RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Pak3Q61036 559 aa16.46■□□□□ 0.23
Notch1-201ENSMUST00000028288 Ddx11Q6AXC6 880 aa16.46■□□□□ 0.23
Notch1-201ENSMUST00000028288 Arhgap5P97393 1501 aa16.46■□□□□ 0.23
Notch1-201ENSMUST00000028288 Drc7Q6V3W6 876 aa16.46■□□□□ 0.22
Notch1-201ENSMUST00000028288 Tpm2P58774 284 aa16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Shroom4Q1W617 1475 aa16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Phldb1Q6PDH0 1371 aaKnown RBP16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Phactr2B1AVP0 632 aa16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Polr3gQ6NXY9 223 aa16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 BccipQ9CWI3 316 aa16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Srek1Q8BZX4 494 aaKnown RBP16.45■□□□□ 0.22
Notch1-201ENSMUST00000028288 Mink1Q9JM52 1308 aa16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 Pank1Q8K4K6 548 aa16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 Chmp4cQ9D7F7 232 aa16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 Pknox2Q8BG99 474 aa16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 ErbinQ80TH2 1402 aa16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 LrpprcQ6PB66 1392 aaKnown RBP16.44■□□□□ 0.22
Notch1-201ENSMUST00000028288 Bicd2Q921C5 820 aa16.43■□□□□ 0.22
Notch1-201ENSMUST00000028288 Ccdc30Q8BVF4 654 aa16.43■□□□□ 0.22
Notch1-201ENSMUST00000028288 Arid4aF8VPQ2 1261 aaKnown RBP16.43■□□□□ 0.22
Notch1-201ENSMUST00000028288 Samd1D3YXK1 519 aa16.42■□□□□ 0.22
Notch1-201ENSMUST00000028288 Krt82Q99M74 516 aa16.42■□□□□ 0.22
Notch1-201ENSMUST00000028288 Tiam1Q60610 1591 aa16.42■□□□□ 0.22
Notch1-201ENSMUST00000028288 Rab11fip3Q8CHD8 1047 aa16.41■□□□□ 0.22
Notch1-201ENSMUST00000028288 Kri1Q8VDQ9 704 aaKnown RBP16.41■□□□□ 0.22
Notch1-201ENSMUST00000028288 Rpgrip1lQ8CG73 1264 aa16.41■□□□□ 0.22
Notch1-201ENSMUST00000028288 Prkrip1Q9CWV6 186 aaKnown RBP16.41■□□□□ 0.22
Notch1-201ENSMUST00000028288 Dixdc1Q80Y83 711 aa16.41■□□□□ 0.22
Notch1-201ENSMUST00000028288 AampJ3QN89 436 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 KarsQ99MN1 595 aaKnown RBP16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Ncapd3Q6ZQK0 1506 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Fam193aQ8CGI1 1231 aaKnown RBP16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Hmgn5Q9JL35 406 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Rec8Q8C5S7 591 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Hmox1P14901 289 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Gpatch3Q8BIY1 525 aa16.4■□□□□ 0.22
Notch1-201ENSMUST00000028288 Gprasp1Q5U4C1 1347 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 MlecQ6ZQI3 291 aaKnown RBP16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 Rsph4aQ8BYM7 716 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 FosbP13346 338 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 Zrsr2Q62377 462 aaKnown RBP16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 Shq1Q7TMX5 569 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 Rnf20Q5DTM8 973 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 IbspQ61711 324 aa16.39■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ccdc34Q3UI66 367 aa16.38■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ccdc183A2AJB1 534 aa16.38■□□□□ 0.21
Notch1-201ENSMUST00000028288 Cplx1P63040 134 aa16.38■□□□□ 0.21
Notch1-201ENSMUST00000028288 Q9D2X8 372 aa16.38■□□□□ 0.21
Notch1-201ENSMUST00000028288 A0A1L1SQF0 893 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Evc2Q8K1G2 1220 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Usp16Q99LG0 825 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Smc3Q9CW03 1217 aaKnown RBP16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Arhgef5E9Q7D5 1581 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Noc3lQ8VI84 807 aaKnown RBP16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ift140E9PY46 1464 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ric3Q8BPM6 367 aa16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Znhit6Q3UFB2 460 aaKnown RBP16.37■□□□□ 0.21
Notch1-201ENSMUST00000028288 Tdrd9Q14BI7 1383 aa16.36■□□□□ 0.21
Notch1-201ENSMUST00000028288 Atl3Q91YH5 541 aa16.36■□□□□ 0.21
Notch1-201ENSMUST00000028288 Znf710Q3U288 666 aa16.36■□□□□ 0.21
Notch1-201ENSMUST00000028288 Dhx29Q6PGC1 1365 aaKnown RBP16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Mad1l1Q9WTX8 717 aaKnown RBP16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ccdc173A0JLY1 547 aa16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Smc4Q8CG47 1286 aa16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 PhaxQ9JJT9 385 aaKnown RBP16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ubap1lG3UW59 384 aa16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Pnmal2G3X9N3 661 aa16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Hook1Q8BIL5 728 aa16.35■□□□□ 0.21
Notch1-201ENSMUST00000028288 Ipo7Q9EPL8 1038 aaKnown RBP16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Nutm1Q8BHP2 1126 aa16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Gm21190A0A0G2JGJ6 266 aa16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Pdcl3Q8BVF2 240 aa16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Neurod6P48986 337 aa16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Hnrnpul1Q8VDM6 859 aaKnown RBP16.34■□□□□ 0.21
Notch1-201ENSMUST00000028288 Gcom1E9PZ54 550 aa16.33■□□□□ 0.21
Notch1-201ENSMUST00000028288 MyzapQ3UIJ9 466 aa16.33■□□□□ 0.21
Notch1-201ENSMUST00000028288 Erc2Q6PH08 957 aa16.33■□□□□ 0.2
Notch1-201ENSMUST00000028288 Cplx2P84086 134 aa16.33■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ttll13A4Q9F6 804 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 EzrP26040 586 aaKnown RBP16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Nectin2P32507 530 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Top2bQ64511 1612 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 A0A0U1RNP2 1173 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Gsto1O09131 240 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Chmp7Q8R1T1 451 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 PogkQ80TC5 607 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Nsd2Q8BVE8 1365 aa16.32■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ciz1Q8VEH2 845 aa16.31■□□□□ 0.2
Notch1-201ENSMUST00000028288 Gnai1B2RSH2 354 aa16.31■□□□□ 0.2
Notch1-201ENSMUST00000028288 Cetn4Q8K4K1 168 aa16.31■□□□□ 0.2
Notch1-201ENSMUST00000028288 Gnai3Q9DC51 354 aa16.31■□□□□ 0.2
Notch1-201ENSMUST00000028288 Rab3gap2Q8BMG7 1366 aa16.31■□□□□ 0.2
Notch1-201ENSMUST00000028288 Soga1E1U8D0 1418 aa16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Rbm25B2RY56 838 aaKnown RBP16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 PrkcshO08795 521 aa16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Plcd4Q8K3R3 807 aa16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Anp32eP97822 260 aaKnown RBP16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Cyp46a1Q9WVK8 500 aa16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Arap1Q4LDD4 1452 aa16.3■□□□□ 0.2
Notch1-201ENSMUST00000028288 Nek4Q9Z1J2 792 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms