RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CDY1Q9Y6F8 540 aa20.62■□□□□ 0.89
DDX54-208ENST00000551344 SLFN14P0C7P3 912 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 TMEM132DQ14C87 1099 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 SLC8B1Q6J4K2 584 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 CCDC149Q6ZUS6 474 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 UNC13DQ70J99 1090 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 OTOP3Q7RTS5 596 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 NT5DC4Q86YG4 428 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 CEP57L1Q8IYX8 460 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 ZDHHC14Q8IZN3 488 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 FEZF2Q8TBJ5 459 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 SMG7Q92540 1137 aaKnown RBP20.61■□□□□ 0.89
DDX54-208ENST00000551344 ZNF707Q96C28 371 aaPredicted RBP20.61■□□□□ 0.89
DDX54-208ENST00000551344 FGFBP2Q9BYJ0 223 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 WDR6Q9NNW5 1121 aaKnown RBP20.61■□□□□ 0.89
DDX54-208ENST00000551344 USP25Q9UHP3 1055 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 VWA8A3KMH1 1905 aa20.61■□□□□ 0.89
DDX54-208ENST00000551344 MTCL1Q9Y4B5 1905 aaKnown RBP20.61■□□□□ 0.89
DDX54-208ENST00000551344 PVALEFA0A1B0GWK0 134 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 C2CD4DB7Z1M9 353 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 M0QZQ0 153 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 KIAA0391O15091 583 aaKnown RBP20.6■□□□□ 0.89
DDX54-208ENST00000551344 EIF3DO15371 548 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDX54-208ENST00000551344 TBC1D4O60343 1298 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 IL18RAPO95256 599 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 HNRNPA1P09651 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDX54-208ENST00000551344 SP100P23497 879 aaPredicted RBP20.6■□□□□ 0.89
DDX54-208ENST00000551344 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDX54-208ENST00000551344 LIN9Q5TKA1 542 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 RSPO2Q6UXX9 243 aaPredicted RBP20.6■□□□□ 0.89
DDX54-208ENST00000551344 TDRD5Q8NAT2 981 aaKnown RBP20.6■□□□□ 0.89
DDX54-208ENST00000551344 ZNF461Q8TAF7 563 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 ZNF507Q8TCN5 953 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 EDAQ92838 391 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 ACSF2Q96CM8 615 aaPredicted RBP20.6■□□□□ 0.89
DDX54-208ENST00000551344 LRFN3Q9BTN0 628 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 PIDD1Q9HB75 910 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 C11orf16Q9NQ32 467 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 PCDHB8Q9UN66 801 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 PLXNA3P51805 1871 aa20.6■□□□□ 0.89
DDX54-208ENST00000551344 NFICP08651 508 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 HOXA9P31269 272 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 AFMP43652 599 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 EHHADHQ08426 723 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 FAM26FQ5R3K3 315 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 HPS3Q969F9 1004 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 FAM213AQ9BRX8 229 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 OXCT2Q9BYC2 517 aaPredicted RBP20.59■□□□□ 0.89
DDX54-208ENST00000551344 SERTAD1Q9UHV2 236 aa20.59■□□□□ 0.89
DDX54-208ENST00000551344 PDCD11Q14690 1871 aaKnown RBP20.58■□□□□ 0.89
DDX54-208ENST00000551344 A0A1B0GVL5 298 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 ANO9A1A5B4 782 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 PRR33A8MZF0 331 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 PIRO00625 290 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 EXTL3O43909 919 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 ABLIM3O94929 683 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 C8AP07357 584 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 GUCY2FP51841 1108 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 LILRA4P59901 499 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 CTXN3Q4LDR2 81 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 PPM1LQ5SGD2 360 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 C9orf57Q5W0N0 161 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 EPM2AIP1Q7L775 607 aaPredicted RBP20.58■□□□□ 0.89
DDX54-208ENST00000551344 CHAMP1Q96JM3 812 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 BLZF1Q9H2G9 400 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 HPSEQ9Y251 543 aa20.58■□□□□ 0.89
DDX54-208ENST00000551344 FAM237AA0A1B0GTK4 181 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 ACTN4O43707 911 aaKnown RBP20.57■□□□□ 0.88
DDX54-208ENST00000551344 OAZ2O95190 189 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 POU2F2P09086 479 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 PFKFB1P16118 471 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 SNRPFP62306 86 aaKnown RBP20.57■□□□□ 0.88
DDX54-208ENST00000551344 NUCB2P80303 420 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 ZXDAP98168 799 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 ROR1Q01973 937 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 CUL4BQ13620 913 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 PTPN21Q16825 1174 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 ZNF280DQ6N043 979 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 ARMCX5Q6P1M9 558 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 DSTYKQ6XUX3 929 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 BRSK2Q8IWQ3 736 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 TMEM130Q8N3G9 435 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 GLIS3Q8NEA6 775 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 SAAL1Q96ER3 474 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 PAGE5Q96GU1 130 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 CBWD1Q9BRT8 395 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 DPP3Q9NY33 737 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 LIMD1Q9UGP4 676 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 FBXL5Q9UKA1 691 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 MAFFQ9ULX9 164 aa20.57■□□□□ 0.88
DDX54-208ENST00000551344 CLUHO75153 1309 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 ARHGEF37A1IGU5 675 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 XYLBO75191 536 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 MYL1P05976 194 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 ATF2P15336 505 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 TYMPP19971 482 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 CASP1P29466 404 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 ELF1P32519 619 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 HOXD13P35453 343 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 YWHAHQ04917 246 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms