RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	COS6	P53344	381 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	AKR2	Q12013	749 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	VPS68	Q12016	184 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	PSF1	Q12488	208 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	SAC3	P46674	1301 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	CDC8	P00572	216 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	YLR156W	P0CE96	114 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	YLR159W	P0CE97	114 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	YLR161W	P0CE98	114 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	GRX2	P17695	143 aa	Known RBP	0.86	□□□□□ -2.27
SPT21	YMR179W	SNF6	P18888	332 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	ATG22	P25568	528 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	POP4	P38336	279 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	MMS2	P53152	137 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	YGR050C	P53231	118 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	GAS3	Q03655	524 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	TRM12	Q04235	462 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	YHR214C-E	Q8TGK0	99 aa		0.86	□□□□□ -2.27
SPT21	YMR179W	REP2	P03872	296 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	CDC7	P06243	507 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	SEC17	P32602	292 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	PTM1	P32857	523 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	UTP30	P36144	274 aa	Known RBP	0.85	□□□□□ -2.27
SPT21	YMR179W	RMD6	P39975	231 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	YIL001W	P40560	513 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	LSM7	P53905	115 aa	Known RBP	0.85	□□□□□ -2.27
SPT21	YMR179W	ARR2	Q06597	130 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	YOL160W	Q08321	113 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	MDM32	Q12171	622 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	MHT1	Q12525	324 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	RPL25	P04456	142 aa	Known RBP	0.85	□□□□□ -2.27
SPT21	YMR179W	MSW1	P04803	379 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	PUT1	P09368	476 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	ATP7	P30902	174 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	MNN5	P46982	586 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	AIM25	P47140	327 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	COG5	P53951	403 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	GGA1	Q06336	557 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	YNG1	Q08465	219 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	MCP1	Q12106	302 aa		0.85	□□□□□ -2.27
SPT21	YMR179W	YOR062C	P36025	268 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	SKG1	P36169	355 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	YHR180W	P38868	163 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	AST2	P39945	430 aa	Known RBP	0.84	□□□□□ -2.27
SPT21	YMR179W	PRM10	P42946	383 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	HOP2	P53187	214 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	NEJ1	Q06148	342 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	GPM2	Q12008	311 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	YPL162C	Q12042	273 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	USB1	Q12208	290 aa	Known RBP	0.84	□□□□□ -2.27
SPT21	YMR179W	ATO3	Q12359	275 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	EMC6	Q12431	108 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	YFR032C-B	Q8TGU2	87 aa		0.84	□□□□□ -2.27
SPT21	YMR179W	MRS1	P07266	363 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	KSS1	P14681	368 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	HMF1	P40037	129 aa	Known RBP	0.84	□□□□□ -2.28
SPT21	YMR179W	YGR219W	P53307	113 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	SWP1	Q02795	286 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	PRM15	Q03262	622 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	ARO80	Q04052	950 aa		0.84	□□□□□ -2.28
SPT21	YMR179W	FKS1	P38631	1876 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	TIM9	O74700	87 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	SIR2	P06700	562 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	RPB3	P16370	318 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	MAG1	P22134	296 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	BET1	P22804	142 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
SPT21	YMR179W	MRPL17	P36528	281 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	EGD2	P38879	174 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	SEC72	P39742	193 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	ERG10	P41338	398 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	CIS3	P47001	227 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	AIF1	P52923	378 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	YNR062C	P53748	327 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	CGI121	Q03705	181 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	YDR249C	Q03787	373 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	MRPS8	Q03799	155 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	SPG3	Q04398	127 aa	Predicted RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	IGO2	Q9P305	131 aa		0.83	□□□□□ -2.28
SPT21	YMR179W	IKI3	Q06706	1349 aa	Known RBP	0.83	□□□□□ -2.28
SPT21	YMR179W	URA5	P13298	226 aa	Known RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	CNB1	P25296	175 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	TAH1	P25638	111 aa	Predicted RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	MEI4	P29467	408 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	CAF4	P36130	643 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	SHG1	P38337	142 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	YER034W	P40022	185 aa	Known RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	PGD1	P40356	397 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	NOC4	Q06512	552 aa	Predicted RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	GRE1	Q08969	168 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	MBF1	O14467	151 aa	Known RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	SCL1	P21243	252 aa	Known RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	ATP15	P21306	62 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	MRPS28	P21771	286 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	PEX4	P29340	183 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	UMP1	P38293	148 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	ERV15	P38312	142 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	GLE2	P40066	365 aa		0.82	□□□□□ -2.28
SPT21	YMR179W	PDS1	P40316	373 aa	Predicted RBP	0.82	□□□□□ -2.28
SPT21	YMR179W	POG1	P40473	351 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms