RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W YMR315WQ04869 349 aaKnown RBP2.17□□□□□ -2.06
SPB1YCL054W CTR3Q06686 241 aa2.17□□□□□ -2.06
SPB1YCL054W SLD7Q08457 257 aa2.17□□□□□ -2.06
SPB1YCL054W MMT2Q08970 484 aa2.17□□□□□ -2.06
SPB1YCL054W YLR053CQ12026 108 aa2.17□□□□□ -2.06
SPB1YCL054W STE7P06784 515 aa2.16□□□□□ -2.06
SPB1YCL054W BCY1P07278 416 aaKnown RBP2.16□□□□□ -2.06
SPB1YCL054W CUP1-1P0CX80 61 aa2.16□□□□□ -2.06
SPB1YCL054W CUP1-2P0CX81 61 aa2.16□□□□□ -2.06
SPB1YCL054W YCR099CP25657 155 aa2.16□□□□□ -2.06
SPB1YCL054W LDS1P31379 325 aa2.16□□□□□ -2.06
SPB1YCL054W CAT2P32796 670 aaKnown RBP2.16□□□□□ -2.06
SPB1YCL054W JEN1P36035 616 aa2.16□□□□□ -2.06
SPB1YCL054W YNL208WP40159 199 aaKnown RBP2.16□□□□□ -2.06
SPB1YCL054W NUP57P48837 541 aa2.16□□□□□ -2.06
SPB1YCL054W TRM9P49957 279 aa2.16□□□□□ -2.06
SPB1YCL054W NSA1P53136 463 aaPredicted RBP2.16□□□□□ -2.06
SPB1YCL054W YDR209CQ03480 137 aa2.16□□□□□ -2.06
SPB1YCL054W YDR248CQ03786 193 aa2.16□□□□□ -2.06
SPB1YCL054W YET2Q04210 160 aa2.16□□□□□ -2.06
SPB1YCL054W YET3Q07451 203 aa2.16□□□□□ -2.06
SPB1YCL054W COQ10Q08058 207 aa2.16□□□□□ -2.06
SPB1YCL054W VPS68Q12016 184 aa2.16□□□□□ -2.06
SPB1YCL054W NSL1Q12143 216 aa2.16□□□□□ -2.06
SPB1YCL054W YAL064W-BO13512 126 aa2.16□□□□□ -2.06
SPB1YCL054W HSP26P15992 214 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SPB1YCL054W PPH21P23594 369 aa2.16□□□□□ -2.06
SPB1YCL054W SPS18P32572 300 aa2.16□□□□□ -2.06
SPB1YCL054W YBL059WP34224 193 aa2.16□□□□□ -2.06
SPB1YCL054W FMP46P36141 133 aaKnown RBP2.16□□□□□ -2.06
SPB1YCL054W FRM2P37261 193 aa2.16□□□□□ -2.06
SPB1YCL054W DER1P38307 211 aa2.16□□□□□ -2.06
SPB1YCL054W SHG1P38337 142 aa2.16□□□□□ -2.06
SPB1YCL054W MIG3P39943 394 aa2.16□□□□□ -2.06
SPB1YCL054W OXA1P39952 402 aa2.16□□□□□ -2.06
SPB1YCL054W PRE6P40303 254 aaKnown RBP2.16□□□□□ -2.06
SPB1YCL054W YJR012CP47087 207 aa2.16□□□□□ -2.06
SPB1YCL054W YLR152CP54072 576 aa2.16□□□□□ -2.06
SPB1YCL054W RRP42Q12277 265 aaPredicted RBP2.16□□□□□ -2.06
SPB1YCL054W YOL163WP0CF20 169 aa2.15□□□□□ -2.07
SPB1YCL054W DPM1P14020 267 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W SEC14P24280 304 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W IFM1P25038 676 aa2.15□□□□□ -2.07
SPB1YCL054W MDH3P32419 343 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
SPB1YCL054W EFM1P38732 585 aa2.15□□□□□ -2.07
SPB1YCL054W SEO1P39709 593 aa2.15□□□□□ -2.07
SPB1YCL054W YIA6P40556 373 aa2.15□□□□□ -2.07
SPB1YCL054W MMS2P53152 137 aa2.15□□□□□ -2.07
SPB1YCL054W RCF2P53721 224 aa2.15□□□□□ -2.07
SPB1YCL054W DTD1Q07648 150 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W UTP20P35194 2493 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W CDC8P00572 216 aa2.15□□□□□ -2.07
SPB1YCL054W HHF1P02309 103 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W VPH2P32341 215 aa2.15□□□□□ -2.07
SPB1YCL054W SWD3P38123 315 aa2.15□□□□□ -2.07
SPB1YCL054W CUE1P38428 203 aa2.15□□□□□ -2.07
SPB1YCL054W GRE3P38715 327 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
SPB1YCL054W YHI9P38765 294 aa2.15□□□□□ -2.07
SPB1YCL054W GIM4P40005 111 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W RRG9P40156 214 aa2.15□□□□□ -2.07
SPB1YCL054W MOG1P47123 218 aa2.15□□□□□ -2.07
SPB1YCL054W YGL235WP53071 178 aa2.15□□□□□ -2.07
SPB1YCL054W YGR042WP53227 271 aa2.15□□□□□ -2.07
SPB1YCL054W NRM1P53718 249 aa2.15□□□□□ -2.07
SPB1YCL054W ASI3P53983 676 aa2.15□□□□□ -2.07
SPB1YCL054W YML018CQ03730 393 aa2.15□□□□□ -2.07
SPB1YCL054W UTP15Q04305 513 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W YPL245WQ12179 454 aaKnown RBP2.15□□□□□ -2.07
SPB1YCL054W AGC1Q12482 902 aa2.15□□□□□ -2.07
SPB1YCL054W YAL063C-AQ3E791 96 aa2.15□□□□□ -2.07
SPB1YCL054W RPL28P02406 149 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W GPA2P10823 449 aa2.14□□□□□ -2.07
SPB1YCL054W SCL1P21243 252 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W ARO7P32178 256 aa2.14□□□□□ -2.07
SPB1YCL054W TIP20P33891 701 aa2.14□□□□□ -2.07
SPB1YCL054W SOK1P40317 901 aa2.14□□□□□ -2.07
SPB1YCL054W YJR111CP47148 283 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W MCM22P47167 239 aa2.14□□□□□ -2.07
SPB1YCL054W BRR6P53062 197 aa2.14□□□□□ -2.07
SPB1YCL054W RPL22BP56628 122 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W NOC4Q06512 552 aaPredicted RBP2.14□□□□□ -2.07
SPB1YCL054W IRC25Q07951 179 aa2.14□□□□□ -2.07
SPB1YCL054W RFM1Q12192 310 aa2.14□□□□□ -2.07
SPB1YCL054W TPO4Q12256 659 aa2.14□□□□□ -2.07
SPB1YCL054W ARO2P28777 376 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W YEL073CP39974 107 aa2.14□□□□□ -2.07
SPB1YCL054W AVT7P40501 490 aa2.14□□□□□ -2.07
SPB1YCL054W FMP32P43557 207 aa2.14□□□□□ -2.07
SPB1YCL054W MIC19P43594 170 aa2.14□□□□□ -2.07
SPB1YCL054W PDR17P53844 350 aa2.14□□□□□ -2.07
SPB1YCL054W ACT1P60010 375 aaKnown RBP2.14□□□□□ -2.07
SPB1YCL054W YMR279CQ03263 540 aa2.14□□□□□ -2.07
SPB1YCL054W CSN9Q03981 162 aa2.14□□□□□ -2.07
SPB1YCL054W TRM12Q04235 462 aa2.14□□□□□ -2.07
SPB1YCL054W SEI1Q06058 285 aa2.14□□□□□ -2.07
SPB1YCL054W GTT2Q12390 233 aa2.14□□□□□ -2.07
SPB1YCL054W COS2P0CX12 379 aa2.13□□□□□ -2.07
SPB1YCL054W COS3P0CX13 379 aa2.13□□□□□ -2.07
SPB1YCL054W MRPL28P36527 147 aa2.13□□□□□ -2.07
SPB1YCL054W TRM7P38238 310 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms