RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeastyeast

Gene HTA1, Length 399 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTA1YDR225W UBC12P52491 188 aa2.42□□□□□ -2.02
HTA1YDR225W YNL010WP53981 241 aaKnown RBP2.42□□□□□ -2.02
HTA1YDR225W GAS3Q03655 524 aa2.42□□□□□ -2.02
HTA1YDR225W YDL085C-AQ3E7B7 68 aaKnown RBP2.42□□□□□ -2.02
HTA1YDR225W HIS3P06633 220 aa2.41□□□□□ -2.02
HTA1YDR225W SIR2P06700 562 aa2.41□□□□□ -2.02
HTA1YDR225W YPR170W-BP0C5R9 85 aa2.41□□□□□ -2.02
HTA1YDR225W MAG1P22134 296 aaKnown RBP2.41□□□□□ -2.02
HTA1YDR225W YGP1P38616 354 aaKnown RBP2.41□□□□□ -2.02
HTA1YDR225W YAR068WP39564 161 aa2.41□□□□□ -2.02
HTA1YDR225W HMF1P40037 129 aaKnown RBP2.41□□□□□ -2.02
HTA1YDR225W YER076CP40049 302 aa2.41□□□□□ -2.02
HTA1YDR225W TMA22P47089 198 aaPredicted RBP2.41□□□□□ -2.02
HTA1YDR225W FLC3P53121 802 aa2.41□□□□□ -2.02
HTA1YDR225W YOR283WQ12040 230 aaKnown RBP2.41□□□□□ -2.02
HTA1YDR225W YLR050CQ12155 161 aaKnown RBP2.41□□□□□ -2.02
HTA1YDR225W ADH3P07246 375 aaKnown RBP2.4□□□□□ -2.03
HTA1YDR225W CNB1P25296 175 aa2.4□□□□□ -2.03
HTA1YDR225W ATG22P25568 528 aa2.4□□□□□ -2.03
HTA1YDR225W YCR090CP25654 182 aaKnown RBP2.4□□□□□ -2.03
HTA1YDR225W SEC17P32602 292 aa2.4□□□□□ -2.03
HTA1YDR225W UTP30P36144 274 aaKnown RBP2.4□□□□□ -2.03
HTA1YDR225W FIG1P38224 298 aa2.4□□□□□ -2.03
HTA1YDR225W POP4P38336 279 aa2.4□□□□□ -2.03
HTA1YDR225W RSM25P40496 264 aa2.4□□□□□ -2.03
HTA1YDR225W GON7P46984 123 aa2.4□□□□□ -2.03
HTA1YDR225W ATG39Q06159 398 aa2.4□□□□□ -2.03
HTA1YDR225W BRX1Q08235 291 aaKnown RBP2.4□□□□□ -2.03
HTA1YDR225W YPR063CQ12160 140 aa2.4□□□□□ -2.03
HTA1YDR225W MBF1O14467 151 aaKnown RBP2.39□□□□□ -2.03
HTA1YDR225W SNF4P12904 322 aa2.39□□□□□ -2.03
HTA1YDR225W ARO7P32178 256 aa2.39□□□□□ -2.03
HTA1YDR225W YOX1P34161 385 aa2.39□□□□□ -2.03
HTA1YDR225W MID2P36027 376 aa2.39□□□□□ -2.03
HTA1YDR225W YHR125WP38831 101 aa2.39□□□□□ -2.03
HTA1YDR225W AST2P39945 430 aaKnown RBP2.39□□□□□ -2.03
HTA1YDR225W LSM4P40070 187 aaKnown RBP2.39□□□□□ -2.03
HTA1YDR225W ECM11Q04110 302 aa2.39□□□□□ -2.03
HTA1YDR225W YOR268CQ08734 132 aa2.39□□□□□ -2.03
HTA1YDR225W YPL162CQ12042 273 aa2.39□□□□□ -2.03
HTA1YDR225W RIO1Q12196 484 aaKnown RBP2.39□□□□□ -2.03
HTA1YDR225W YFR032C-BQ8TGU2 87 aa2.39□□□□□ -2.03
HTA1YDR225W SOD1P00445 154 aaKnown RBP2.38□□□□□ -2.03
HTA1YDR225W Q0255P03881 472 aa2.38□□□□□ -2.03
HTA1YDR225W YLR156WP0CE96 114 aa2.38□□□□□ -2.03
HTA1YDR225W YLR159WP0CE97 114 aa2.38□□□□□ -2.03
HTA1YDR225W YLR161WP0CE98 114 aa2.38□□□□□ -2.03
HTA1YDR225W DPM1P14020 267 aaKnown RBP2.38□□□□□ -2.03
HTA1YDR225W AHC2P25649 128 aa2.38□□□□□ -2.03
HTA1YDR225W MEI4P29467 408 aa2.38□□□□□ -2.03
HTA1YDR225W DER1P38307 211 aa2.38□□□□□ -2.03
HTA1YDR225W NVJ1P38881 321 aa2.38□□□□□ -2.03
HTA1YDR225W GLE2P40066 365 aa2.38□□□□□ -2.03
HTA1YDR225W ARC15P40518 154 aaRIP-Chip data2.38□□□□□ -2.03not detected
HTA1YDR225W FMP32P43557 207 aa2.38□□□□□ -2.03
HTA1YDR225W YGL235WP53071 178 aa2.38□□□□□ -2.03
HTA1YDR225W NUP49Q02199 472 aa2.38□□□□□ -2.03
HTA1YDR225W YLR053CQ12026 108 aa2.38□□□□□ -2.03
HTA1YDR225W NSL1Q12143 216 aa2.38□□□□□ -2.03
HTA1YDR225W REP2P03872 296 aa2.37□□□□□ -2.03
HTA1YDR225W RPL9AP05738 191 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W RPS24AP0CX31 135 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W RPS24BP0CX32 135 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W SKG1P36169 355 aa2.37□□□□□ -2.03
HTA1YDR225W EDC3P39998 551 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W YIR035CP40579 254 aa2.37□□□□□ -2.03
HTA1YDR225W ARP3P47117 449 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W RPL9BP51401 191 aaKnown RBP2.37□□□□□ -2.03
HTA1YDR225W AIM34Q03673 198 aa2.37□□□□□ -2.03
HTA1YDR225W YDR249CQ03787 373 aa2.37□□□□□ -2.03
HTA1YDR225W PEX12Q04370 399 aa2.37□□□□□ -2.03
HTA1YDR225W MCP1Q12106 302 aa2.37□□□□□ -2.03
HTA1YDR225W PEX11Q12462 236 aa2.37□□□□□ -2.03
HTA1YDR225W PSF1Q12488 208 aa2.37□□□□□ -2.03
HTA1YDR225W RPS28BP0C0X0 67 aaKnown RBP2.36□□□□□ -2.03
HTA1YDR225W RPB3P16370 318 aaKnown RBP2.36□□□□□ -2.03
HTA1YDR225W PET9P18239 318 aaKnown RBP2.36□□□□□ -2.03
HTA1YDR225W ACP1P32463 125 aa2.36□□□□□ -2.03
HTA1YDR225W YER188WP40103 239 aa2.36□□□□□ -2.03
HTA1YDR225W ICE2P40499 491 aa2.36□□□□□ -2.03
HTA1YDR225W YIL059CP40520 121 aa2.36□□□□□ -2.03
HTA1YDR225W BUD13P46947 266 aaPredicted RBP2.36□□□□□ -2.03
HTA1YDR225W ARO8P53090 500 aaKnown RBP2.36□□□□□ -2.03
HTA1YDR225W APJ1P53940 528 aa2.36□□□□□ -2.03
HTA1YDR225W TRM12Q04235 462 aa2.36□□□□□ -2.03
HTA1YDR225W SUE1Q06524 206 aa2.36□□□□□ -2.03
HTA1YDR225W RDI1Q12434 202 aa2.36□□□□□ -2.03
HTA1YDR225W RPS28AQ3E7X9 67 aaPredicted RBP2.36□□□□□ -2.03
HTA1YDR225W SAS5Q99314 248 aa2.36□□□□□ -2.03
HTA1YDR225W CDC8P00572 216 aa2.35□□□□□ -2.03
HTA1YDR225W CMD1P06787 147 aaKnown RBP2.35□□□□□ -2.03
HTA1YDR225W RPS23AP0CX29 145 aaKnown RBP2.35□□□□□ -2.03
HTA1YDR225W RPS23BP0CX30 145 aa2.35□□□□□ -2.03
HTA1YDR225W BET1P22804 142 aa2.35□□□□□ -2.03
HTA1YDR225W SEC14P24280 304 aaKnown RBP2.35□□□□□ -2.03
HTA1YDR225W CTR2P38865 189 aa2.35□□□□□ -2.03
HTA1YDR225W SMD3P43321 101 aaKnown RBP2.35□□□□□ -2.03
HTA1YDR225W YFH7P43591 353 aa2.35□□□□□ -2.03
HTA1YDR225W PIR5P46999 287 aa2.35□□□□□ -2.03
HTA1YDR225W YGR026WP53217 278 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms