RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PAPOLAP51003 745 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 KPNA2P52292 529 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 RNF14Q9UBS8 474 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 HMGCRP04035 888 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 SLCO1A2P46721 670 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 FMR1Q06787 632 aaKnown RBP eCLIP18.05■□□□□ 0.484e-7■■■□□ 18.5
SMARCA4-203ENST00000429416 NR1H3Q13133 447 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 FAM110CQ1W6H9 321 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 FRA10AC1Q70Z53 315 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 OLA1Q9NTK5 396 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 DHX9Q08211 1270 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 CDH18Q13634 790 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 STMN2Q93045 179 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 DDX56Q9NY93 547 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 FHOD1Q9Y613 1164 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 SIGLEC1Q9BZZ2 1709 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 E5RI56 91 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 RTN2O75298 545 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 MT-ND3P03897 115 aa18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 ZNF467Q7Z7K2 595 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-203ENST00000429416 APOL1O14791 398 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 MUTP22033 750 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 PSMC6P62333 389 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 ROR1Q01973 937 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 DLK2Q6UY11 383 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 ANKRD23Q86SG2 305 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 SLC7A5P2Q9GIP4 190 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 USP20Q9Y2K6 914 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 UBA6A0AVT1 1052 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 PPP1R12AO14974 1030 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 RPL10AP62906 217 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 IRX4P78413 519 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 SH3KBP1Q96B97 665 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 MKNK1Q9BUB5 465 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 TRPM5Q9NZQ8 1165 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 AFF4Q9UHB7 1163 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 TOMM70O94826 608 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 ASPHQ12797 758 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 EXOC1LA0A1B0GW35 172 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 H0Y626 953 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 ZFXP17010 805 aaPredicted RBP18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 WEE1P30291 646 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 GIT2Q14161 759 aa18.04■□□□□ 0.48
SMARCA4-203ENST00000429416 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 BRD3Q15059 726 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 ANO4Q32M45 955 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 RSAD1Q9HA92 442 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 ATP1A2P50993 1020 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 YWHAHQ04917 246 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 TWF1Q12792 350 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 KLC3Q6P597 504 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 VSIG10LQ86VR7 867 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 CDKL3Q8IVW4 592 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 SYNPO2Q9UMS6 1093 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 PACSIN2Q9UNF0 486 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 NUMBP49757 651 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 SLC27A1Q6PCB7 646 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 ATPAF2Q8N5M1 289 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 ARHGEF2Q92974 986 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 AGAP3Q96P47 875 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 POP1Q99575 1024 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 NDFIP2Q9NV92 336 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 CYTH3O43739 400 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 RARRES1P49788 294 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 EFHC1Q5JVL4 640 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 ARHGAP18Q8N392 663 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 PBXIP1Q96AQ6 731 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 DDX27Q96GQ7 796 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 PGLYRP2Q96PD5 576 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 DNAJC6O75061 913 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 CCDC157Q569K6 752 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 JADE1Q6IE81 842 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 SAYSD1Q9NPB0 183 aa18.03■□□□□ 0.48
SMARCA4-203ENST00000429416 EEF2KO00418 725 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 EGFRP00533 1210 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 DRP2Q13474 957 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 EMILIN2Q9BXX0 1053 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 BFARQ9NZS9 450 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 MRC1P22897 1456 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 A0A1W2PQC6 194 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 CASP2P42575 452 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 NTRK3Q16288 839 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 OTOP1Q7RTM1 612 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 DHX40Q8IX18 779 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 RIN2Q8WYP3 895 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 DSEQ9UL01 958 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 PCDHB8Q9UN66 801 aa18.02■□□□□ 0.48
SMARCA4-203ENST00000429416 SNX24Q9Y343 169 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms