481 aaKnown RBP10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Rec8Q8C5S7 591 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 HypkQ9CR41 129 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ccdc171E9Q1U1 1324 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Mre11Q61216 706 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Q9D2X8 372 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Ankrd26Q811D2 1581 aa10.78□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Gabpb2P81069 414 aa10.77□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Gpatch11Q3UFS4 262 aa10.77□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Hook1Q8BIL5 728 aa10.77□□□□□ -0.68
Prpf4-201ENSMUST00000084524 Rpgrip1lQ8CG73 1264 aa10.77□□□□□ -0.69
Prpf4-201ENSMUST00000084524 Gm7298A0A0N4SVU1 1476 aa10.77□□□□□ -0.69
Prpf4-201ENSMUST00000084524 VgfQ0VGU4 617 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms