RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeastyeast

Gene HTB1, Length 396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTB1YDR224C TDA8Q6B2U8 126 aa1.55□□□□□ -2.16
HTB1YDR224C THP2O13539 261 aaKnown RBP1.54□□□□□ -2.16
HTB1YDR224C RHO1P06780 209 aaKnown RBP1.54□□□□□ -2.16
HTB1YDR224C YMR31P19955 123 aa1.54□□□□□ -2.16
HTB1YDR224C PPA2P28239 310 aa1.54□□□□□ -2.16
HTB1YDR224C MIC12P38341 106 aa1.54□□□□□ -2.16
HTB1YDR224C BXI1P48558 297 aa1.54□□□□□ -2.16
HTB1YDR224C DOC1P53068 250 aa1.54□□□□□ -2.16
HTB1YDR224C ALG13P53178 202 aa1.54□□□□□ -2.16
HTB1YDR224C YDR248CQ03786 193 aa1.54□□□□□ -2.16
HTB1YDR224C GPA2P10823 449 aa1.53□□□□□ -2.16
HTB1YDR224C UPS2P35200 230 aa1.53□□□□□ -2.16
HTB1YDR224C UMP1P38293 148 aa1.53□□□□□ -2.16
HTB1YDR224C GAA1P39012 614 aa1.53□□□□□ -2.16
HTB1YDR224C FAR7P43592 221 aa1.53□□□□□ -2.16
HTB1YDR224C MET5P47169 1442 aa1.53□□□□□ -2.16
HTB1YDR224C SWP1Q02795 286 aa1.53□□□□□ -2.16
HTB1YDR224C GAS3Q03655 524 aa1.53□□□□□ -2.16
HTB1YDR224C RPL28P02406 149 aaKnown RBP1.52□□□□□ -2.17
HTB1YDR224C QCR8P08525 94 aa1.52□□□□□ -2.17
HTB1YDR224C DBF2P22204 572 aa1.52□□□□□ -2.17
HTB1YDR224C TMA19P35691 167 aaKnown RBP1.52□□□□□ -2.17
HTB1YDR224C MRPL17P36528 281 aa1.52□□□□□ -2.17
HTB1YDR224C YNR077CP53758 84 aa1.52□□□□□ -2.17
HTB1YDR224C UBR2Q07963 1872 aa1.52□□□□□ -2.17
HTB1YDR224C TIM9O74700 87 aa1.51□□□□□ -2.17
HTB1YDR224C SNC2P33328 115 aa1.51□□□□□ -2.17
HTB1YDR224C NUP57P48837 541 aa1.51□□□□□ -2.17
HTB1YDR224C TSC3Q3E790 80 aa1.51□□□□□ -2.17
HTB1YDR224C TUS1Q06412 1307 aa1.5□□□□□ -2.17
HTB1YDR224C APS1P35181 156 aa1.5□□□□□ -2.17
HTB1YDR224C EAF6P47128 113 aa1.5□□□□□ -2.17
HTB1YDR224C ANT1Q06497 328 aa1.5□□□□□ -2.17
HTB1YDR224C RIO1Q12196 484 aaKnown RBP1.5□□□□□ -2.17
HTB1YDR224C GVP36P40531 326 aaKnown RBP1.49□□□□□ -2.17
HTB1YDR224C YPL162CQ12042 273 aa1.49□□□□□ -2.17
HTB1YDR224C PDR18P53756 1333 aa1.48□□□□□ -2.17
HTB1YDR224C YBR121C-AP0C5L4 52 aa1.48□□□□□ -2.17
HTB1YDR224C TFC1P32367 649 aa1.48□□□□□ -2.17
HTB1YDR224C BMH2P34730 273 aaKnown RBP1.48□□□□□ -2.17
HTB1YDR224C YBR209WP38311 105 aa1.48□□□□□ -2.17
HTB1YDR224C RMD6P39975 231 aa1.48□□□□□ -2.17
HTB1YDR224C RTR1P40084 226 aaPredicted RBP1.48□□□□□ -2.17
HTB1YDR224C FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
HTB1YDR224C MCP1Q12106 302 aa1.48□□□□□ -2.17
HTB1YDR224C SEY1Q99287 776 aa1.48□□□□□ -2.17
HTB1YDR224C CYR1P08678 2026 aaKnown RBP1.48□□□□□ -2.17
HTB1YDR224C NHP6BP11633 99 aaKnown RBP1.47□□□□□ -2.17
HTB1YDR224C SEC17P32602 292 aa1.47□□□□□ -2.17
HTB1YDR224C TCA17P32613 152 aa1.47□□□□□ -2.17
HTB1YDR224C UTP30P36144 274 aaKnown RBP1.47□□□□□ -2.17
HTB1YDR224C TCD1P38756 429 aa1.47□□□□□ -2.17
HTB1YDR224C AST2P39945 430 aaKnown RBP1.47□□□□□ -2.17
HTB1YDR224C ERJ5P43613 295 aaPredicted RBP1.47□□□□□ -2.17
HTB1YDR224C GPM2Q12008 311 aa1.47□□□□□ -2.17
HTB1YDR224C GCN3P14741 305 aa1.46□□□□□ -2.18
HTB1YDR224C RTC3P38804 111 aaPredicted RBP1.46□□□□□ -2.18
HTB1YDR224C JLP1Q12358 412 aa1.46□□□□□ -2.18
HTB1YDR224C YKL183C-AQ3E765 70 aa1.46□□□□□ -2.18
HTB1YDR224C URA5P13298 226 aaKnown RBP1.45□□□□□ -2.18
HTB1YDR224C KSS1P14681 368 aa1.45□□□□□ -2.18
HTB1YDR224C PBN1P25580 416 aa1.45□□□□□ -2.18
HTB1YDR224C PTM1P32857 523 aa1.45□□□□□ -2.18
HTB1YDR224C ERG28P40030 148 aa1.45□□□□□ -2.18
HTB1YDR224C YRB1P41920 201 aaKnown RBP1.45□□□□□ -2.18
HTB1YDR224C OTU1P43558 301 aa1.45□□□□□ -2.18
HTB1YDR224C ADO1P47143 340 aaKnown RBP1.45□□□□□ -2.18
HTB1YDR224C POP3P53833 195 aaPredicted RBP1.45□□□□□ -2.18
HTB1YDR224C YDL180WQ12301 547 aa1.45□□□□□ -2.18
HTB1YDR224C BET1P22804 142 aa1.44□□□□□ -2.18
HTB1YDR224C IDH1P28834 360 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
HTB1YDR224C CBT1P36038 271 aaPredicted RBP1.44□□□□□ -2.18
HTB1YDR224C IRC18P47056 224 aa1.44□□□□□ -2.18
HTB1YDR224C KNH1P50112 268 aa1.44□□□□□ -2.18
HTB1YDR224C MGA1P53050 456 aa1.44□□□□□ -2.18
HTB1YDR224C PDR17P53844 350 aa1.44□□□□□ -2.18
HTB1YDR224C ATG40Q99325 256 aa1.44□□□□□ -2.18
HTB1YDR224C CPA1P07258 411 aaKnown RBP1.43□□□□□ -2.18
HTB1YDR224C STE18P18852 110 aa1.43□□□□□ -2.18
HTB1YDR224C MGM101P32787 269 aaKnown RBP1.43□□□□□ -2.18
HTB1YDR224C TVP38P36164 337 aa1.43□□□□□ -2.18
HTB1YDR224C YBR285WP38354 144 aa1.43□□□□□ -2.18
HTB1YDR224C YNL194CP40169 301 aa1.43□□□□□ -2.18
HTB1YDR224C RAD17P48581 401 aa1.43□□□□□ -2.18
HTB1YDR224C YDR274CP87283 123 aa1.43□□□□□ -2.18
HTB1YDR224C YHR214C-EQ8TGK0 99 aa1.43□□□□□ -2.18
HTB1YDR224C NCB2Q92317 146 aa1.43□□□□□ -2.18
HTB1YDR224C COQ1P18900 473 aa1.42□□□□□ -2.18
HTB1YDR224C SHE2P36068 246 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
HTB1YDR224C SIP3P38717 1229 aa1.42□□□□□ -2.18
HTB1YDR224C YGR050CP53231 118 aa1.42□□□□□ -2.18
HTB1YDR224C MPA43P53583 542 aaPredicted RBP1.42□□□□□ -2.18
HTB1YDR224C CUS2P53830 285 aaPredicted RBP1.42□□□□□ -2.18
HTB1YDR224C YDR249CQ03787 373 aa1.42□□□□□ -2.18
HTB1YDR224C YFR032C-BQ8TGU2 87 aa1.42□□□□□ -2.18
HTB1YDR224C YLR236CA0A023PZG4 107 aa1.41□□□□□ -2.18
HTB1YDR224C YER076CP40049 302 aa1.41□□□□□ -2.18
HTB1YDR224C RPL25P04456 142 aaKnown RBP1.4□□□□□ -2.19
HTB1YDR224C SEC4P07560 215 aaKnown RBP1.4□□□□□ -2.19
HTB1YDR224C RPB3P16370 318 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms