RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 TDP2O95551 362 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 IGHDP01880 384 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 NEFLP07196 543 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 ARL2P36404 184 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 ARPP19P56211 112 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 GRSF1Q12849 480 aaKnown RBP eCLIP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 CAPSQ13938 189 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 UPP1Q16831 310 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 PKN3Q6P5Z2 889 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 PPP4R3CPQ6ZMV5 832 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 ARID3BQ8IVW6 561 aaPredicted RBP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 TTC8Q8TAM2 541 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 RSPRY1Q96DX4 576 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 FAM20AQ96MK3 541 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 LSG1Q9H089 658 aaKnown RBP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 ZSWIM4Q9H7M6 989 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 SH3GLB2Q9NR46 395 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 PRMT7Q9NVM4 692 aaPredicted RBP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 GTSE1Q9NYZ3 720 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 CEP72Q9P209 647 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
ABCF3-205ENST00000466416 EBF1Q9UH73 591 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 TPCN1Q9ULQ1 816 aa10.17□□□□□ -0.78
ABCF3-205ENST00000466416 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
ABCF3-205ENST00000466416 VWA8A3KMH1 1905 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 SYN3O14994 580 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 N4BP3O15049 544 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 DGAT1O75907 488 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 RECQL4O94761 1208 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 GJA1P17302 382 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 CLCNKBP51801 687 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 TWF1Q12792 350 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 LMAN2Q12907 356 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 MRPL58Q14197 206 aaKnown RBP10.16□□□□□ -0.78
ABCF3-205ENST00000466416 EPHA7Q15375 998 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 COL28A1Q2UY09 1125 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 UAP1L1Q3KQV9 507 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 ITPRIPL2Q3MIP1 535 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 TMEM196Q5HYL7 178 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 CD300LGQ6UXG3 332 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 GLIS3Q8NEA6 775 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 SHKBP1Q8TBC3 707 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 ASAP3Q8TDY4 903 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 LXNQ9BS40 222 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 AFF4Q9UHB7 1163 aaKnown RBP10.16□□□□□ -0.78
ABCF3-205ENST00000466416 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
ABCF3-205ENST00000466416 VAV3Q9UKW4 847 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 IGSF10Q6WRI0 2623 aa10.16□□□□□ -0.78
ABCF3-205ENST00000466416 ASXL3Q9C0F0 2248 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 MAST4O15021 2626 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 UPK3BL1B0FP48 263 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 UPK3BL2E5RIL1 263 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 TRDMT1O14717 391 aaKnown RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 DCLK1O15075 740 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 TBX3O15119 743 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 SEC24BO95487 1268 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 APBB3O95704 486 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 GLRA2P23416 452 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 IGFBP6P24592 240 aaPredicted RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 WEE1P30291 646 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 BRCC3P46736 316 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 NLRP5P59047 1200 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 IRX4P78413 519 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 SIM1P81133 766 aaPredicted RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 AMPD2Q01433 879 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 FAM187BQ17R55 369 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 LRRC3BQ96PB8 259 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 PPP1R10Q96QC0 940 aaKnown RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 ADPGKQ9BRR6 497 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 FZD8Q9H461 694 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 THG1LQ9NWX6 298 aaKnown RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 EVLQ9UI08 416 aaPredicted RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 FBXL5Q9UKA1 691 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 NAP1L2Q9ULW6 460 aaPredicted RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 ITPR1Q14643 2758 aa10.15□□□□□ -0.78
ABCF3-205ENST00000466416 ASCC3Q8N3C0 2202 aaKnown RBP10.15□□□□□ -0.78
ABCF3-205ENST00000466416 LAMA1P25391 3075 aa10.15□□□□□ -0.79
ABCF3-205ENST00000466416 CACNA1EQ15878 2313 aa10.15□□□□□ -0.79
ABCF3-205ENST00000466416 A0A1W2PRU2 124 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 I3L4J1 428 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 ZBTB39O15060 712 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
ABCF3-205ENST00000466416 FGF19O95750 216 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 PRKCBP05771 671 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 GBP1P32455 592 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 SCAPQ12770 1279 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 PLD1Q13393 1074 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 ZNF423Q2M1K9 1284 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 FBXO43Q4G163 708 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 CTXN3Q4LDR2 81 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 USP39Q53GS9 565 aaKnown RBP10.14□□□□□ -0.79
ABCF3-205ENST00000466416 PMS2CLQ68D20 193 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 PPP4R3AQ6IN85 833 aa10.14□□□□□ -0.79
ABCF3-205ENST00000466416 FSTL4Q6MZW2 842 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms