RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C CDC10P25342 322 aaKnown RBP0.13□□□□□ -2.39
VPS20YMR077C SRB4P32569 687 aa0.13□□□□□ -2.39
VPS20YMR077C OPY1P38271 328 aa0.13□□□□□ -2.39
VPS20YMR077C PRE6P40303 254 aaKnown RBP0.13□□□□□ -2.39
VPS20YMR077C YJR149WP47177 404 aa0.13□□□□□ -2.39
VPS20YMR077C YNL247WP53852 767 aaKnown RBP0.13□□□□□ -2.39
VPS20YMR077C CWC27Q02770 301 aa0.13□□□□□ -2.39
VPS20YMR077C SWP1Q02795 286 aa0.13□□□□□ -2.39
VPS20YMR077C ACC1Q00955 2233 aaKnown RBP0.13□□□□□ -2.39
VPS20YMR077C DRS2P39524 1355 aa0.12□□□□□ -2.39
VPS20YMR077C YLR236CA0A023PZG4 107 aa0.12□□□□□ -2.39
VPS20YMR077C TIM9O74700 87 aa0.12□□□□□ -2.39
VPS20YMR077C MRPL28P36527 147 aa0.12□□□□□ -2.39
VPS20YMR077C HOC1P47124 396 aa0.12□□□□□ -2.39
VPS20YMR077C MCM22P47167 239 aa0.12□□□□□ -2.39
VPS20YMR077C TRM9P49957 279 aa0.12□□□□□ -2.39
VPS20YMR077C GPM2Q12008 311 aa0.12□□□□□ -2.39
VPS20YMR077C YOL107WQ12239 342 aa0.12□□□□□ -2.39
VPS20YMR077C SEC11P15367 167 aa0.11□□□□□ -2.39
VPS20YMR077C GVP36P40531 326 aaKnown RBP0.11□□□□□ -2.39
VPS20YMR077C NSA1P53136 463 aaPredicted RBP0.11□□□□□ -2.39
VPS20YMR077C DID2P69771 204 aa0.11□□□□□ -2.39
VPS20YMR077C YML108WQ03759 105 aa0.11□□□□□ -2.39
VPS20YMR077C YHR007C-AQ07074 71 aa0.11□□□□□ -2.39
VPS20YMR077C YOL160WQ08321 113 aa0.11□□□□□ -2.39
VPS20YMR077C LSO2Q3E772 92 aaKnown RBP0.11□□□□□ -2.39
VPS20YMR077C OM45P16547 393 aa0.1□□□□□ -2.39
VPS20YMR077C DBF2P22204 572 aa0.1□□□□□ -2.39
VPS20YMR077C YCL042WP25572 119 aa0.1□□□□□ -2.39
VPS20YMR077C STP22P25604 385 aa0.1□□□□□ -2.39
VPS20YMR077C YHL042WP38729 150 aa0.1□□□□□ -2.39
VPS20YMR077C VMA22P38784 181 aa0.1□□□□□ -2.39
VPS20YMR077C RTT105P40063 208 aa0.1□□□□□ -2.39
VPS20YMR077C CUE4Q04201 117 aaPredicted RBP0.1□□□□□ -2.39
VPS20YMR077C LCL2Q08045 131 aa0.1□□□□□ -2.39
VPS20YMR077C RAD28Q12021 506 aa0.1□□□□□ -2.39
VPS20YMR077C SHE2P36068 246 aaKnown RBP RIP-Chip data0.09□□□□□ -2.4not detected
VPS20YMR077C YBR285WP38354 144 aa0.09□□□□□ -2.4
VPS20YMR077C HYR1P40581 163 aaKnown RBP0.09□□□□□ -2.4
VPS20YMR077C TDA8Q6B2U8 126 aa0.09□□□□□ -2.4
VPS20YMR077C SKG1P36169 355 aa0.08□□□□□ -2.4
VPS20YMR077C YFH7P43591 353 aa0.08□□□□□ -2.4
VPS20YMR077C BNA6P43619 295 aa0.08□□□□□ -2.4
VPS20YMR077C PRM8P53174 237 aa0.08□□□□□ -2.4
VPS20YMR077C DIG2Q03373 323 aaKnown RBP0.08□□□□□ -2.4
VPS20YMR077C YMR252CQ04814 134 aa0.08□□□□□ -2.4
VPS20YMR077C MCP1Q12106 302 aa0.08□□□□□ -2.4
VPS20YMR077C CUE1P38428 203 aa0.07□□□□□ -2.4
VPS20YMR077C YPL073CP40323 161 aa0.07□□□□□ -2.4
VPS20YMR077C YDR274CP87283 123 aa0.07□□□□□ -2.4
VPS20YMR077C YRA1Q12159 226 aaKnown RBP0.07□□□□□ -2.4
VPS20YMR077C MDM35O60200 86 aa0.06□□□□□ -2.4
VPS20YMR077C CDC36P06100 191 aaPredicted RBP0.06□□□□□ -2.4
VPS20YMR077C BCY1P07278 416 aaKnown RBP0.06□□□□□ -2.4
VPS20YMR077C SEC17P32602 292 aa0.06□□□□□ -2.4
VPS20YMR077C NTF2P33331 125 aaKnown RBP0.06□□□□□ -2.4
VPS20YMR077C YEL008WP40001 126 aa0.06□□□□□ -2.4
VPS20YMR077C YEA4P40004 342 aa0.06□□□□□ -2.4
VPS20YMR077C MRPL50P53724 139 aa0.06□□□□□ -2.4
VPS20YMR077C PAM18Q07914 168 aa0.06□□□□□ -2.4
VPS20YMR077C PRP8P33334 2413 aaKnown RBP0.06□□□□□ -2.4
VPS20YMR077C MRPL25P23369 157 aa0.05□□□□□ -2.4
VPS20YMR077C RPT5P33297 434 aaKnown RBP0.05□□□□□ -2.4
VPS20YMR077C UTP30P36144 274 aaKnown RBP0.05□□□□□ -2.4
VPS20YMR077C YNL134CP53912 376 aaKnown RBP0.05□□□□□ -2.4
VPS20YMR077C YLR460CP54007 376 aa0.05□□□□□ -2.4
VPS20YMR077C YIL177CP40434 1758 aa0.04□□□□□ -2.4
VPS20YMR077C YJL225CP40889 1758 aa0.04□□□□□ -2.4
VPS20YMR077C YER034WP40022 185 aaKnown RBP0.04□□□□□ -2.4
VPS20YMR077C KRE28Q04431 385 aa0.04□□□□□ -2.4
VPS20YMR077C CDC123Q05791 360 aa0.04□□□□□ -2.4
VPS20YMR077C KAP95Q06142 861 aaKnown RBP0.04□□□□□ -2.4
VPS20YMR077C YPR174CQ06616 221 aaPredicted RBP0.04□□□□□ -2.4
VPS20YMR077C ATG31Q12421 196 aa0.04□□□□□ -2.4
VPS20YMR077C CDC28P00546 298 aaKnown RBP0.03□□□□□ -2.4
VPS20YMR077C SPT3P06844 337 aa0.03□□□□□ -2.4
VPS20YMR077C URA6P15700 204 aa0.03□□□□□ -2.4
VPS20YMR077C TCA17P32613 152 aa0.03□□□□□ -2.4
VPS20YMR077C UGX2P32772 223 aa0.03□□□□□ -2.4
VPS20YMR077C MGM101P32787 269 aaKnown RBP0.03□□□□□ -2.4
VPS20YMR077C LDB7P38210 180 aa0.03□□□□□ -2.4
VPS20YMR077C LIA1P47120 325 aaKnown RBP0.03□□□□□ -2.4
VPS20YMR077C RPL27AP0C2H6 136 aaKnown RBP0.02□□□□□ -2.41
VPS20YMR077C URA5P13298 226 aaKnown RBP0.02□□□□□ -2.41
VPS20YMR077C BET1P22804 142 aa0.02□□□□□ -2.41
VPS20YMR077C RIB7P33312 244 aa0.02□□□□□ -2.41
VPS20YMR077C APS1P35181 156 aa0.02□□□□□ -2.41
VPS20YMR077C TVP23P38962 199 aa0.02□□□□□ -2.41
VPS20YMR077C AST2P39945 430 aaKnown RBP0.02□□□□□ -2.41
VPS20YMR077C NUP84P52891 726 aa0.02□□□□□ -2.41
VPS20YMR077C YDR249CQ03787 373 aa0.02□□□□□ -2.41
VPS20YMR077C YLR173WQ06247 608 aa0.02□□□□□ -2.41
VPS20YMR077C COA3Q3E7B2 85 aa0.02□□□□□ -2.41
VPS20YMR077C RPO26P20435 155 aa0.01□□□□□ -2.41
VPS20YMR077C SPO13P23624 291 aa0.01□□□□□ -2.41
VPS20YMR077C BXI1P48558 297 aa0.01□□□□□ -2.41
VPS20YMR077C KSS1P14681 368 aa0□□□□□ -2.41
VPS20YMR077C ATP15P21306 62 aa0□□□□□ -2.41
VPS20YMR077C YHL018WP38744 120 aaPredicted RBP0□□□□□ -2.41
VPS20YMR077C RMD6P39975 231 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms