RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	SAS5	Q99314	248 aa		1.27	□□□□□ -2.21
PKR1	YMR123W	SGA1	P08019	549 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	PUT1	P09368	476 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	YKR104W	P0CE69	306 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	CCA1	P21269	546 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	DOA4	P32571	926 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	TAF14	P35189	244 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	YKT6	P36015	200 aa	Known RBP	1.26	□□□□□ -2.21
PKR1	YMR123W	YEL028W	P39989	153 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	AYR1	P40471	297 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	SNX4	P47057	423 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	TIM13	P53299	105 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	AAH1	P53909	347 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	ASI3	P53983	676 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	SDO1	Q07953	250 aa	Known RBP	1.26	□□□□□ -2.21
PKR1	YMR123W	YOL024W	Q08172	172 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	HFA1	P32874	2273 aa		1.26	□□□□□ -2.21
PKR1	YMR123W	BRR2	P32639	2163 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	DYN1	P36022	4092 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	RPL24A	P04449	155 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	RPL22A	P05749	121 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	SCL1	P21243	252 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	SEC22	P22214	214 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	YCL042W	P25572	119 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	JEN1	P36035	616 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	EBP2	P36049	427 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	CYC2	P38909	366 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	SMD3	P43321	101 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	SNZ3	P43545	298 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	JHD2	P47156	728 aa	Predicted RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	SNZ2	P53824	298 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	GRX8	Q05926	109 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	SWC7	Q06707	132 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	COQ10	Q08058	207 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	OCA6	Q12454	224 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	EFG1	Q3E705	233 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	YPL229W	Q99395	206 aa		1.25	□□□□□ -2.21
PKR1	YMR123W	POL2	P21951	2222 aa	Known RBP	1.25	□□□□□ -2.21
PKR1	YMR123W	COX5A	P00424	153 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	CPA1	P07258	411 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	BCY1	P07278	416 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	RSR1	P13856	272 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	HOM6	P31116	359 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	YUH1	P35127	236 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	YET1	P35723	206 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	PRS4	P38063	326 aa	Predicted RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	GOS1	P38736	223 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	LSM4	P40070	187 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	RPL10	P41805	221 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	OST2	P46964	130 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	TRM9	P49957	279 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.24	□□□□□ -2.21	not detected
PKR1	YMR123W	ADH6	Q04894	360 aa	Known RBP	1.24	□□□□□ -2.21
PKR1	YMR123W	LDB18	Q07887	179 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	YLR030W	Q07967	263 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	BTS1	Q12051	335 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	SEY1	Q99287	776 aa		1.24	□□□□□ -2.21
PKR1	YMR123W	MEI4	P29467	408 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	MRPL15	P36523	253 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	AIM18	P38884	321 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	PET100	P38958	111 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	YHB1	P39676	399 aa	Known RBP	1.23	□□□□□ -2.21
PKR1	YMR123W	PHB1	P40961	287 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	BNA6	P43619	295 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	YNL247W	P53852	767 aa	Known RBP	1.23	□□□□□ -2.21
PKR1	YMR123W	RHO3	Q00245	231 aa	Known RBP	1.23	□□□□□ -2.21
PKR1	YMR123W	SLD7	Q08457	257 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	MSH5	Q12175	901 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	YBL008W-A	Q3E821	79 aa		1.23	□□□□□ -2.21
PKR1	YMR123W	DDP1	Q99321	188 aa	Known RBP	1.23	□□□□□ -2.21
PKR1	YMR123W	MDM35	O60200	86 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YHR032W-A	P0C5N6	59 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	MRP1	P10662	321 aa	Known RBP	1.22	□□□□□ -2.21
PKR1	YMR123W	PRP18	P33411	251 aa	Predicted RBP	1.22	□□□□□ -2.21
PKR1	YMR123W	MSA2	P36157	363 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	MAK5	P38112	773 aa	Predicted RBP	1.22	□□□□□ -2.21
PKR1	YMR123W	LDB7	P38210	180 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	CTR2	P38865	189 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YEL073C	P39974	107 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YIL086C	P40503	102 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	RPC17	P47076	161 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YDR278C	Q05612	105 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YPR147C	Q06522	304 aa	Known RBP	1.22	□□□□□ -2.21
PKR1	YMR123W	MSA1	Q08471	629 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	BBP1	Q12365	385 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	ATG31	Q12421	196 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	SNF8	Q12483	233 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	MHT1	Q12525	324 aa		1.22	□□□□□ -2.21
PKR1	YMR123W	YHR139C-A	O13536	103 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	MGM101	P32787	269 aa	Known RBP	1.21	□□□□□ -2.22
PKR1	YMR123W	DOG1	P38774	246 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	GIM4	P40005	111 aa	Known RBP	1.21	□□□□□ -2.22
PKR1	YMR123W	PEP8	P40335	379 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	HYR1	P40581	163 aa	Known RBP	1.21	□□□□□ -2.22
PKR1	YMR123W	CUP9	P41817	306 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	USE1	P53146	245 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	MRH4	P53166	561 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	PET117	Q02771	107 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	PRM15	Q03262	622 aa		1.21	□□□□□ -2.22
PKR1	YMR123W	YDR209C	Q03480	137 aa		1.21	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms