RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W FUS3P16892 353 aaKnown RBP8.37□□□□□ -1.07
SHH4YLR164W OLE1P21147 510 aaKnown RBP8.37□□□□□ -1.07
SHH4YLR164W YPC1P38298 316 aa8.37□□□□□ -1.07
SHH4YLR164W CUE1P38428 203 aa8.37□□□□□ -1.07
SHH4YLR164W AIM46P38885 310 aa8.37□□□□□ -1.07
SHH4YLR164W RPA34P47006 233 aaPredicted RBP8.37□□□□□ -1.07
SHH4YLR164W YHC3P47040 408 aa8.37□□□□□ -1.07
SHH4YLR164W ORM1P53224 222 aa8.37□□□□□ -1.07
SHH4YLR164W YNL046WP53956 172 aa8.37□□□□□ -1.07
SHH4YLR164W YNG1Q08465 219 aa8.37□□□□□ -1.07
SHH4YLR164W BBP1Q12365 385 aa8.37□□□□□ -1.07
SHH4YLR164W MRP20P32387 263 aa8.36□□□□□ -1.07
SHH4YLR164W SIT1P39980 628 aa8.36□□□□□ -1.07
SHH4YLR164W RRT7Q07829 113 aa8.36□□□□□ -1.07
SHH4YLR164W YCL048W-AQ2V2Q2 79 aa8.36□□□□□ -1.07
SHH4YLR164W REC104P33323 182 aa8.35□□□□□ -1.07
SHH4YLR164W SRY1P36007 326 aa8.35□□□□□ -1.07
SHH4YLR164W PHM8P40025 321 aa8.35□□□□□ -1.07
SHH4YLR164W PRM5P40476 318 aa8.35□□□□□ -1.07
SHH4YLR164W YIL012WP40551 113 aa8.35□□□□□ -1.07
SHH4YLR164W TAD2P47058 250 aa8.35□□□□□ -1.07
SHH4YLR164W XPT1P47165 209 aa8.35□□□□□ -1.07
SHH4YLR164W VPS28Q02767 242 aa8.35□□□□□ -1.07
SHH4YLR164W DPB4Q04603 196 aaKnown RBP8.35□□□□□ -1.07
SHH4YLR164W LIP2Q06005 328 aa8.35□□□□□ -1.07
SHH4YLR164W YOR292CQ08743 309 aa8.35□□□□□ -1.07
SHH4YLR164W YUH1P35127 236 aa8.34□□□□□ -1.07
SHH4YLR164W SSO2P39926 295 aa8.34□□□□□ -1.07
SHH4YLR164W ECM27P47144 725 aa8.34□□□□□ -1.07
SHH4YLR164W JAC1P53193 184 aa8.34□□□□□ -1.07
SHH4YLR164W TIM10P87108 93 aa8.34□□□□□ -1.07
SHH4YLR164W RPL21AQ02753 160 aaKnown RBP8.34□□□□□ -1.07
SHH4YLR164W PML1Q07930 204 aaPredicted RBP8.34□□□□□ -1.07
SHH4YLR164W WSC3Q12215 556 aa8.34□□□□□ -1.07
SHH4YLR164W YCT1Q12235 531 aa8.34□□□□□ -1.07
SHH4YLR164W PRM4Q12498 284 aa8.34□□□□□ -1.07
SHH4YLR164W RPL21BQ12672 160 aaKnown RBP8.34□□□□□ -1.07
SHH4YLR164W RFC2P40348 353 aa8.33□□□□□ -1.08
SHH4YLR164W IRC24P40580 263 aa8.33□□□□□ -1.08
SHH4YLR164W EST3Q03096 181 aa8.33□□□□□ -1.08
SHH4YLR164W GMC1Q04399 608 aa8.33□□□□□ -1.08
SHH4YLR164W FMP16Q12497 93 aa8.33□□□□□ -1.08
SHH4YLR164W DBP2P24783 546 aaKnown RBP8.32□□□□□ -1.08
SHH4YLR164W VMA8P32610 256 aaKnown RBP8.32□□□□□ -1.08
SHH4YLR164W PCL7P40186 285 aa8.32□□□□□ -1.08
SHH4YLR164W BMT5P40493 336 aa8.32□□□□□ -1.08
SHH4YLR164W SGN1P40561 250 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
SHH4YLR164W NCA3P46955 337 aa8.32□□□□□ -1.08
SHH4YLR164W WSC2P53832 503 aa8.32□□□□□ -1.08
SHH4YLR164W NOC4Q06512 552 aaPredicted RBP8.32□□□□□ -1.08
SHH4YLR164W RTR2Q12378 196 aa8.32□□□□□ -1.08
SHH4YLR164W YBR255C-AQ3E776 120 aa8.32□□□□□ -1.08
SHH4YLR164W CPR5P35176 225 aa8.31□□□□□ -1.08
SHH4YLR164W ALG14P38242 237 aa8.31□□□□□ -1.08
SHH4YLR164W LAG1P38703 411 aa8.31□□□□□ -1.08
SHH4YLR164W OSH7P38755 437 aa8.31□□□□□ -1.08
SHH4YLR164W YJR012CP47087 207 aa8.31□□□□□ -1.08
SHH4YLR164W GEP7P53171 287 aa8.31□□□□□ -1.08
SHH4YLR164W MEH1Q02205 184 aa8.31□□□□□ -1.08
SHH4YLR164W ANT1Q06497 328 aa8.31□□□□□ -1.08
SHH4YLR164W ATG5Q12380 294 aa8.31□□□□□ -1.08
SHH4YLR164W MAG1P22134 296 aaKnown RBP8.3□□□□□ -1.08
SHH4YLR164W EMP24P32803 203 aaKnown RBP8.3□□□□□ -1.08
SHH4YLR164W PDC2P32896 925 aa8.3□□□□□ -1.08
SHH4YLR164W IKI1P38874 309 aa8.3□□□□□ -1.08
SHH4YLR164W YFH1Q07540 174 aa8.3□□□□□ -1.08
SHH4YLR164W DGK1Q12382 290 aa8.3□□□□□ -1.08
SHH4YLR164W Q0297Q9ZZV8 51 aa8.3□□□□□ -1.08
SHH4YLR164W ATP10P18496 279 aa8.29□□□□□ -1.08
SHH4YLR164W AIR1P40507 360 aaKnown RBP8.29□□□□□ -1.08
SHH4YLR164W RPS0BP46654 252 aaKnown RBP8.29□□□□□ -1.08
SHH4YLR164W SBH2P52871 88 aa8.29□□□□□ -1.08
SHH4YLR164W YGL117WP53133 265 aa8.29□□□□□ -1.08
SHH4YLR164W PNC1P53184 216 aaKnown RBP8.29□□□□□ -1.08
SHH4YLR164W YLR146W-AQ2V2P1 62 aa8.29□□□□□ -1.08
SHH4YLR164W COA2Q3E823 68 aa8.29□□□□□ -1.08
SHH4YLR164W NUM1Q00402 2748 aa8.28□□□□□ -1.08
SHH4YLR164W ERV15P38312 142 aa8.28□□□□□ -1.08
SHH4YLR164W SYG1P40528 902 aa8.28□□□□□ -1.08
SHH4YLR164W YIR020CP40575 100 aa8.28□□□□□ -1.08
SHH4YLR164W AGX1P43567 385 aa8.28□□□□□ -1.08
SHH4YLR164W TTI2P47168 421 aa8.28□□□□□ -1.08
SHH4YLR164W YNR064CP53750 290 aa8.28□□□□□ -1.08
SHH4YLR164W YIF1P53845 314 aaKnown RBP8.28□□□□□ -1.08
SHH4YLR164W YDL009CQ12210 107 aa8.28□□□□□ -1.08
SHH4YLR164W BOL1Q3E793 110 aa8.28□□□□□ -1.08
SHH4YLR164W ROX3P25046 220 aa8.27□□□□□ -1.09
SHH4YLR164W GAR1P28007 205 aaKnown RBP8.27□□□□□ -1.09
SHH4YLR164W COQ2P32378 372 aa8.27□□□□□ -1.09
SHH4YLR164W VMA7P39111 118 aa8.27□□□□□ -1.09
SHH4YLR164W MSO1P53604 210 aaKnown RBP8.27□□□□□ -1.09
SHH4YLR164W SMM1P53720 384 aaKnown RBP8.27□□□□□ -1.09
SHH4YLR164W INN1P53901 409 aa8.27□□□□□ -1.09
SHH4YLR164W DMA2P53924 522 aa8.27□□□□□ -1.09
SHH4YLR164W APJ1P53940 528 aa8.27□□□□□ -1.09
SHH4YLR164W GPI15P53961 229 aa8.27□□□□□ -1.09
SHH4YLR164W ACT1P60010 375 aaKnown RBP8.27□□□□□ -1.09
SHH4YLR164W ORM2Q06144 216 aa8.27□□□□□ -1.09
SHH4YLR164W BPH1P25356 2167 aa8.27□□□□□ -1.09
SHH4YLR164W GDH1P07262 454 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 170.6 ms