RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C Q0255P03881 472 aa1.29□□□□□ -2.2
HIR3YJR140C CMD1P06787 147 aaKnown RBP1.29□□□□□ -2.2
HIR3YJR140C SRP14P38985 146 aa1.29□□□□□ -2.2
HIR3YJR140C ALG13P53178 202 aa1.29□□□□□ -2.2
HIR3YJR140C YOL019WQ08157 551 aa1.29□□□□□ -2.2
HIR3YJR140C YER034WP40022 185 aaKnown RBP1.29□□□□□ -2.2
HIR3YJR140C PGU1P47180 361 aa1.29□□□□□ -2.2
HIR3YJR140C ERG25P53045 309 aa1.29□□□□□ -2.2
HIR3YJR140C LPP1Q04396 274 aa1.29□□□□□ -2.2
HIR3YJR140C ATG39Q06159 398 aa1.29□□□□□ -2.2
HIR3YJR140C CLP1Q08685 445 aaPredicted RBP1.29□□□□□ -2.2
HIR3YJR140C YPR011CQ12251 326 aa1.29□□□□□ -2.2
HIR3YJR140C AGC1Q12482 902 aa1.29□□□□□ -2.2
HIR3YJR140C MHT1Q12525 324 aa1.29□□□□□ -2.2
HIR3YJR140C IKI3Q06706 1349 aaKnown RBP1.29□□□□□ -2.2
HIR3YJR140C QCR2P07257 368 aa1.28□□□□□ -2.2
HIR3YJR140C BET1P22804 142 aa1.28□□□□□ -2.2
HIR3YJR140C ADE1P27616 306 aa1.28□□□□□ -2.2
HIR3YJR140C YBL081WP38180 368 aaKnown RBP1.28□□□□□ -2.2
HIR3YJR140C SUE1Q06524 206 aa1.28□□□□□ -2.2
HIR3YJR140C FEX1Q08913 375 aa1.28□□□□□ -2.2
HIR3YJR140C FEX2Q08991 375 aa1.28□□□□□ -2.2
HIR3YJR140C YLR053CQ12026 108 aa1.28□□□□□ -2.2
HIR3YJR140C CDC7P06243 507 aa1.28□□□□□ -2.2
HIR3YJR140C RAD10P06838 210 aa1.28□□□□□ -2.2
HIR3YJR140C MDH3P32419 343 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
HIR3YJR140C MDM34P53083 459 aa1.28□□□□□ -2.2
HIR3YJR140C TMA20P89886 181 aaPredicted RBP1.28□□□□□ -2.2
HIR3YJR140C YDR476CQ03362 224 aa1.28□□□□□ -2.2
HIR3YJR140C YBL112CQ3E7Y4 105 aa1.28□□□□□ -2.2
HIR3YJR140C RAD9P14737 1309 aa1.28□□□□□ -2.2
HIR3YJR140C SIR2P06700 562 aa1.28□□□□□ -2.2
HIR3YJR140C DPM1P14020 267 aaKnown RBP1.28□□□□□ -2.2
HIR3YJR140C VMA11P32842 164 aa1.28□□□□□ -2.2
HIR3YJR140C SHE2P36068 246 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
HIR3YJR140C YGR219WP53307 113 aa1.28□□□□□ -2.2
HIR3YJR140C NIP7Q08962 181 aaKnown RBP1.28□□□□□ -2.2
HIR3YJR140C CPA1P07258 411 aaKnown RBP1.28□□□□□ -2.21
HIR3YJR140C YPR170W-BP0C5R9 85 aa1.28□□□□□ -2.21
HIR3YJR140C TOS8P53147 276 aa1.28□□□□□ -2.21
HIR3YJR140C GIS2P53849 153 aaKnown RBP RIP-Chip data1.28□□□□□ -2.21not detected
HIR3YJR140C SWP1Q02795 286 aa1.28□□□□□ -2.21
HIR3YJR140C HNT1Q04344 158 aaKnown RBP1.28□□□□□ -2.21
HIR3YJR140C YPR195CQ06594 109 aa1.28□□□□□ -2.21
HIR3YJR140C YOR283WQ12040 230 aaKnown RBP1.28□□□□□ -2.21
HIR3YJR140C TOM40P23644 387 aaKnown RBP1.27□□□□□ -2.21
HIR3YJR140C AVT2P39981 480 aa1.27□□□□□ -2.21
HIR3YJR140C ICE2P40499 491 aa1.27□□□□□ -2.21
HIR3YJR140C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
HIR3YJR140C EMC6Q12431 108 aa1.27□□□□□ -2.21
HIR3YJR140C PSF1Q12488 208 aa1.27□□□□□ -2.21
HIR3YJR140C SWI1P09547 1314 aa1.27□□□□□ -2.21
HIR3YJR140C OAC1P32332 324 aa1.27□□□□□ -2.21
HIR3YJR140C SPS18P32572 300 aa1.27□□□□□ -2.21
HIR3YJR140C NUF2P33895 451 aa1.27□□□□□ -2.21
HIR3YJR140C UMP1P38293 148 aa1.27□□□□□ -2.21
HIR3YJR140C SVP26P38869 228 aa1.27□□□□□ -2.21
HIR3YJR140C LSM4P40070 187 aaKnown RBP1.27□□□□□ -2.21
HIR3YJR140C RPA43P46669 326 aa1.27□□□□□ -2.21
HIR3YJR140C YGR050CP53231 118 aa1.27□□□□□ -2.21
HIR3YJR140C YNL247WP53852 767 aaKnown RBP1.27□□□□□ -2.21
HIR3YJR140C NRK1P53915 240 aa1.27□□□□□ -2.21
HIR3YJR140C YMR315WQ04869 349 aaKnown RBP1.27□□□□□ -2.21
HIR3YJR140C TAH1P25638 111 aaPredicted RBP1.27□□□□□ -2.21
HIR3YJR140C YER134CP40081 178 aa1.27□□□□□ -2.21
HIR3YJR140C NUP49Q02199 472 aa1.27□□□□□ -2.21
HIR3YJR140C CDD1Q06549 142 aa1.27□□□□□ -2.21
HIR3YJR140C YOL024WQ08172 172 aa1.27□□□□□ -2.21
HIR3YJR140C PRM7Q12459 698 aa1.27□□□□□ -2.21
HIR3YJR140C TDA8Q6B2U8 126 aa1.27□□□□□ -2.21
HIR3YJR140C CNB1P25296 175 aa1.27□□□□□ -2.21
HIR3YJR140C RAD51P25454 400 aa1.27□□□□□ -2.21
HIR3YJR140C SPO73P40031 143 aa1.27□□□□□ -2.21
HIR3YJR140C PGD1P40356 397 aa1.27□□□□□ -2.21
HIR3YJR140C GON7P46984 123 aa1.27□□□□□ -2.21
HIR3YJR140C NEJ1Q06148 342 aa1.27□□□□□ -2.21
HIR3YJR140C YLR412C-AQ3E742 68 aa1.27□□□□□ -2.21
HIR3YJR140C IGO2Q9P305 131 aa1.27□□□□□ -2.21
HIR3YJR140C MBF1O14467 151 aaKnown RBP1.26□□□□□ -2.21
HIR3YJR140C MIG1P27705 504 aa1.26□□□□□ -2.21
HIR3YJR140C MAK5P38112 773 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C SKI6P46948 246 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C YJL144WP47009 104 aa1.26□□□□□ -2.21
HIR3YJR140C YLR179CQ06252 201 aaKnown RBP1.26□□□□□ -2.21
HIR3YJR140C NOC4Q06512 552 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C MRS1P07266 363 aa1.26□□□□□ -2.21
HIR3YJR140C RPB3P16370 318 aaKnown RBP1.26□□□□□ -2.21
HIR3YJR140C YET1P35723 206 aa1.26□□□□□ -2.21
HIR3YJR140C SRY1P36007 326 aa1.26□□□□□ -2.21
HIR3YJR140C TVP38P36164 337 aa1.26□□□□□ -2.21
HIR3YJR140C TDA4P47153 279 aa1.26□□□□□ -2.21
HIR3YJR140C COS6P53344 381 aa1.26□□□□□ -2.21
HIR3YJR140C YLR460CP54007 376 aa1.26□□□□□ -2.21
HIR3YJR140C YPL162CQ12042 273 aa1.26□□□□□ -2.21
HIR3YJR140C SCO1P23833 295 aa1.26□□□□□ -2.21
HIR3YJR140C UBC6P33296 250 aaPredicted RBP1.26□□□□□ -2.21
HIR3YJR140C YBR285WP38354 144 aa1.26□□□□□ -2.21
HIR3YJR140C IRC22P40006 225 aa1.26□□□□□ -2.21
HIR3YJR140C MNN5P46982 586 aa1.26□□□□□ -2.21
HIR3YJR140C AIF1P52923 378 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms