RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Nol10Q5RJG1 687 aaKnown RBP15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Filip1lQ6P6L0 1131 aa15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Ap3b2Q9JME5 1082 aa15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Nsd2Q8BVE8 1365 aa15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Ncoa2Q61026 1462 aa15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Rbm25B2RY56 838 aaKnown RBP15.4■□□□□ 0.06
Sdf4-201ENSMUST00000050078 Atl3Q91YH5 541 aa15.39■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Cd109Q8R422 1442 aa15.39■□□□□ 0.05
Sdf4-201ENSMUST00000050078 VgfQ0VGU4 617 aa15.39■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Plekhg5Q66T02 1073 aa15.39■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Arhgap31A6X8Z5 1425 aa15.39■□□□□ 0.05
Sdf4-201ENSMUST00000050078 St18Q80TY4 1045 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 4933402E13RikQ9D4D2 429 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 L3mbtl2P59178 703 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Ric3Q8BPM6 367 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Q9D2X8 372 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Tiam1Q60610 1591 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Phactr2B1AVP0 632 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 R3hcc1Q8BSI6 488 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Myom3A2ABU4 1439 aa15.38■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Map3k1P53349 1493 aa15.37■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Grin2bQ01097 1482 aa15.37■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Cald1E9QA15 768 aaKnown RBP15.37■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Kiaa0754Q69ZZ9 979 aa15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Becn1O88597 448 aa15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Stk11ipQ3TAA7 1072 aa15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Polr1aO35134 1717 aaKnown RBP15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Tnpo1Q8BFY9 898 aaKnown RBP15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Sf3a1Q8K4Z5 791 aaKnown RBP15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Q9D9H8 365 aa15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Nek4Q9Z1J2 792 aa15.36■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Gsto1O09131 240 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Gm7298A0A0N4SVU1 1476 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Swt1Q9DBQ9 907 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Rab3gap2Q8BMG7 1366 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Atp2b2Q9R0K7 1198 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Gm21190A0A0G2JGJ6 266 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Prdm16A2A935 1275 aa15.35■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Plcd4Q8K3R3 807 aa15.34■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Rsph4aQ8BYM7 716 aa15.34■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Gnai1B2RSH2 354 aa15.33■□□□□ 0.05
Sdf4-201ENSMUST00000050078 RdxP26043 583 aaKnown RBP15.33■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Gnai3Q9DC51 354 aa15.33■□□□□ 0.05
Sdf4-201ENSMUST00000050078 Urb2E9Q7L1 1524 aaKnown RBP15.33■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Mical1Q8VDP3 1048 aa15.33■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Ccer1Q9CQL2 403 aa15.33■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Ush1cQ9ES64 910 aa15.33■□□□□ 0.04
Sdf4-201ENSMUST00000050078 PogzQ8BZH4 1409 aaKnown RBP15.32■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Ppp2r3aB2RXC8 1150 aa15.31■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Trim30aP15533 496 aa15.31■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Nol12Q8BG17 217 aa15.31■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Q8BT18 775 aa15.31■□□□□ 0.04
Sdf4-201ENSMUST00000050078 AampJ3QN89 436 aa15.3■□□□□ 0.04
Sdf4-201ENSMUST00000050078 SkilQ60665 675 aa15.3■□□□□ 0.04
Sdf4-201ENSMUST00000050078 MlecQ6ZQI3 291 aaKnown RBP15.3■□□□□ 0.04
Sdf4-201ENSMUST00000050078 AppP12023 770 aa15.29■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Polr3gQ6NXY9 223 aa15.29■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Ciz1Q8VEH2 845 aa15.29■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Utp3Q9JI13 469 aaKnown RBP15.29■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Sh3bgrQ9WUZ7 214 aa15.29■□□□□ 0.04
Sdf4-201ENSMUST00000050078 CadpsQ80TJ1 1355 aa15.28■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Cetn4Q8K4K1 168 aa15.28■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Cspp1B2RX88 1205 aa15.27■□□□□ 0.04
Sdf4-201ENSMUST00000050078 PogkQ80TC5 607 aa15.27■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Dusp27Q148W8 1138 aa15.27■□□□□ 0.04
Sdf4-201ENSMUST00000050078 Nap1l3Q794H2 544 aa15.27■□□□□ 0.04
Sdf4-201ENSMUST00000050078 HdgfP51859 237 aaKnown RBP15.27■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Naip2Q9QUK4 1447 aa15.27■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Cavin4A2AMM0 362 aa15.27■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Tceal9Q9DD24 104 aa15.27■□□□□ 0.03
Sdf4-201ENSMUST00000050078 PrxO55103 1391 aa15.26■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Rnf214Q8BFU3 668 aaKnown RBP15.26■□□□□ 0.03
Sdf4-201ENSMUST00000050078 AqrQ8CFQ3 1481 aaKnown RBP15.26■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Hmox1P14901 289 aa15.26■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Gripap1Q8VD04 806 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 EprsQ8CGC7 1512 aaKnown RBP15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Calcoco2A2A6M5 331 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Glipr1l2Q9CQ35 332 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Tpm3-rs7D3Z2H9 248 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Cfdp1O88271 295 aaKnown RBP15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Fam163aQ8CAA5 168 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Frmpd1A2AKB4 1549 aa15.25■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Samd1D3YXK1 519 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Tspyl2Q7TQI8 677 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Ggt6Q6PDE7 497 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Arhgap5P97393 1501 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Il16O54824 1322 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Sv2bQ8BG39 683 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 KinQ8K339 391 aa15.24■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Cog6Q8R3I3 657 aa15.23■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Bcl2l13P59017 434 aa15.23■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Top2bQ64511 1612 aa15.23■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Kif4P33174 1231 aa15.22■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Pabpn1Q8CCS6 302 aaKnown RBP15.22■□□□□ 0.03
Sdf4-201ENSMUST00000050078 A2mQ6GQT1 1474 aa15.21■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Smc3Q9CW03 1217 aaKnown RBP15.21■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Cyp46a1Q9WVK8 500 aa15.21■□□□□ 0.03
Sdf4-201ENSMUST00000050078 Neurod6P48986 337 aa15.21■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Ccdc171E9Q1U1 1324 aa15.2■□□□□ 0.02
Sdf4-201ENSMUST00000050078 FanciQ8K368 1330 aa15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms