RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	MRPL28	P36527	147 aa		1	□□□□□ -2.25
SWS2	YNL081C	UMP1	P38293	148 aa		1	□□□□□ -2.25
SWS2	YNL081C	URA8	P38627	578 aa	Predicted RBP	1	□□□□□ -2.25
SWS2	YNL081C	IRC22	P40006	225 aa		1	□□□□□ -2.25
SWS2	YNL081C	COX15	P40086	486 aa		1	□□□□□ -2.25
SWS2	YNL081C	RPC17	P47076	161 aa		1	□□□□□ -2.25
SWS2	YNL081C	DOC1	P53068	250 aa		1	□□□□□ -2.25
SWS2	YNL081C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1	□□□□□ -2.25	not detected
SWS2	YNL081C	CDC123	Q05791	360 aa		1	□□□□□ -2.25
SWS2	YNL081C	YDL180W	Q12301	547 aa		1	□□□□□ -2.25
SWS2	YNL081C	CDC28	P00546	298 aa	Known RBP	0.99	□□□□□ -2.25
SWS2	YNL081C	SNC2	P33328	115 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	TVP38	P36164	337 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	YBR209W	P38311	105 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	YER076C	P40049	302 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	YER085C	P40058	173 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	RNH1	Q04740	348 aa		0.99	□□□□□ -2.25
SWS2	YNL081C	THP2	O13539	261 aa	Known RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	RHO1	P06780	209 aa	Known RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	YLR156W	P0CE96	114 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	YLR159W	P0CE97	114 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	YLR161W	P0CE98	114 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	YMR31	P19955	123 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	RPL24B	P24000	155 aa	Known RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	PPA2	P28239	310 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	VMA6	P32366	345 aa	Known RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	SRY1	P36007	326 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	POP4	P38336	279 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	MIC12	P38341	106 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	RIO2	P40160	425 aa	Known RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	ERJ5	P43613	295 aa	Predicted RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	ALG13	P53178	202 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	CUS2	P53830	285 aa	Predicted RBP	0.98	□□□□□ -2.25
SWS2	YNL081C	YDR248C	Q03786	193 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	TDA8	Q6B2U8	126 aa		0.98	□□□□□ -2.25
SWS2	YNL081C	RPL28	P02406	149 aa	Known RBP	0.97	□□□□□ -2.25
SWS2	YNL081C	SKG1	P36169	355 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	BXI1	P48558	297 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	RPL37A	P49166	88 aa	Known RBP	0.97	□□□□□ -2.25
SWS2	YNL081C	MIC26	P50087	233 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	BRR6	P53062	197 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	PRM8	P53174	237 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	GAS3	Q03655	524 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	YMR007W	Q03675	126 aa		0.97	□□□□□ -2.25
SWS2	YNL081C	DBF2	P22204	572 aa		0.96	□□□□□ -2.26
SWS2	YNL081C	FAR7	P43592	221 aa		0.96	□□□□□ -2.26
SWS2	YNL081C	YNR077C	P53758	84 aa		0.96	□□□□□ -2.26
SWS2	YNL081C	POP3	P53833	195 aa	Predicted RBP	0.96	□□□□□ -2.26
SWS2	YNL081C	SWP1	Q02795	286 aa		0.96	□□□□□ -2.26
SWS2	YNL081C	TSC3	Q3E790	80 aa		0.96	□□□□□ -2.26
SWS2	YNL081C	MSB2	P32334	1306 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	TUS1	Q06412	1307 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	TIM9	O74700	87 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	KDX1	P36005	433 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	MRPL17	P36528	281 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	GCN20	P43535	752 aa	Known RBP	0.95	□□□□□ -2.26
SWS2	YNL081C	EAF6	P47128	113 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	RUD3	Q12234	484 aa	Known RBP	0.95	□□□□□ -2.26
SWS2	YNL081C	YNL146C-A	Q3E7Z1	64 aa		0.95	□□□□□ -2.26
SWS2	YNL081C	JIP3	O13555	125 aa		0.94	□□□□□ -2.26
SWS2	YNL081C	ARG80	P07249	177 aa		0.94	□□□□□ -2.26
SWS2	YNL081C	YBR121C-A	P0C5L4	52 aa		0.94	□□□□□ -2.26
SWS2	YNL081C	NHP6B	P11633	99 aa	Known RBP	0.94	□□□□□ -2.26
SWS2	YNL081C	BMH2	P34730	273 aa	Known RBP	0.94	□□□□□ -2.26
SWS2	YNL081C	APS1	P35181	156 aa		0.94	□□□□□ -2.26
SWS2	YNL081C	RMD6	P39975	231 aa		0.94	□□□□□ -2.26
SWS2	YNL081C	RTR1	P40084	226 aa	Predicted RBP	0.94	□□□□□ -2.26
SWS2	YNL081C	FSF1	Q12029	327 aa	Known RBP	0.94	□□□□□ -2.26
SWS2	YNL081C	PDR18	P53756	1333 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	RPB4	P20433	221 aa	Predicted RBP	0.93	□□□□□ -2.26
SWS2	YNL081C	YKT6	P36015	200 aa	Known RBP	0.93	□□□□□ -2.26
SWS2	YNL081C	GVP36	P40531	326 aa	Known RBP	0.93	□□□□□ -2.26
SWS2	YNL081C	MSS2	P40990	351 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	OTU1	P43558	301 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	KNH1	P50112	268 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	GPM2	Q12008	311 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	MCP1	Q12106	302 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	JLP1	Q12358	412 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	ADF1	Q2V2Q1	113 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	YKL183C-A	Q3E765	70 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	SEY1	Q99287	776 aa		0.93	□□□□□ -2.26
SWS2	YNL081C	GCN3	P14741	305 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	PBN1	P25580	416 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	NTG1	P31378	399 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	SEC17	P32602	292 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	PTM1	P32857	523 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	CBT1	P36038	271 aa	Predicted RBP	0.92	□□□□□ -2.26
SWS2	YNL081C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
SWS2	YNL081C	UTP30	P36144	274 aa	Known RBP	0.92	□□□□□ -2.26
SWS2	YNL081C	RTC3	P38804	111 aa	Predicted RBP	0.92	□□□□□ -2.26
SWS2	YNL081C	AST2	P39945	430 aa	Known RBP	0.92	□□□□□ -2.26
SWS2	YNL081C	YEL067C	P39978	195 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	ERG28	P40030	148 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	ADO1	P47143	340 aa	Known RBP	0.92	□□□□□ -2.26
SWS2	YNL081C	GIS3	Q12418	502 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	YHR214C-E	Q8TGK0	99 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	ATG40	Q99325	256 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	CHD1	P32657	1468 aa		0.92	□□□□□ -2.26
SWS2	YNL081C	YER188C-A	P0C0V2	99 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	URA5	P13298	226 aa	Known RBP	0.91	□□□□□ -2.26

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