RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ANTXR2P58335 489 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 GABPAQ06546 454 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 PTPN21Q16825 1174 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 IMMTQ16891 758 aaKnown RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ABCB5Q2M3G0 1257 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SBK1Q52WX2 424 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 C1QTNF12Q5T7M4 302 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 WDR78Q5VTH9 848 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 FSTL4Q6MZW2 842 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 FAM83AQ86UY5 434 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 OXR1Q8N573 874 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 C1orf162Q8NEQ5 155 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SNRNP27Q8WVK2 155 aaKnown RBP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 NACAP1Q9BZK3 213 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ZDHHC5Q9C0B5 715 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SMOC1Q9H4F8 434 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ZMAT4Q9H898 229 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SP110Q9HB58 689 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 KCNH7Q9NS40 1196 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 C14orf119Q9NWQ9 140 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SLAMF8Q9P0V8 285 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 IMPACTQ9P2X3 320 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 GABBR1Q9UBS5 961 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ZNF180Q9UJW8 692 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SYNPO2Q9UMS6 1093 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3A3-202ENST00000460925 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
SF3A3-202ENST00000460925 SMCHD1A6NHR9 2005 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 FITM1A5D6W6 292 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 MPHOSPH10O00566 681 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 HGSO14964 777 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 RANBP6O60518 1105 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 KRT37O76014 449 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 LARGE1O95461 756 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 MSL3P1P0C860 447 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 GLI4P10075 376 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 MYBL2P10244 700 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 ZSCAN20P17040 1043 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 GNALP38405 381 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 CD96P40200 585 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 RECQLP46063 649 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 FNTBP49356 437 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 TNFAIP1Q13829 316 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 SLC14A2Q15849 920 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 AKNAD1Q5T1N1 836 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 FKBP1CQ5VVH2 108 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 STEAP3Q658P3 488 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 CXorf57Q6NSI4 855 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 FRMD7Q6ZUT3 714 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 KCTD1Q719H9 257 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 SPRED2Q7Z698 418 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 PNMA8AQ86V59 439 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 LDHDQ86WU2 507 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 CCAR1Q8IX12 1150 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 MB21D2Q8IYB1 491 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 TTC8Q8TAM2 541 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 LMBR1Q8WVP7 490 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 ZKSCAN4Q969J2 545 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 ITFG2Q969R8 447 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 FAXDC2Q96IV6 333 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 CLMNQ96JQ2 1002 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 WRNIP1Q96S55 665 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 PCIF1Q9H4Z3 704 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 LUC7LQ9NQ29 371 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 JADE2Q9NQC1 790 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 TOPORSQ9NS56 1045 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 USP36Q9P275 1121 aaKnown RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 SERPINB13Q9UIV8 391 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 ANAPC4Q9UJX5 808 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 PNMA8BQ9ULN7 279 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 PCNTO95613 3336 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 COL11A1P12107 1806 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-202ENST00000460925 PARP14Q460N5 1801 aa5.66□□□□□ -1.5
SF3A3-202ENST00000460925 UBE2Q2LH0YL09 131 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 MSTNO14793 375 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 COBLO75128 1261 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 SNUPNO95149 360 aaKnown RBP5.65□□□□□ -1.5
SF3A3-202ENST00000460925 CELF2O95319 508 aaKnown RBP5.65□□□□□ -1.5
SF3A3-202ENST00000460925 GH2P01242 217 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 NTRK1P04629 796 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 RXRAP19793 462 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 CD40P25942 277 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 GUCY1A2P33402 732 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 SSR1P43307 286 aaKnown RBP5.65□□□□□ -1.5
SF3A3-202ENST00000460925 HTRA3P83110 453 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 DMTNQ08495 405 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 SEPT2Q15019 361 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 EPHA7Q15375 998 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 SEC23AQ15436 765 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 ESRP1Q6NXG1 681 aaKnown RBP5.65□□□□□ -1.5
SF3A3-202ENST00000460925 SLC23A3Q6PIS1 610 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 MFSD6Q6ZSS7 791 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 EP400NLQ6ZTU2 488 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 RALYLQ86SE5 291 aaKnown RBP5.65□□□□□ -1.5
SF3A3-202ENST00000460925 VSIG10LQ86VR7 867 aa5.65□□□□□ -1.5
SF3A3-202ENST00000460925 DTX1Q86Y01 620 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms