RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W ANT1Q06497 328 aa3.01□□□□□ -1.93
BCD1YHR040W MRX9Q07349 420 aaKnown RBP3.01□□□□□ -1.93
BCD1YHR040W ZEO1Q08245 113 aa3.01□□□□□ -1.93
BCD1YHR040W MCH4Q08268 501 aa3.01□□□□□ -1.93
BCD1YHR040W RDL2Q08742 149 aaKnown RBP3.01□□□□□ -1.93
BCD1YHR040W SCP1Q08873 200 aa3.01□□□□□ -1.93
BCD1YHR040W GRE1Q08969 168 aa3.01□□□□□ -1.93
BCD1YHR040W USB1Q12208 290 aaKnown RBP3.01□□□□□ -1.93
BCD1YHR040W PRP46Q12417 451 aaPredicted RBP3.01□□□□□ -1.93
BCD1YHR040W YBR298C-AQ8TGK4 73 aa3.01□□□□□ -1.93
BCD1YHR040W ODC2Q99297 307 aa3.01□□□□□ -1.93
BCD1YHR040W PET20Q99373 253 aa3.01□□□□□ -1.93
BCD1YHR040W YER145C-AA0A023PYF4 145 aa3□□□□□ -1.93
BCD1YHR040W YAL064W-BO13512 126 aa3□□□□□ -1.93
BCD1YHR040W OPI3P05375 206 aa3□□□□□ -1.93
BCD1YHR040W CDC36P06100 191 aaPredicted RBP3□□□□□ -1.93
BCD1YHR040W PRB1P09232 635 aa3□□□□□ -1.93
BCD1YHR040W STE18P18852 110 aa3□□□□□ -1.93
BCD1YHR040W RPB8P20436 146 aa3□□□□□ -1.93
BCD1YHR040W CKS1P20486 150 aaKnown RBP3□□□□□ -1.93
BCD1YHR040W SCO1P23833 295 aa3□□□□□ -1.93
BCD1YHR040W YCR101CP25607 182 aa3□□□□□ -1.93
BCD1YHR040W CPR3P25719 182 aa3□□□□□ -1.93
BCD1YHR040W ACP1P32463 125 aa3□□□□□ -1.93
BCD1YHR040W UMP1P38293 148 aa3□□□□□ -1.93
BCD1YHR040W LEU5P38702 357 aa3□□□□□ -1.93
BCD1YHR040W GEP4P38812 185 aa3□□□□□ -1.93
BCD1YHR040W LSM12P38828 187 aaKnown RBP3□□□□□ -1.93
BCD1YHR040W ASP1P38986 381 aaPredicted RBP3□□□□□ -1.93
BCD1YHR040W GCV3P39726 170 aaPredicted RBP3□□□□□ -1.93
BCD1YHR040W TIR3P40552 269 aa3□□□□□ -1.93
BCD1YHR040W CFD1P40558 293 aa3□□□□□ -1.93
BCD1YHR040W GLR1P41921 483 aaKnown RBP3□□□□□ -1.93
BCD1YHR040W PAM16P42949 149 aa3□□□□□ -1.93
BCD1YHR040W YDL186WP48568 277 aa3□□□□□ -1.93
BCD1YHR040W BRR6P53062 197 aa3□□□□□ -1.93
BCD1YHR040W YGR042WP53227 271 aa3□□□□□ -1.93
BCD1YHR040W ACT1P60010 375 aaKnown RBP3□□□□□ -1.93
BCD1YHR040W PET191Q02772 108 aa3□□□□□ -1.93
BCD1YHR040W YML018CQ03730 393 aa3□□□□□ -1.93
BCD1YHR040W YDR387CQ04162 555 aa3□□□□□ -1.93
BCD1YHR040W GAS2Q06135 555 aa3□□□□□ -1.93
BCD1YHR040W BER1Q06688 274 aaKnown RBP3□□□□□ -1.93
BCD1YHR040W YOL029CQ08187 201 aa3□□□□□ -1.93
BCD1YHR040W AKR2Q12013 749 aa3□□□□□ -1.93
BCD1YHR040W FCF2Q12035 217 aaPredicted RBP3□□□□□ -1.93
BCD1YHR040W ATP16Q12165 160 aa3□□□□□ -1.93
BCD1YHR040W YLR108CQ12259 485 aa3□□□□□ -1.93
BCD1YHR040W MCT1Q12283 360 aa3□□□□□ -1.93
BCD1YHR040W YHR213W-AQ8TGT4 77 aa3□□□□□ -1.93
BCD1YHR040W TDH3P00359 332 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
BCD1YHR040W FUS3P16892 353 aaKnown RBP2.99□□□□□ -1.93
BCD1YHR040W ZRC1P20107 442 aa2.99□□□□□ -1.93
BCD1YHR040W DAL82P21705 255 aa2.99□□□□□ -1.93
BCD1YHR040W YCR006CP25350 157 aa2.99□□□□□ -1.93
BCD1YHR040W PPA2P28239 310 aa2.99□□□□□ -1.93
BCD1YHR040W LDS1P31379 325 aa2.99□□□□□ -1.93
BCD1YHR040W MSK1P32048 576 aa2.99□□□□□ -1.93
BCD1YHR040W YPS1P32329 569 aa2.99□□□□□ -1.93
BCD1YHR040W YBL010CP32788 280 aa2.99□□□□□ -1.93
BCD1YHR040W SHO1P40073 367 aa2.99□□□□□ -1.93
BCD1YHR040W REE1P40893 198 aa2.99□□□□□ -1.93
BCD1YHR040W OTU1P43558 301 aa2.99□□□□□ -1.93
BCD1YHR040W YJL016WP47072 561 aa2.99□□□□□ -1.93
BCD1YHR040W AVT4P50944 713 aa2.99□□□□□ -1.93
BCD1YHR040W UFD1P53044 361 aa2.99□□□□□ -1.93
BCD1YHR040W NIF3P53081 288 aa2.99□□□□□ -1.93
BCD1YHR040W CGR1P53188 120 aa2.99□□□□□ -1.93
BCD1YHR040W FMP48P53233 369 aa2.99□□□□□ -1.93
BCD1YHR040W OKP1P53298 406 aa2.99□□□□□ -1.93
BCD1YHR040W MPA43P53583 542 aaPredicted RBP2.99□□□□□ -1.93
BCD1YHR040W YNR048WP53740 393 aa2.99□□□□□ -1.93
BCD1YHR040W YDR248CQ03786 193 aa2.99□□□□□ -1.93
BCD1YHR040W SEI1Q06058 285 aa2.99□□□□□ -1.93
BCD1YHR040W NMA1Q06178 401 aaKnown RBP2.99□□□□□ -1.93
BCD1YHR040W CTS2Q06350 511 aa2.99□□□□□ -1.93
BCD1YHR040W GEP3Q08622 556 aa2.99□□□□□ -1.93
BCD1YHR040W YOR376WQ08900 122 aa2.99□□□□□ -1.93
BCD1YHR040W TMS1Q12116 473 aa2.99□□□□□ -1.93
BCD1YHR040W RNH203Q12338 110 aa2.99□□□□□ -1.93
BCD1YHR040W YRM1Q12340 786 aa2.99□□□□□ -1.93
BCD1YHR040W AIM45Q12480 344 aaKnown RBP2.99□□□□□ -1.93
BCD1YHR040W MES1P00958 751 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W YFR010W-AP0C5N0 62 aa2.98□□□□□ -1.93
BCD1YHR040W UBI4P0CG63 381 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W RPL12AP0CX53 165 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W RPL12BP0CX54 165 aa2.98□□□□□ -1.93
BCD1YHR040W RPI1P23250 407 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W VMA5P31412 392 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W HSP150P32478 413 aa2.98□□□□□ -1.93
BCD1YHR040W FMT1P32785 401 aa2.98□□□□□ -1.93
BCD1YHR040W ECM31P38122 312 aa2.98□□□□□ -1.93
BCD1YHR040W YER079WP40052 210 aaKnown RBP2.98□□□□□ -1.93
BCD1YHR040W YIL060WP40519 144 aa2.98□□□□□ -1.93
BCD1YHR040W SNO3P43544 222 aa2.98□□□□□ -1.93
BCD1YHR040W YFR054CP43622 192 aa2.98□□□□□ -1.93
BCD1YHR040W PGU1P47180 361 aa2.98□□□□□ -1.93
BCD1YHR040W UBP8P50102 471 aa2.98□□□□□ -1.93
BCD1YHR040W PKP2P53170 491 aa2.98□□□□□ -1.93
BCD1YHR040W RNH201P53942 307 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 112.6 ms