RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	YLR161W	P0CE98	114 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	MDH2	P22133	377 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	DBF2	P22204	572 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	PRP18	P33411	251 aa	Predicted RBP	0.76	□□□□□ -2.29
SCW11	YGL028C	APS1	P35181	156 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	POP4	P38336	279 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	AVT2	P39981	480 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	TIR3	P40552	269 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	RPL33B	P41056	107 aa	Known RBP	0.76	□□□□□ -2.29
SCW11	YGL028C	BXI1	P48558	297 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	RAD17	P48581	401 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	CWC23	P52868	283 aa	Predicted RBP	0.76	□□□□□ -2.29
SCW11	YGL028C	YMD8	Q03697	442 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	RUD3	Q12234	484 aa	Known RBP	0.76	□□□□□ -2.29
SCW11	YGL028C	YIL177C	P40434	1758 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	YJL225C	P40889	1758 aa		0.76	□□□□□ -2.29
SCW11	YGL028C	CDC33	P07260	213 aa	Known RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	NHP6B	P11633	99 aa	Known RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	ATG22	P25568	528 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	TAF14	P35189	244 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	CBT1	P36038	271 aa	Predicted RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	MRPL17	P36528	281 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	YRB2	P40517	327 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	AGE2	P40529	298 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	IRC18	P47056	224 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	ADO1	P47143	340 aa	Known RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	BUD25	P85052	153 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	SWP1	Q02795	286 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	SML1	Q04964	104 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	MCP1	Q12106	302 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	JLP1	Q12358	412 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	RPL28	P02406	149 aa	Known RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	STE18	P18852	110 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	COQ1	P18900	473 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	UTP30	P36144	274 aa	Known RBP	0.75	□□□□□ -2.29
SCW11	YGL028C	MRPL28	P36527	147 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	UMP1	P38293	148 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	TCD1	P38756	429 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	VTC1	P40046	129 aa	RIP-Chip data	0.75	□□□□□ -2.29	not detected
SCW11	YGL028C	YNL194C	P40169	301 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	YGR050C	P53231	118 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	PDR17	P53844	350 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	PGA2	P53903	129 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	PET191	Q02772	108 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	YDR249C	Q03787	373 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	YLR162W	Q06235	118 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	TSC3	Q3E790	80 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	TDA8	Q6B2U8	126 aa		0.75	□□□□□ -2.29
SCW11	YGL028C	PDR18	P53756	1333 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	JIP3	O13555	125 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	YGL010W	P25338	174 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected
SCW11	YGL028C	YBR219C	P38317	127 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	YBR220C	P38318	560 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	IKI1	P38874	309 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	GLE2	P40066	365 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	YNL217W	P40152	326 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	YNR077C	P53758	84 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	SNZ1	Q03148	297 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	GAS3	Q03655	524 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	YNG1	Q08465	219 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	FSF1	Q12029	327 aa	Known RBP	0.74	□□□□□ -2.29
SCW11	YGL028C	GIS3	Q12418	502 aa		0.74	□□□□□ -2.29
SCW11	YGL028C	TUS1	Q06412	1307 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	TIM9	O74700	87 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	GCN3	P14741	305 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	RPB4	P20433	221 aa	Predicted RBP	0.73	□□□□□ -2.29
SCW11	YGL028C	FZF1	P32805	299 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	UPS2	P35200	230 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	YET1	P35723	206 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	GAA1	P39012	614 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	GVP36	P40531	326 aa	Known RBP	0.73	□□□□□ -2.29
SCW11	YGL028C	COG5	P53951	403 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	GGA1	Q06336	557 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	CSI2	Q08054	341 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	GPM2	Q12008	311 aa		0.73	□□□□□ -2.29
SCW11	YGL028C	YOL162W	P0CF19	215 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	RPL2A	P0CX45	254 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	RPL2B	P0CX46	254 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	URA5	P13298	226 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	KSS1	P14681	368 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	RPB3	P16370	318 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	ATP15	P21306	62 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	MRPS28	P21771	286 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	MAG1	P22134	296 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	RFA3	P26755	122 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	MGM101	P32787	269 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	SNC2	P33328	115 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	TMA19	P35691	167 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
SCW11	YGL028C	YCR087C-A	P37263	153 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	POP3	P53833	195 aa	Predicted RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	LSM7	P53905	115 aa	Known RBP	0.72	□□□□□ -2.29
SCW11	YGL028C	YPL162C	Q12042	273 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	YCL012C	Q8J0M4	134 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	YHR214C-E	Q8TGK0	99 aa		0.72	□□□□□ -2.29
SCW11	YGL028C	ACC1	Q00955	2233 aa	Known RBP	0.71	□□□□□ -2.29
SCW11	YGL028C	MER1	P16523	270 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	BET1	P22804	142 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	NTG1	P31378	399 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms