RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W HOM6P31116 359 aaKnown RBP8.62□□□□□ -1.03
PRE6YOL038W ISC10P32645 267 aa8.62□□□□□ -1.03
PRE6YOL038W SOR1P35497 357 aaKnown RBP8.62□□□□□ -1.03
PRE6YOL038W YIL060WP40519 144 aa8.62□□□□□ -1.03
PRE6YOL038W GPI14P47088 403 aaKnown RBP8.62□□□□□ -1.03
PRE6YOL038W BXI1P48558 297 aa8.62□□□□□ -1.03
PRE6YOL038W YDL186WP48568 277 aa8.62□□□□□ -1.03
PRE6YOL038W MRPL35Q06678 367 aa8.62□□□□□ -1.03
PRE6YOL038W SOR2Q07786 357 aa8.62□□□□□ -1.03
PRE6YOL038W MSH5Q12175 901 aa8.62□□□□□ -1.03
PRE6YOL038W YPR071WQ12346 211 aa8.62□□□□□ -1.03
PRE6YOL038W WHI5Q12416 295 aa8.62□□□□□ -1.03
PRE6YOL038W RPN13O13563 156 aa8.61□□□□□ -1.03
PRE6YOL038W CPR5P35176 225 aa8.61□□□□□ -1.03
PRE6YOL038W PRY2P36110 329 aa8.61□□□□□ -1.03
PRE6YOL038W CCS1P40202 249 aaKnown RBP8.61□□□□□ -1.03
PRE6YOL038W SER2P42941 309 aa8.61□□□□□ -1.03
PRE6YOL038W WWM1P43582 211 aaKnown RBP8.61□□□□□ -1.03
PRE6YOL038W MIX17Q03667 156 aa8.61□□□□□ -1.03
PRE6YOL038W ECM18Q04623 453 aa8.61□□□□□ -1.03
PRE6YOL038W ATG41Q12048 136 aa8.61□□□□□ -1.03
PRE6YOL038W BBP1Q12365 385 aa8.61□□□□□ -1.03
PRE6YOL038W RPS31P05759 152 aaKnown RBP8.6□□□□□ -1.03
PRE6YOL038W CUE1P38428 203 aa8.6□□□□□ -1.03
PRE6YOL038W FIP1P45976 327 aa8.6□□□□□ -1.03
PRE6YOL038W TTI2P47168 421 aa8.6□□□□□ -1.03
PRE6YOL038W YMR130WQ04223 302 aa8.6□□□□□ -1.03
PRE6YOL038W RGC1Q06108 1083 aaKnown RBP8.6□□□□□ -1.03
PRE6YOL038W YGR035W-AQ45U48 73 aa8.6□□□□□ -1.03
PRE6YOL038W CDC34P14682 295 aa8.59□□□□□ -1.03
PRE6YOL038W VMA5P31412 392 aaKnown RBP8.59□□□□□ -1.03
PRE6YOL038W OCH1P31755 480 aa8.59□□□□□ -1.03
PRE6YOL038W TCA17P32613 152 aa8.59□□□□□ -1.03
PRE6YOL038W CBT1P36038 271 aaPredicted RBP8.59□□□□□ -1.03
PRE6YOL038W MBA1P38300 278 aa8.59□□□□□ -1.03
PRE6YOL038W HNT2P49775 206 aa8.59□□□□□ -1.03
PRE6YOL038W RAI1P53063 387 aaKnown RBP8.59□□□□□ -1.03
PRE6YOL038W CTF19Q02732 369 aa8.59□□□□□ -1.03
PRE6YOL038W NGL1Q08213 363 aaKnown RBP8.59□□□□□ -1.03
PRE6YOL038W BUD23P25627 275 aaPredicted RBP8.58□□□□□ -1.04
PRE6YOL038W SUA7P29055 345 aaPredicted RBP8.58□□□□□ -1.04
PRE6YOL038W FCY21P40039 528 aa8.58□□□□□ -1.04
PRE6YOL038W GNA1P43577 159 aaPredicted RBP8.58□□□□□ -1.04
PRE6YOL038W BNA1P47096 177 aa8.58□□□□□ -1.04
PRE6YOL038W STD1Q02794 444 aa8.58□□□□□ -1.04
PRE6YOL038W YPL199CQ08954 240 aa8.58□□□□□ -1.04
PRE6YOL038W ODC2Q99297 307 aa8.58□□□□□ -1.04
PRE6YOL038W RAD52P06778 471 aaKnown RBP8.57□□□□□ -1.04
PRE6YOL038W RFA1P22336 621 aaKnown RBP8.57□□□□□ -1.04
PRE6YOL038W ERG3P32353 365 aa8.57□□□□□ -1.04
PRE6YOL038W PMU1P36069 295 aa8.57□□□□□ -1.04
PRE6YOL038W IPI1P38803 334 aaPredicted RBP8.57□□□□□ -1.04
PRE6YOL038W MIT1P40002 666 aa8.57□□□□□ -1.04
PRE6YOL038W SMB1P40018 196 aaKnown RBP8.57□□□□□ -1.04
PRE6YOL038W BNA6P43619 295 aa8.57□□□□□ -1.04
PRE6YOL038W CWC23P52868 283 aaPredicted RBP8.57□□□□□ -1.04
PRE6YOL038W FIT1Q04433 528 aa8.57□□□□□ -1.04
PRE6YOL038W HOF1Q05080 669 aa8.57□□□□□ -1.04
PRE6YOL038W TFC7Q12415 435 aa8.57□□□□□ -1.04
PRE6YOL038W YCR101CP25607 182 aa8.56□□□□□ -1.04
PRE6YOL038W PRE4P30657 266 aa8.56□□□□□ -1.04
PRE6YOL038W YHK8P38776 514 aa8.56□□□□□ -1.04
PRE6YOL038W PAC2P39937 518 aa8.56□□□□□ -1.04
PRE6YOL038W SYS1P41544 203 aa8.56□□□□□ -1.04
PRE6YOL038W IRC18P47056 224 aa8.56□□□□□ -1.04
PRE6YOL038W IMD3P50095 523 aaKnown RBP8.56□□□□□ -1.04
PRE6YOL038W YGR151CP53287 111 aa8.56□□□□□ -1.04
PRE6YOL038W ERV29P53337 310 aa8.56□□□□□ -1.04
PRE6YOL038W NGL2Q03264 515 aaKnown RBP8.56□□□□□ -1.04
PRE6YOL038W DAL4Q04895 635 aa8.56□□□□□ -1.04
PRE6YOL038W YOR283WQ12040 230 aaKnown RBP8.56□□□□□ -1.04
PRE6YOL038W LAS17Q12446 633 aa8.56□□□□□ -1.04
PRE6YOL038W ADE8P04161 214 aa8.55□□□□□ -1.04
PRE6YOL038W TOM40P23644 387 aaKnown RBP8.55□□□□□ -1.04
PRE6YOL038W NTC20P38302 140 aaPredicted RBP8.55□□□□□ -1.04
PRE6YOL038W OTU1P43558 301 aa8.55□□□□□ -1.04
PRE6YOL038W YJR056CP47115 236 aa8.55□□□□□ -1.04
PRE6YOL038W VHT1P53241 593 aa8.55□□□□□ -1.04
PRE6YOL038W VPS71Q03433 280 aa8.55□□□□□ -1.04
PRE6YOL038W INP53Q12271 1107 aa8.55□□□□□ -1.04
PRE6YOL038W SEC66P33754 206 aa8.54□□□□□ -1.04
PRE6YOL038W HPA3P39979 161 aa8.54□□□□□ -1.04
PRE6YOL038W SKP1P52286 194 aa8.54□□□□□ -1.04
PRE6YOL038W YGR042WP53227 271 aa8.54□□□□□ -1.04
PRE6YOL038W HNT1Q04344 158 aaKnown RBP8.54□□□□□ -1.04
PRE6YOL038W NOC4Q06512 552 aaPredicted RBP8.54□□□□□ -1.04
PRE6YOL038W AAC1P04710 309 aa8.53□□□□□ -1.04
PRE6YOL038W CAP2P13517 287 aa8.53□□□□□ -1.04
PRE6YOL038W BGL2P15703 313 aaKnown RBP8.53□□□□□ -1.04
PRE6YOL038W RFA3P26755 122 aaKnown RBP8.53□□□□□ -1.04
PRE6YOL038W NPL6P32832 435 aa8.53□□□□□ -1.04
PRE6YOL038W REC104P33323 182 aa8.53□□□□□ -1.04
PRE6YOL038W RPB7P34087 171 aa8.53□□□□□ -1.04
PRE6YOL038W RPS0BP46654 252 aaKnown RBP8.53□□□□□ -1.04
PRE6YOL038W GAR1P28007 205 aaKnown RBP8.52□□□□□ -1.05
PRE6YOL038W HTD2P38790 280 aaKnown RBP8.52□□□□□ -1.05
PRE6YOL038W YJL118WP47022 219 aa8.52□□□□□ -1.05
PRE6YOL038W GIM3P53900 129 aa8.52□□□□□ -1.05
PRE6YOL038W CHO1P08456 276 aa8.51□□□□□ -1.05
PRE6YOL038W TIF11P38912 153 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms