RNA–Protein interactions for RNA: YGR085C

RPL11B, Transcript of Ribosomal 60S subunit protein L11B, yeastyeast

Gene RPL11B, Length 525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL11BYGR085C USB1Q12208 290 aaKnown RBP1.74□□□□□ -2.13
RPL11BYGR085C REP2P03872 296 aa1.73□□□□□ -2.13
RPL11BYGR085C GCN3P14741 305 aa1.73□□□□□ -2.13
RPL11BYGR085C MER1P16523 270 aa1.73□□□□□ -2.13
RPL11BYGR085C TCA17P32613 152 aa1.73□□□□□ -2.13
RPL11BYGR085C TAF14P35189 244 aa1.73□□□□□ -2.13
RPL11BYGR085C KDX1P36005 433 aa1.73□□□□□ -2.13
RPL11BYGR085C SIP3P38717 1229 aa1.73□□□□□ -2.13
RPL11BYGR085C IKI1P38874 309 aa1.73□□□□□ -2.13
RPL11BYGR085C PGD1P40356 397 aa1.73□□□□□ -2.13
RPL11BYGR085C RPL33BP41056 107 aaKnown RBP1.73□□□□□ -2.13
RPL11BYGR085C PRM10P42946 383 aa1.73□□□□□ -2.13
RPL11BYGR085C ERG25P53045 309 aa1.73□□□□□ -2.13
RPL11BYGR085C PDR17P53844 350 aa1.73□□□□□ -2.13
RPL11BYGR085C YMR226CQ05016 267 aaKnown RBP1.73□□□□□ -2.13
RPL11BYGR085C ATG38Q05789 226 aaKnown RBP1.73□□□□□ -2.13
RPL11BYGR085C YRA1Q12159 226 aaKnown RBP1.73□□□□□ -2.13
RPL11BYGR085C ADF1Q2V2Q1 113 aa1.73□□□□□ -2.13
RPL11BYGR085C TDA8Q6B2U8 126 aa1.73□□□□□ -2.13
RPL11BYGR085C TUS1Q06412 1307 aa1.72□□□□□ -2.13
RPL11BYGR085C HTB1P02293 131 aaKnown RBP1.72□□□□□ -2.13
RPL11BYGR085C HTB2P02294 131 aa1.72□□□□□ -2.13
RPL11BYGR085C YLR156WP0CE96 114 aa1.72□□□□□ -2.13
RPL11BYGR085C YLR159WP0CE97 114 aa1.72□□□□□ -2.13
RPL11BYGR085C YLR161WP0CE98 114 aa1.72□□□□□ -2.13
RPL11BYGR085C KSS1P14681 368 aa1.72□□□□□ -2.13
RPL11BYGR085C SPS18P32572 300 aa1.72□□□□□ -2.13
RPL11BYGR085C SKG1P36169 355 aa1.72□□□□□ -2.13
RPL11BYGR085C AST2P39945 430 aaKnown RBP1.72□□□□□ -2.13
RPL11BYGR085C RMD6P39975 231 aa1.72□□□□□ -2.13
RPL11BYGR085C FCY21P40039 528 aa1.72□□□□□ -2.13
RPL11BYGR085C RFC4P40339 323 aaKnown RBP1.72□□□□□ -2.13
RPL11BYGR085C YKE4P40544 346 aa1.72□□□□□ -2.13
RPL11BYGR085C HOP2P53187 214 aa1.72□□□□□ -2.13
RPL11BYGR085C EFM5P53200 248 aaKnown RBP1.72□□□□□ -2.13
RPL11BYGR085C CUS2P53830 285 aaPredicted RBP1.72□□□□□ -2.13
RPL11BYGR085C GAS3Q03655 524 aa1.72□□□□□ -2.13
RPL11BYGR085C BOL1Q3E793 110 aa1.72□□□□□ -2.13
RPL11BYGR085C SKI3P17883 1432 aaKnown RBP1.72□□□□□ -2.13
RPL11BYGR085C RAS2P01120 322 aaKnown RBP1.71□□□□□ -2.14
RPL11BYGR085C SEC4P07560 215 aaKnown RBP1.71□□□□□ -2.14
RPL11BYGR085C RFA3P26755 122 aaKnown RBP1.71□□□□□ -2.14
RPL11BYGR085C MEI4P29467 408 aa1.71□□□□□ -2.14
RPL11BYGR085C MRPL28P36527 147 aa1.71□□□□□ -2.14
RPL11BYGR085C YCR087C-AP37263 153 aa1.71□□□□□ -2.14
RPL11BYGR085C TRM5P38793 499 aa1.71□□□□□ -2.14
RPL11BYGR085C VTC1P40046 129 aaRIP-Chip data1.71□□□□□ -2.14not detected
RPL11BYGR085C BMT5P40493 336 aa1.71□□□□□ -2.14
RPL11BYGR085C CYT2Q00873 224 aa1.71□□□□□ -2.14
RPL11BYGR085C TSC3Q3E790 80 aa1.71□□□□□ -2.14
RPL11BYGR085C RPL25P04456 142 aaKnown RBP1.7□□□□□ -2.14
RPL11BYGR085C PET9P18239 318 aaKnown RBP1.7□□□□□ -2.14
RPL11BYGR085C MRPS28P21771 286 aa1.7□□□□□ -2.14
RPL11BYGR085C PTM1P32857 523 aa1.7□□□□□ -2.14
RPL11BYGR085C YHR022CP38763 256 aa1.7□□□□□ -2.14
RPL11BYGR085C YER034WP40022 185 aaKnown RBP1.7□□□□□ -2.14
RPL11BYGR085C PEP8P40335 379 aa1.7□□□□□ -2.14
RPL11BYGR085C ICE2P40499 491 aa1.7□□□□□ -2.14
RPL11BYGR085C GIM3P53900 129 aa1.7□□□□□ -2.14
RPL11BYGR085C SWP1Q02795 286 aa1.7□□□□□ -2.14
RPL11BYGR085C SPG3Q04398 127 aaPredicted RBP1.7□□□□□ -2.14
RPL11BYGR085C YPL162CQ12042 273 aa1.7□□□□□ -2.14
RPL11BYGR085C GET4Q12125 312 aa1.7□□□□□ -2.14
RPL11BYGR085C CDC7P06243 507 aa1.69□□□□□ -2.14
RPL11BYGR085C MATALPHA2P0CY08 210 aa1.69□□□□□ -2.14
RPL11BYGR085C HMLALPHA2P0CY09 210 aa1.69□□□□□ -2.14
RPL11BYGR085C CBF1P17106 351 aa1.69□□□□□ -2.14
RPL11BYGR085C AYR1P40471 297 aa1.69□□□□□ -2.14
RPL11BYGR085C LSM7P53905 115 aaKnown RBP1.69□□□□□ -2.14
RPL11BYGR085C MDM32Q12171 622 aa1.69□□□□□ -2.14
RPL11BYGR085C YHR214C-EQ8TGK0 99 aa1.69□□□□□ -2.14
RPL11BYGR085C DDI2P0CH63 225 aa1.68□□□□□ -2.14
RPL11BYGR085C DDI3P0CH64 225 aa1.68□□□□□ -2.14
RPL11BYGR085C MAG1P22134 296 aaKnown RBP1.68□□□□□ -2.14
RPL11BYGR085C SEC17P32602 292 aa1.68□□□□□ -2.14
RPL11BYGR085C UTP30P36144 274 aaKnown RBP1.68□□□□□ -2.14
RPL11BYGR085C DSE2P38844 325 aa1.68□□□□□ -2.14
RPL11BYGR085C SVP26P38869 228 aa1.68□□□□□ -2.14
RPL11BYGR085C TIR3P40552 269 aa1.68□□□□□ -2.14
RPL11BYGR085C GET1P53192 235 aa1.68□□□□□ -2.14
RPL11BYGR085C YGR050CP53231 118 aa1.68□□□□□ -2.14
RPL11BYGR085C YNR062CP53748 327 aa1.68□□□□□ -2.14
RPL11BYGR085C MRPS17Q03246 237 aaPredicted RBP1.68□□□□□ -2.14
RPL11BYGR085C RRP17Q04031 235 aaPredicted RBP1.68□□□□□ -2.14
RPL11BYGR085C SMD2Q06217 110 aaKnown RBP1.68□□□□□ -2.14
RPL11BYGR085C MCP1Q12106 302 aa1.68□□□□□ -2.14
RPL11BYGR085C YIL177CP40434 1758 aa1.67□□□□□ -2.14
RPL11BYGR085C YJL225CP40889 1758 aa1.67□□□□□ -2.14
RPL11BYGR085C SEN2P16658 377 aa1.67□□□□□ -2.14
RPL11BYGR085C ACP1P32463 125 aa1.67□□□□□ -2.14
RPL11BYGR085C SNC2P33328 115 aa1.67□□□□□ -2.14
RPL11BYGR085C MRPL17P36528 281 aa1.67□□□□□ -2.14
RPL11BYGR085C MTW1P39731 289 aa1.67□□□□□ -2.14
RPL11BYGR085C HMF1P40037 129 aaKnown RBP1.67□□□□□ -2.14
RPL11BYGR085C AGE2P40529 298 aa1.67□□□□□ -2.14
RPL11BYGR085C BOL2P53082 120 aa1.67□□□□□ -2.14
RPL11BYGR085C RTC4P53850 401 aa1.67□□□□□ -2.14
RPL11BYGR085C ABP140Q08641 628 aaKnown RBP1.67□□□□□ -2.14
RPL11BYGR085C RIO1Q12196 484 aaKnown RBP1.67□□□□□ -2.14
RPL11BYGR085C TIM9O74700 87 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms