RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W YDL086WQ07505 273 aa8.09□□□□□ -1.11
SED1YDR077W FCF2Q12035 217 aaPredicted RBP8.09□□□□□ -1.11
SED1YDR077W RPP1AP05318 106 aaPredicted RBP8.08□□□□□ -1.12
SED1YDR077W PRS3P38689 320 aaKnown RBP8.08□□□□□ -1.12
SED1YDR077W ASP1P38986 381 aaPredicted RBP8.08□□□□□ -1.12
SED1YDR077W SSO2P39926 295 aa8.08□□□□□ -1.12
SED1YDR077W SRB7P47822 140 aa8.08□□□□□ -1.12
SED1YDR077W YGL117WP53133 265 aa8.08□□□□□ -1.12
SED1YDR077W GPI15P53961 229 aa8.08□□□□□ -1.12
SED1YDR077W TIM44Q01852 431 aa8.08□□□□□ -1.12
SED1YDR077W FIT1Q04433 528 aa8.08□□□□□ -1.12
SED1YDR077W PRP11Q07350 266 aaPredicted RBP8.08□□□□□ -1.12
SED1YDR077W ERG2P32352 222 aa8.07□□□□□ -1.12
SED1YDR077W YOX1P34161 385 aa8.07□□□□□ -1.12
SED1YDR077W RMD6P39975 231 aa8.07□□□□□ -1.12
SED1YDR077W TOK1P40310 691 aa8.07□□□□□ -1.12
SED1YDR077W YHC3P47040 408 aa8.07□□□□□ -1.12
SED1YDR077W MRPL22P53881 309 aa8.07□□□□□ -1.12
SED1YDR077W ERP1Q05359 219 aaKnown RBP8.07□□□□□ -1.12
SED1YDR077W GAT3Q07928 141 aa8.07□□□□□ -1.12
SED1YDR077W ALG6Q12001 544 aaKnown RBP8.07□□□□□ -1.12
SED1YDR077W YOR192C-CQ3E736 78 aa8.07□□□□□ -1.12
SED1YDR077W HUG1Q6Q5K6 68 aa8.07□□□□□ -1.12
SED1YDR077W YBR056W-AI2HB52 66 aa8.06□□□□□ -1.12
SED1YDR077W OSH7P38755 437 aa8.06□□□□□ -1.12
SED1YDR077W GLR1P41921 483 aaKnown RBP8.06□□□□□ -1.12
SED1YDR077W GON7P46984 123 aa8.06□□□□□ -1.12
SED1YDR077W SKO1Q02100 647 aa8.06□□□□□ -1.12
SED1YDR077W RIM9Q04734 239 aa8.06□□□□□ -1.12
SED1YDR077W YOR292CQ08743 309 aa8.06□□□□□ -1.12
SED1YDR077W SWT1Q12104 458 aa8.06□□□□□ -1.12
SED1YDR077W YLR108CQ12259 485 aa8.06□□□□□ -1.12
SED1YDR077W ATP14Q12349 124 aa8.06□□□□□ -1.12
SED1YDR077W DGK1Q12382 290 aa8.06□□□□□ -1.12
SED1YDR077W UBI4P0CG63 381 aaKnown RBP8.05□□□□□ -1.12
SED1YDR077W EMP24P32803 203 aaKnown RBP8.05□□□□□ -1.12
SED1YDR077W YKL107WP34251 309 aa8.05□□□□□ -1.12
SED1YDR077W YGP1P38616 354 aaKnown RBP8.05□□□□□ -1.12
SED1YDR077W YEA6P39953 335 aa8.05□□□□□ -1.12
SED1YDR077W PCL7P40186 285 aa8.05□□□□□ -1.12
SED1YDR077W SLM1P40485 686 aa8.05□□□□□ -1.12
SED1YDR077W HSK3P69852 69 aa8.05□□□□□ -1.12
SED1YDR077W SED1Q01589 338 aa8.05□□□□□ -1.12
SED1YDR077W CAC2Q04199 468 aa8.05□□□□□ -1.12
SED1YDR077W YDR114CQ04597 100 aa8.05□□□□□ -1.12
SED1YDR077W BER1Q06688 274 aaKnown RBP8.05□□□□□ -1.12
SED1YDR077W YFH1Q07540 174 aa8.05□□□□□ -1.12
SED1YDR077W YOL118CQ08259 102 aa8.05□□□□□ -1.12
SED1YDR077W COQ2P32378 372 aa8.04□□□□□ -1.12
SED1YDR077W RPD3P32561 433 aa8.04□□□□□ -1.12
SED1YDR077W SRY1P36007 326 aa8.04□□□□□ -1.12
SED1YDR077W SHM2P37291 469 aaKnown RBP8.04□□□□□ -1.12
SED1YDR077W AGX1P43567 385 aa8.04□□□□□ -1.12
SED1YDR077W BNA2P47125 453 aa8.04□□□□□ -1.12
SED1YDR077W BUL1P48524 976 aa8.04□□□□□ -1.12
SED1YDR077W MSO1P53604 210 aaKnown RBP8.04□□□□□ -1.12
SED1YDR077W ISU1Q03020 165 aa8.04□□□□□ -1.12
SED1YDR077W YJR012CP47087 207 aa8.03□□□□□ -1.12
SED1YDR077W XPT1P47165 209 aa8.03□□□□□ -1.12
SED1YDR077W PHO23P50947 330 aa8.03□□□□□ -1.12
SED1YDR077W YIF1P53845 314 aaKnown RBP8.03□□□□□ -1.12
SED1YDR077W GMC1Q04399 608 aa8.03□□□□□ -1.12
SED1YDR077W ASM4Q05166 528 aa8.03□□□□□ -1.12
SED1YDR077W PAM18Q07914 168 aa8.03□□□□□ -1.12
SED1YDR077W RFM1Q12192 310 aa8.03□□□□□ -1.12
SED1YDR077W AIM45Q12480 344 aaKnown RBP8.03□□□□□ -1.12
SED1YDR077W RPL39P04650 51 aa8.02□□□□□ -1.13
SED1YDR077W LSB5P25369 354 aa8.02□□□□□ -1.13
SED1YDR077W SPC29P33419 253 aa8.02□□□□□ -1.13
SED1YDR077W YER121WP40076 114 aa8.02□□□□□ -1.13
SED1YDR077W YNL046WP53956 172 aa8.02□□□□□ -1.13
SED1YDR077W EST3Q03096 181 aa8.02□□□□□ -1.13
SED1YDR077W YDR415CQ04033 374 aaPredicted RBP8.02□□□□□ -1.13
SED1YDR077W YMR090WQ04304 227 aaKnown RBP8.02□□□□□ -1.13
SED1YDR077W ECM18Q04623 453 aa8.02□□□□□ -1.13
SED1YDR077W PRP8P33334 2413 aaKnown RBP8.02□□□□□ -1.13
SED1YDR077W DAL80P26343 269 aa8.01□□□□□ -1.13
SED1YDR077W ECM31P38122 312 aa8.01□□□□□ -1.13
SED1YDR077W IKI1P38874 309 aa8.01□□□□□ -1.13
SED1YDR077W RFC2P40348 353 aa8.01□□□□□ -1.13
SED1YDR077W INN1P53901 409 aa8.01□□□□□ -1.13
SED1YDR077W HED1Q03937 162 aa8.01□□□□□ -1.13
SED1YDR077W YTH1Q06102 208 aaPredicted RBP8.01□□□□□ -1.13
SED1YDR077W HRD1Q08109 551 aa8.01□□□□□ -1.13
SED1YDR077W ZRC1P20107 442 aa8□□□□□ -1.13
SED1YDR077W ECM25P32525 599 aa8□□□□□ -1.13
SED1YDR077W SLM6P38343 150 aa8□□□□□ -1.13
SED1YDR077W ECM14P38836 430 aa8□□□□□ -1.13
SED1YDR077W CWC25P53854 179 aaKnown RBP8□□□□□ -1.13
SED1YDR077W RPL21AQ02753 160 aaKnown RBP8□□□□□ -1.13
SED1YDR077W MRPS17Q03246 237 aaPredicted RBP8□□□□□ -1.13
SED1YDR077W RPL21BQ12672 160 aaKnown RBP8□□□□□ -1.13
SED1YDR077W GDH1P07262 454 aaKnown RBP7.99□□□□□ -1.13
SED1YDR077W SPS100P13130 326 aa7.99□□□□□ -1.13
SED1YDR077W ERV1P27882 189 aa7.99□□□□□ -1.13
SED1YDR077W GAR1P28007 205 aaKnown RBP7.99□□□□□ -1.13
SED1YDR077W CPR5P35176 225 aa7.99□□□□□ -1.13
SED1YDR077W YKL162CP36052 402 aa7.99□□□□□ -1.13
SED1YDR077W SHG1P38337 142 aa7.99□□□□□ -1.13
SED1YDR077W YEA4P40004 342 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms