RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 CCDC149Q6ZUS6 474 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 STXBP4Q6ZWJ1 553 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 ZDHHC14Q8IZN3 488 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 PLCD3Q8N3E9 789 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 APPL2Q8NEU8 664 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 BEST2Q8NFU1 509 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 SMG7Q92540 1137 aaKnown RBP20.65■□□□□ 0.9
TRADD-203ENST00000563348 EDAQ92838 391 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 HPS3Q969F9 1004 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 CHAMP1Q96JM3 812 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 SPATA32Q96LK8 384 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 WDR6Q9NNW5 1121 aaKnown RBP20.65■□□□□ 0.9
TRADD-203ENST00000563348 ATP6V1DQ9Y5K8 247 aa20.65■□□□□ 0.9
TRADD-203ENST00000563348 PLXNA3P51805 1871 aa20.64■□□□□ 0.9
TRADD-203ENST00000563348 TRIOO75962 3097 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 H7C4K7 107 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 CMA1P23946 247 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 AARSP49588 968 aaKnown RBP eCLIP20.64■□□□□ 0.89
TRADD-203ENST00000563348 UVSSAQ2YD98 709 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 LIN9Q5TKA1 542 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 OTOP3Q7RTS5 596 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 TDRD5Q8NAT2 981 aaKnown RBP20.64■□□□□ 0.89
TRADD-203ENST00000563348 GLIS3Q8NEA6 775 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.89
TRADD-203ENST00000563348 PIDD1Q9HB75 910 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 PCDHB8Q9UN66 801 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 C2CD2Q9Y426 696 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 MYO10Q9HD67 2058 aa20.64■□□□□ 0.89
TRADD-203ENST00000563348 MTCL1Q9Y4B5 1905 aaKnown RBP20.64■□□□□ 0.89
TRADD-203ENST00000563348 M0QZQ0 153 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 LDHAP00338 332 aaKnown RBP20.63■□□□□ 0.89
TRADD-203ENST00000563348 C8AP07357 584 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 NFICP08651 508 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 HNRNPA1P09651 372 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRADD-203ENST00000563348 ZXDAP98168 799 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 TMEM132DQ14C87 1099 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 UNC13DQ70J99 1090 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 RTL10Q7L3V2 364 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 ZNF461Q8TAF7 563 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 ZNF507Q8TCN5 953 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 BLZF1Q9H2G9 400 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 TECTAO75443 2155 aa20.63■□□□□ 0.89
TRADD-203ENST00000563348 PRR33A8MZF0 331 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 PIRO00625 290 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 ABLIM3O94929 683 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 IL18RAPO95256 599 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 SLFN14P0C7P3 912 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 PAX3P23760 479 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 HOXA9P31269 272 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 AFMP43652 599 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 EHHADHQ08426 723 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 PTPN21Q16825 1174 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 FAM26FQ5R3K3 315 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 PPM1LQ5SGD2 360 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 C9orf57Q5W0N0 161 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 EPM2AIP1Q7L775 607 aaPredicted RBP20.62■□□□□ 0.89
TRADD-203ENST00000563348 CEP57L1Q8IYX8 460 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 ZSWIM2Q8NEG5 633 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 CBWD1Q9BRT8 395 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 FAM213AQ9BRX8 229 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 LIMD1Q9UGP4 676 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 SERTAD1Q9UHV2 236 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 FBXL5Q9UKA1 691 aa20.62■□□□□ 0.89
TRADD-203ENST00000563348 CLUHO75153 1309 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 PDCD11Q14690 1871 aaKnown RBP20.61■□□□□ 0.89
TRADD-203ENST00000563348 A0A1B0GVL5 298 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 PVALEFA0A1B0GWK0 134 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 ANO9A1A5B4 782 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 PPEF2O14830 753 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 EIF3DO15371 548 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRADD-203ENST00000563348 EXTL3O43909 919 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 OAZ2O95190 189 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 CASP1P29466 404 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 HOXD13P35453 343 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 LILRA4P59901 499 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 ROR1Q01973 937 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 CUL4BQ13620 913 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 CTXN3Q4LDR2 81 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 NT5DC4Q86YG4 428 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 BRSK2Q8IWQ3 736 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 SAAL1Q96ER3 474 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 SCAND2PQ9GZW5 306 aaPredicted RBP20.61■□□□□ 0.89
TRADD-203ENST00000563348 HPSEQ9Y251 543 aa20.61■□□□□ 0.89
TRADD-203ENST00000563348 KIAA0391O15091 583 aaKnown RBP20.6■□□□□ 0.89
TRADD-203ENST00000563348 ACTN4O43707 911 aaKnown RBP20.6■□□□□ 0.89
TRADD-203ENST00000563348 POU2F2P09086 479 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 PFKFB1P16118 471 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 COL9A1P20849 921 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 ZNF280DQ6N043 979 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 DSTYKQ6XUX3 929 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 TRIM67Q6ZTA4 783 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 EFCAB13Q8IY85 973 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 SLC7A14Q8TBB6 771 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 PAGE5Q96GU1 130 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 PCIF1Q9H4Z3 704 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 DPP3Q9NY33 737 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 USP25Q9UHP3 1055 aa20.6■□□□□ 0.89
TRADD-203ENST00000563348 TIMM13Q9Y5L4 95 aaPredicted RBP20.6■□□□□ 0.89
TRADD-203ENST00000563348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms