RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W YER079WP40052 210 aaKnown RBP5.16□□□□□ -1.58
CAF40YNL288W YIL012WP40551 113 aa5.16□□□□□ -1.58
CAF40YNL288W GLR1P41921 483 aaKnown RBP5.16□□□□□ -1.58
CAF40YNL288W GNA1P43577 159 aaPredicted RBP5.16□□□□□ -1.58
CAF40YNL288W GPI14P47088 403 aaKnown RBP5.16□□□□□ -1.58
CAF40YNL288W BXI1P48558 297 aa5.16□□□□□ -1.58
CAF40YNL288W TAF4P50105 388 aa5.16□□□□□ -1.58
CAF40YNL288W CWC23P52868 283 aaPredicted RBP5.16□□□□□ -1.58
CAF40YNL288W GPG1P53130 126 aa5.16□□□□□ -1.58
CAF40YNL288W MRH4P53166 561 aa5.16□□□□□ -1.58
CAF40YNL288W VHT1P53241 593 aa5.16□□□□□ -1.58
CAF40YNL288W YOR186WQ08560 144 aa5.16□□□□□ -1.58
CAF40YNL288W RPN13O13563 156 aa5.15□□□□□ -1.59
CAF40YNL288W YCR101CP25607 182 aa5.15□□□□□ -1.59
CAF40YNL288W PRE4P30657 266 aa5.15□□□□□ -1.59
CAF40YNL288W ARO4P32449 370 aaKnown RBP5.15□□□□□ -1.59
CAF40YNL288W MSS1P32559 526 aaPredicted RBP5.15□□□□□ -1.59
CAF40YNL288W YBL010CP32788 280 aa5.15□□□□□ -1.59
CAF40YNL288W YKL063CP35725 167 aa5.15□□□□□ -1.59
CAF40YNL288W YHK8P38776 514 aa5.15□□□□□ -1.59
CAF40YNL288W IPI1P38803 334 aaPredicted RBP5.15□□□□□ -1.59
CAF40YNL288W LNP1P38878 278 aa5.15□□□□□ -1.59
CAF40YNL288W AIM20P40451 204 aa5.15□□□□□ -1.59
CAF40YNL288W MRX5P47007 382 aa5.15□□□□□ -1.59
CAF40YNL288W IRC18P47056 224 aa5.15□□□□□ -1.59
CAF40YNL288W BNA2P47125 453 aa5.15□□□□□ -1.59
CAF40YNL288W PEF1P53238 335 aa5.15□□□□□ -1.59
CAF40YNL288W TEX1P53851 422 aaKnown RBP5.15□□□□□ -1.59
CAF40YNL288W INN1P53901 409 aa5.15□□□□□ -1.59
CAF40YNL288W YPL199CQ08954 240 aa5.15□□□□□ -1.59
CAF40YNL288W FCY22Q12119 530 aa5.15□□□□□ -1.59
CAF40YNL288W INP53Q12271 1107 aa5.15□□□□□ -1.59
CAF40YNL288W GEP5Q12393 293 aa5.15□□□□□ -1.59
CAF40YNL288W RPL25P04456 142 aaKnown RBP5.14□□□□□ -1.59
CAF40YNL288W RPL39P04650 51 aa5.14□□□□□ -1.59
CAF40YNL288W SPT14P32363 452 aa5.14□□□□□ -1.59
CAF40YNL288W PRS2P38620 318 aaKnown RBP5.14□□□□□ -1.59
CAF40YNL288W RMD6P39975 231 aa5.14□□□□□ -1.59
CAF40YNL288W SGN1P40561 250 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CAF40YNL288W IMD3P50095 523 aaKnown RBP5.14□□□□□ -1.59
CAF40YNL288W UFD1P53044 361 aa5.14□□□□□ -1.59
CAF40YNL288W BUD25P85052 153 aa5.14□□□□□ -1.59
CAF40YNL288W ASM4Q05166 528 aa5.14□□□□□ -1.59
CAF40YNL288W UPS1Q05776 175 aa5.14□□□□□ -1.59
CAF40YNL288W KEI1Q06346 221 aa5.14□□□□□ -1.59
CAF40YNL288W SNA4Q07549 140 aa5.14□□□□□ -1.59
CAF40YNL288W EAF3Q12432 401 aa5.14□□□□□ -1.59
CAF40YNL288W ERP4Q12450 207 aa5.14□□□□□ -1.59
CAF40YNL288W ODC2Q99297 307 aa5.14□□□□□ -1.59
CAF40YNL288W CDC39P25655 2108 aaKnown RBP5.14□□□□□ -1.59
CAF40YNL288W PET122P10355 254 aa5.13□□□□□ -1.59
CAF40YNL288W URA6P15700 204 aa5.13□□□□□ -1.59
CAF40YNL288W APA2P22108 325 aa5.13□□□□□ -1.59
CAF40YNL288W PCL2P25693 308 aa5.13□□□□□ -1.59
CAF40YNL288W VMA5P31412 392 aaKnown RBP5.13□□□□□ -1.59
CAF40YNL288W HYM1P32464 399 aa5.13□□□□□ -1.59
CAF40YNL288W TCA17P32613 152 aa5.13□□□□□ -1.59
CAF40YNL288W RIB7P33312 244 aa5.13□□□□□ -1.59
CAF40YNL288W HPA3P39979 161 aa5.13□□□□□ -1.59
CAF40YNL288W CCS1P40202 249 aaKnown RBP5.13□□□□□ -1.59
CAF40YNL288W NCA3P46955 337 aa5.13□□□□□ -1.59
CAF40YNL288W TPN1P53099 579 aa5.13□□□□□ -1.59
CAF40YNL288W GEP7P53171 287 aa5.13□□□□□ -1.59
CAF40YNL288W YLR108CQ12259 485 aa5.13□□□□□ -1.59
CAF40YNL288W TMA7Q3E764 64 aaKnown RBP5.13□□□□□ -1.59
CAF40YNL288W REP2P03872 296 aa5.12□□□□□ -1.59
CAF40YNL288W CAP2P13517 287 aa5.12□□□□□ -1.59
CAF40YNL288W IFM1P25038 676 aa5.12□□□□□ -1.59
CAF40YNL288W IMP1P28627 190 aa5.12□□□□□ -1.59
CAF40YNL288W MTC7P32633 139 aa5.12□□□□□ -1.59
CAF40YNL288W MIT1P40002 666 aa5.12□□□□□ -1.59
CAF40YNL288W YIL060WP40519 144 aa5.12□□□□□ -1.59
CAF40YNL288W YIR020CP40575 100 aa5.12□□□□□ -1.59
CAF40YNL288W CAT5P41735 233 aa5.12□□□□□ -1.59
CAF40YNL288W OTU1P43558 301 aa5.12□□□□□ -1.59
CAF40YNL288W GON7P46984 123 aa5.12□□□□□ -1.59
CAF40YNL288W YJL163CP46996 555 aa5.12□□□□□ -1.59
CAF40YNL288W GWT1P47026 490 aa5.12□□□□□ -1.59
CAF40YNL288W ABM1P47146 123 aa5.12□□□□□ -1.59
CAF40YNL288W XPT1P47165 209 aa5.12□□□□□ -1.59
CAF40YNL288W YGR042WP53227 271 aa5.12□□□□□ -1.59
CAF40YNL288W FMP48P53233 369 aa5.12□□□□□ -1.59
CAF40YNL288W SMM1P53720 384 aaKnown RBP5.12□□□□□ -1.59
CAF40YNL288W GIM3P53900 129 aa5.12□□□□□ -1.59
CAF40YNL288W LIP2Q06005 328 aa5.12□□□□□ -1.59
CAF40YNL288W RDL1Q12305 139 aaKnown RBP5.12□□□□□ -1.59
CAF40YNL288W RTR2Q12378 196 aa5.12□□□□□ -1.59
CAF40YNL288W MPD1Q12404 318 aaKnown RBP5.12□□□□□ -1.59
CAF40YNL288W ATG40Q99325 256 aa5.12□□□□□ -1.59
CAF40YNL288W AAC1P04710 309 aa5.11□□□□□ -1.59
CAF40YNL288W ERG3P32353 365 aa5.11□□□□□ -1.59
CAF40YNL288W VAM7P32912 316 aa5.11□□□□□ -1.59
CAF40YNL288W GPI18P38211 433 aa5.11□□□□□ -1.59
CAF40YNL288W CAF16P43569 289 aa5.11□□□□□ -1.59
CAF40YNL288W YNR064CP53750 290 aa5.11□□□□□ -1.59
CAF40YNL288W LSM7P53905 115 aaKnown RBP5.11□□□□□ -1.59
CAF40YNL288W UTP15Q04305 513 aaKnown RBP5.11□□□□□ -1.59
CAF40YNL288W ECM18Q04623 453 aa5.11□□□□□ -1.59
CAF40YNL288W FRE8Q12209 686 aa5.11□□□□□ -1.59
CAF40YNL288W YOR097CQ12274 175 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms