RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W GPM2Q12008 311 aa4.51□□□□□ -1.69
DPB2YPR175W YPS3Q12303 508 aa4.51□□□□□ -1.69
DPB2YPR175W IQG1Q12280 1495 aa4.5□□□□□ -1.69
DPB2YPR175W ECM13P38195 257 aa4.5□□□□□ -1.69
DPB2YPR175W YBL008W-AQ3E821 79 aa4.5□□□□□ -1.69
DPB2YPR175W DNF3Q12674 1656 aa4.5□□□□□ -1.69
DPB2YPR175W CBP6P07253 162 aaPredicted RBP4.5□□□□□ -1.69
DPB2YPR175W KSS1P14681 368 aa4.5□□□□□ -1.69
DPB2YPR175W GRE3P38715 327 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
DPB2YPR175W YMR144WP40214 342 aaKnown RBP4.5□□□□□ -1.69
DPB2YPR175W PRE5P40302 234 aaKnown RBP4.5□□□□□ -1.69
DPB2YPR175W YJL028WP47062 111 aa4.5□□□□□ -1.69
DPB2YPR175W YDL211CQ12121 372 aa4.5□□□□□ -1.69
DPB2YPR175W GDB1Q06625 1536 aa4.5□□□□□ -1.69
DPB2YPR175W MRPL39P36533 70 aa4.49□□□□□ -1.69
DPB2YPR175W COG3P40094 801 aa4.49□□□□□ -1.69
DPB2YPR175W YIP3P53633 176 aa4.49□□□□□ -1.69
DPB2YPR175W USB1Q12208 290 aaKnown RBP4.49□□□□□ -1.69
DPB2YPR175W CHC1P22137 1653 aaKnown RBP4.49□□□□□ -1.69
DPB2YPR175W MLP2P40457 1679 aa4.49□□□□□ -1.69
DPB2YPR175W BDH1P39714 382 aa4.49□□□□□ -1.69
DPB2YPR175W SDT1P53078 280 aa4.49□□□□□ -1.69
DPB2YPR175W CAX4P53223 239 aa4.49□□□□□ -1.69
DPB2YPR175W YOL019WQ08157 551 aa4.49□□□□□ -1.69
DPB2YPR175W PDR15Q04182 1529 aaKnown RBP4.48□□□□□ -1.69
DPB2YPR175W HSP26P15992 214 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
DPB2YPR175W SEC72P39742 193 aaKnown RBP4.48□□□□□ -1.69
DPB2YPR175W YPL247CQ12523 523 aa4.48□□□□□ -1.69
DPB2YPR175W BUD3P25558 1636 aa4.47□□□□□ -1.69
DPB2YPR175W TOM40P23644 387 aaKnown RBP4.47□□□□□ -1.69
DPB2YPR175W ECM34P38728 170 aa4.47□□□□□ -1.69
DPB2YPR175W YIL054WP40524 105 aa4.47□□□□□ -1.69
DPB2YPR175W SMD1Q02260 146 aaPredicted RBP4.47□□□□□ -1.69
DPB2YPR175W YDR124WQ04608 324 aa4.47□□□□□ -1.69
DPB2YPR175W YLR179CQ06252 201 aaKnown RBP4.47□□□□□ -1.69
DPB2YPR175W CMC2Q3E7A4 109 aa4.47□□□□□ -1.69
DPB2YPR175W UTH1P36135 365 aa4.47□□□□□ -1.69
DPB2YPR175W EMP46Q12396 444 aa4.47□□□□□ -1.69
DPB2YPR175W YHI9P38765 294 aa4.46□□□□□ -1.7
DPB2YPR175W MDM34P53083 459 aa4.46□□□□□ -1.7
DPB2YPR175W HAL1Q01766 294 aa4.46□□□□□ -1.7
DPB2YPR175W GOT1Q03554 138 aa4.46□□□□□ -1.7
DPB2YPR175W YML096WQ04489 525 aa4.46□□□□□ -1.7
DPB2YPR175W YNG1Q08465 219 aa4.46□□□□□ -1.7
DPB2YPR175W POG1P40473 351 aa4.45□□□□□ -1.7
DPB2YPR175W MRPL49P40858 161 aaPredicted RBP4.45□□□□□ -1.7
DPB2YPR175W BXI1P48558 297 aa4.45□□□□□ -1.7
DPB2YPR175W ERV29P53337 310 aa4.45□□□□□ -1.7
DPB2YPR175W YMR279CQ03263 540 aa4.45□□□□□ -1.7
DPB2YPR175W NNT1Q05874 261 aa4.45□□□□□ -1.7
DPB2YPR175W YPL264CQ08980 353 aa4.45□□□□□ -1.7
DPB2YPR175W YPL150WQ12152 901 aa4.45□□□□□ -1.7
DPB2YPR175W ARO1P08566 1588 aaKnown RBP4.45□□□□□ -1.7
DPB2YPR175W NUP157P40064 1391 aaKnown RBP4.45□□□□□ -1.7
DPB2YPR175W AUS1Q08409 1394 aa4.45□□□□□ -1.7
DPB2YPR175W SEC4P07560 215 aaKnown RBP4.45□□□□□ -1.7
DPB2YPR175W MRPL28P36527 147 aa4.45□□□□□ -1.7
DPB2YPR175W MMS2P53152 137 aa4.45□□□□□ -1.7
DPB2YPR175W TVP15Q03860 143 aa4.45□□□□□ -1.7
DPB2YPR175W NOT5Q12514 560 aaPredicted RBP4.45□□□□□ -1.7
DPB2YPR175W AST1P35183 429 aa4.44□□□□□ -1.7
DPB2YPR175W RPE1P46969 238 aa4.44□□□□□ -1.7
DPB2YPR175W YJR141WP47172 347 aaPredicted RBP4.44□□□□□ -1.7
DPB2YPR175W SNO1Q03144 224 aa4.44□□□□□ -1.7
DPB2YPR175W SEC22P22214 214 aa4.43□□□□□ -1.7
DPB2YPR175W TRM5P38793 499 aa4.43□□□□□ -1.7
DPB2YPR175W YER121WP40076 114 aa4.43□□□□□ -1.7
DPB2YPR175W CAT5P41735 233 aa4.43□□□□□ -1.7
DPB2YPR175W RPA43P46669 326 aa4.43□□□□□ -1.7
DPB2YPR175W YDR248CQ03786 193 aa4.43□□□□□ -1.7
DPB2YPR175W YLR030WQ07967 263 aa4.43□□□□□ -1.7
DPB2YPR175W GCN3P14741 305 aa4.42□□□□□ -1.7
DPB2YPR175W CPT1P17898 393 aa4.42□□□□□ -1.7
DPB2YPR175W SNF6P18888 332 aa4.42□□□□□ -1.7
DPB2YPR175W MSA2P36157 363 aa4.42□□□□□ -1.7
DPB2YPR175W TRM7P38238 310 aaKnown RBP4.42□□□□□ -1.7
DPB2YPR175W YGL159WP53110 370 aa4.42□□□□□ -1.7
DPB2YPR175W YGR067CP53243 804 aa4.42□□□□□ -1.7
DPB2YPR175W ARO80Q04052 950 aa4.42□□□□□ -1.7
DPB2YPR175W GGA1Q06336 557 aa4.42□□□□□ -1.7
DPB2YPR175W SMT3Q12306 101 aaKnown RBP4.42□□□□□ -1.7
DPB2YPR175W SUR2P38992 349 aa4.42□□□□□ -1.7
DPB2YPR175W SEO1P39709 593 aa4.42□□□□□ -1.7
DPB2YPR175W ECM14P38836 430 aa4.41□□□□□ -1.7
DPB2YPR175W SNM1P40993 198 aa4.41□□□□□ -1.7
DPB2YPR175W PRR2Q12310 699 aa4.41□□□□□ -1.7
DPB2YPR175W AGC1Q12482 902 aa4.41□□□□□ -1.7
DPB2YPR175W USO1P25386 1790 aa4.4□□□□□ -1.7
DPB2YPR175W TCA17P32613 152 aa4.4□□□□□ -1.71
DPB2YPR175W YKR041WP36134 250 aa4.4□□□□□ -1.71
DPB2YPR175W YER189WP40104 122 aa4.4□□□□□ -1.71
DPB2YPR175W FBA1P14540 359 aaKnown RBP4.39□□□□□ -1.71
DPB2YPR175W APS1P35181 156 aa4.39□□□□□ -1.71
DPB2YPR175W ECM33P38248 429 aaKnown RBP4.39□□□□□ -1.71
DPB2YPR175W COQ5P49017 307 aa4.39□□□□□ -1.71
DPB2YPR175W EFM5P53200 248 aaKnown RBP4.39□□□□□ -1.71
DPB2YPR175W RSM10Q03201 203 aa4.39□□□□□ -1.71
DPB2YPR175W FCF1Q05498 189 aaPredicted RBP4.39□□□□□ -1.71
DPB2YPR175W SPL2P38839 148 aa4.39□□□□□ -1.71
DPB2YPR175W TEM1P38987 245 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms