RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W IMP3P32899 183 aaPredicted RBP-0.08□□□□□ -2.42
PRP39YML046W YKL075CP36083 450 aa-0.08□□□□□ -2.42
PRP39YML046W GDT1P38301 280 aaPredicted RBP-0.08□□□□□ -2.42
PRP39YML046W VMA22P38784 181 aa-0.08□□□□□ -2.42
PRP39YML046W PRP39P39682 629 aaKnown RBP-0.08□□□□□ -2.42
PRP39YML046W YJL055WP47044 245 aa-0.08□□□□□ -2.42
PRP39YML046W TAF6P53040 516 aa-0.08□□□□□ -2.42
PRP39YML046W YNR062CP53748 327 aa-0.08□□□□□ -2.42
PRP39YML046W VPS60Q03390 229 aa-0.08□□□□□ -2.42
PRP39YML046W ECM18Q04623 453 aa-0.08□□□□□ -2.42
PRP39YML046W MCP1Q12106 302 aa-0.08□□□□□ -2.42
PRP39YML046W YPR011CQ12251 326 aa-0.08□□□□□ -2.42
PRP39YML046W PST2Q12335 198 aaKnown RBP-0.08□□□□□ -2.42
PRP39YML046W UTP23Q12339 254 aaKnown RBP-0.08□□□□□ -2.42
PRP39YML046W YMR105W-AQ8TGS8 64 aa-0.08□□□□□ -2.42
PRP39YML046W COX5AP00424 153 aa-0.09□□□□□ -2.42
PRP39YML046W CPA1P07258 411 aaKnown RBP-0.09□□□□□ -2.42
PRP39YML046W COS2P0CX12 379 aa-0.09□□□□□ -2.42
PRP39YML046W COS3P0CX13 379 aa-0.09□□□□□ -2.42
PRP39YML046W TCP1P12612 559 aaKnown RBP-0.09□□□□□ -2.42
PRP39YML046W VMA5P31412 392 aaKnown RBP-0.09□□□□□ -2.42
PRP39YML046W ERG2P32352 222 aa-0.09□□□□□ -2.42
PRP39YML046W CAJ1P39101 391 aa-0.09□□□□□ -2.42
PRP39YML046W SIP18P50263 79 aa-0.09□□□□□ -2.42
PRP39YML046W ERG25P53045 309 aa-0.09□□□□□ -2.42
PRP39YML046W MLC1P53141 149 aa-0.09□□□□□ -2.42
PRP39YML046W SGF11Q03067 99 aa-0.09□□□□□ -2.42
PRP39YML046W YPL039WQ03080 316 aa-0.09□□□□□ -2.42
PRP39YML046W YDR210WQ03482 75 aa-0.09□□□□□ -2.42
PRP39YML046W SPG3Q04398 127 aaPredicted RBP-0.09□□□□□ -2.42
PRP39YML046W CTR3Q06686 241 aa-0.09□□□□□ -2.42
PRP39YML046W RIO1Q12196 484 aaKnown RBP-0.09□□□□□ -2.42
PRP39YML046W SEY1Q99287 776 aa-0.09□□□□□ -2.42
PRP39YML046W YSF3P0C074 85 aaPredicted RBP-0.1□□□□□ -2.42
PRP39YML046W PHO85P17157 305 aa-0.1□□□□□ -2.42
PRP39YML046W URA8P38627 578 aaPredicted RBP-0.1□□□□□ -2.42
PRP39YML046W YEL073CP39974 107 aa-0.1□□□□□ -2.42
PRP39YML046W GIM4P40005 111 aaKnown RBP-0.1□□□□□ -2.42
PRP39YML046W VPS55P47111 140 aa-0.1□□□□□ -2.42
PRP39YML046W GEP7P53171 287 aa-0.1□□□□□ -2.42
PRP39YML046W PEX31P53203 462 aa-0.1□□□□□ -2.42
PRP39YML046W UTP6Q02354 440 aaKnown RBP-0.1□□□□□ -2.42
PRP39YML046W SNX41Q04053 625 aa-0.1□□□□□ -2.42
PRP39YML046W TRM12Q04235 462 aa-0.1□□□□□ -2.42
PRP39YML046W LOA1Q06508 300 aa-0.1□□□□□ -2.42
PRP39YML046W FIT2Q08906 153 aa-0.1□□□□□ -2.42
PRP39YML046W MRPS28P21771 286 aa-0.1□□□□□ -2.43
PRP39YML046W SPO13P23624 291 aa-0.1□□□□□ -2.43
PRP39YML046W TAH1P25638 111 aaPredicted RBP-0.1□□□□□ -2.43
PRP39YML046W HYM1P32464 399 aa-0.1□□□□□ -2.43
PRP39YML046W UPS2P35200 230 aa-0.1□□□□□ -2.43
PRP39YML046W YJL218WP40892 196 aaKnown RBP-0.1□□□□□ -2.43
PRP39YML046W SMD3P43321 101 aaKnown RBP-0.1□□□□□ -2.43
PRP39YML046W HAM1P47119 197 aaKnown RBP-0.1□□□□□ -2.43
PRP39YML046W UBC13P52490 153 aa-0.1□□□□□ -2.43
PRP39YML046W RVB1Q03940 463 aaKnown RBP-0.1□□□□□ -2.43
PRP39YML046W RAV2Q03956 351 aa-0.1□□□□□ -2.43
PRP39YML046W TFB5Q3E7C1 72 aaPredicted RBP-0.1□□□□□ -2.43
PRP39YML046W SAS5Q99314 248 aa-0.1□□□□□ -2.43
PRP39YML046W Q0255P03881 472 aa-0.11□□□□□ -2.43
PRP39YML046W DSF1P0CX08 502 aa-0.11□□□□□ -2.43
PRP39YML046W YNR073CP0CX09 502 aa-0.11□□□□□ -2.43
PRP39YML046W PEX4P29340 183 aa-0.11□□□□□ -2.43
PRP39YML046W FZF1P32805 299 aa-0.11□□□□□ -2.43
PRP39YML046W PRS4P38063 326 aaPredicted RBP-0.11□□□□□ -2.43
PRP39YML046W YPC1P38298 316 aa-0.11□□□□□ -2.43
PRP39YML046W RPL13BP40212 199 aaKnown RBP-0.11□□□□□ -2.43
PRP39YML046W MDM34P53083 459 aa-0.11□□□□□ -2.43
PRP39YML046W YGL149WP53116 101 aa-0.11□□□□□ -2.43
PRP39YML046W ERV29P53337 310 aa-0.11□□□□□ -2.43
PRP39YML046W RCE1Q03530 315 aa-0.11□□□□□ -2.43
PRP39YML046W YDR249CQ03787 373 aa-0.11□□□□□ -2.43
PRP39YML046W YHP1Q04116 353 aa-0.11□□□□□ -2.43
PRP39YML046W SXM1Q04175 944 aaKnown RBP-0.11□□□□□ -2.43
PRP39YML046W YDR278CQ05612 105 aa-0.11□□□□□ -2.43
PRP39YML046W YLR162WQ06235 118 aa-0.11□□□□□ -2.43
PRP39YML046W FYV12Q08559 129 aa-0.11□□□□□ -2.43
PRP39YML046W YOR114WQ12219 294 aa-0.11□□□□□ -2.43
PRP39YML046W SKS1Q12505 502 aa-0.11□□□□□ -2.43
PRP39YML046W RPL13AQ12690 199 aaPredicted RBP-0.11□□□□□ -2.43
PRP39YML046W REP2P03872 296 aa-0.12□□□□□ -2.43
PRP39YML046W AQY2P0CD90 149 aa-0.12□□□□□ -2.43
PRP39YML046W NMT1P14743 455 aa-0.12□□□□□ -2.43
PRP39YML046W ZRT1P32804 376 aa-0.12□□□□□ -2.43
PRP39YML046W PTM1P32857 523 aa-0.12□□□□□ -2.43
PRP39YML046W TCD1P38756 429 aa-0.12□□□□□ -2.43
PRP39YML046W CTR2P38865 189 aa-0.12□□□□□ -2.43
PRP39YML046W APS3P47064 194 aa-0.12□□□□□ -2.43
PRP39YML046W CUE3P53137 624 aaKnown RBP-0.12□□□□□ -2.43
PRP39YML046W RCF2P53721 224 aa-0.12□□□□□ -2.43
PRP39YML046W YLR460CP54007 376 aa-0.12□□□□□ -2.43
PRP39YML046W YMR279CQ03263 540 aa-0.12□□□□□ -2.43
PRP39YML046W YMR007WQ03675 126 aa-0.12□□□□□ -2.43
PRP39YML046W UPS1Q05776 175 aa-0.12□□□□□ -2.43
PRP39YML046W ARR2Q06597 130 aa-0.12□□□□□ -2.43
PRP39YML046W YPR174CQ06616 221 aaPredicted RBP-0.12□□□□□ -2.43
PRP39YML046W BRX1Q08235 291 aaKnown RBP-0.12□□□□□ -2.43
PRP39YML046W RRP42Q12277 265 aaPredicted RBP-0.12□□□□□ -2.43
PRP39YML046W YPR1Q12458 312 aa-0.12□□□□□ -2.43
PRP39YML046W MHF1Q3E835 90 aa-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms