RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	ECM13	P38195	257 aa		3.03	□□□□□ -1.93
PMS1	YNL082W	ADO1	P47143	340 aa	Known RBP	3.02	□□□□□ -1.93
PMS1	YNL082W	MIC26	P50087	233 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	SMD2	Q06217	110 aa	Known RBP	3.02	□□□□□ -1.93
PMS1	YNL082W	YOL019W	Q08157	551 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	TPO4	Q12256	659 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	SWI1	P09547	1314 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	MATALPHA2	P0CY08	210 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	HMLALPHA2	P0CY09	210 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	PPH21	P23594	369 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	ERG2	P32352	222 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	ECM34	P38728	170 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	MCM22	P47167	239 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	CAX4	P53223	239 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	GRE1	Q08969	168 aa		3.02	□□□□□ -1.93
PMS1	YNL082W	CPT1	P17898	393 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	RAD51	P25454	400 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	DRE2	P36152	348 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	YHR127W	P38833	243 aa	Known RBP	3.01	□□□□□ -1.93
PMS1	YNL082W	YER034W	P40022	185 aa	Known RBP	3.01	□□□□□ -1.93
PMS1	YNL082W	DCN1	Q12395	269 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	QCR7	P00128	127 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	YJL028W	P47062	111 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	MDM34	P53083	459 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	PEX10	Q05568	337 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	ATG17	Q06410	417 aa		3.01	□□□□□ -1.93
PMS1	YNL082W	ABP140	Q08641	628 aa	Known RBP	3.01	□□□□□ -1.93
PMS1	YNL082W	MET2	P08465	486 aa		3	□□□□□ -1.93
PMS1	YNL082W	PET191	Q02772	108 aa		3	□□□□□ -1.93
PMS1	YNL082W	FCF1	Q05498	189 aa	Predicted RBP	3	□□□□□ -1.93
PMS1	YNL082W	YPS3	Q12303	508 aa		3	□□□□□ -1.93
PMS1	YNL082W	MER1	P16523	270 aa		3	□□□□□ -1.93
PMS1	YNL082W	CBF1	P17106	351 aa		3	□□□□□ -1.93
PMS1	YNL082W	IKI1	P38874	309 aa		3	□□□□□ -1.93
PMS1	YNL082W	PEX17	P40155	199 aa		3	□□□□□ -1.93
PMS1	YNL082W	RFC4	P40339	323 aa	Known RBP	3	□□□□□ -1.93
PMS1	YNL082W	RHO3	Q00245	231 aa	Known RBP	3	□□□□□ -1.93
PMS1	YNL082W	SNU23	Q12368	194 aa	Predicted RBP	3	□□□□□ -1.93
PMS1	YNL082W	EMP46	Q12396	444 aa		3	□□□□□ -1.93
PMS1	YNL082W	PHO89	P38361	574 aa		2.99	□□□□□ -1.93
PMS1	YNL082W	COQ5	P49017	307 aa		2.99	□□□□□ -1.93
PMS1	YNL082W	CGR1	P53188	120 aa		2.99	□□□□□ -1.93
PMS1	YNL082W	YPR147C	Q06522	304 aa	Known RBP	2.99	□□□□□ -1.93
PMS1	YNL082W	RSM10	Q03201	203 aa		2.99	□□□□□ -1.93
PMS1	YNL082W	CUE1	P38428	203 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	ERG10	P41338	398 aa	Known RBP	2.98	□□□□□ -1.93
PMS1	YNL082W	YFR045W	P43617	309 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
PMS1	YNL082W	RRP40	Q08285	240 aa	Known RBP	2.98	□□□□□ -1.93
PMS1	YNL082W	SYC1	Q08553	188 aa	Predicted RBP	2.98	□□□□□ -1.93
PMS1	YNL082W	PRR2	Q12310	699 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	AGC1	Q12482	902 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	TOR1	P35169	2470 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	HTB1	P02293	131 aa	Known RBP	2.98	□□□□□ -1.93
PMS1	YNL082W	HTB2	P02294	131 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	SGE1	P33335	543 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	FZO1	P38297	855 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	HST4	P53688	370 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	GIM3	P53900	129 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	TVP15	Q03860	143 aa		2.98	□□□□□ -1.93
PMS1	YNL082W	YLR179C	Q06252	201 aa	Known RBP	2.98	□□□□□ -1.93
PMS1	YNL082W	DBF2	P22204	572 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	PRY2	P36110	329 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	TRM7	P38238	310 aa	Known RBP	2.97	□□□□□ -1.93
PMS1	YNL082W	YIL054W	P40524	105 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	RPA43	P46669	326 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	NUP57	P48837	541 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	YRA1	Q12159	226 aa	Known RBP	2.97	□□□□□ -1.93
PMS1	YNL082W	MRX4	Q12467	430 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	YHB1	P39676	399 aa	Known RBP	2.97	□□□□□ -1.93
PMS1	YNL082W	BMT5	P40493	336 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	YBL008W-A	Q3E821	79 aa		2.97	□□□□□ -1.93
PMS1	YNL082W	SUR2	P38992	349 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	CDD1	Q06549	142 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	UBR2	Q07963	1872 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	RPS19A	P07280	144 aa	Known RBP	2.96	□□□□□ -1.94
PMS1	YNL082W	RPS19B	P07281	144 aa	Predicted RBP	2.96	□□□□□ -1.94
PMS1	YNL082W	OAC1	P32332	324 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	YRB2	P40517	327 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	NNT1	Q05874	261 aa		2.96	□□□□□ -1.94
PMS1	YNL082W	YOL163W	P0CF20	169 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	URA6	P15700	204 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	MSA2	P36157	363 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	TRR2	P38816	342 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	COX15	P40086	486 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	BRR6	P53062	197 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	NSA1	P53136	463 aa	Predicted RBP	2.95	□□□□□ -1.94
PMS1	YNL082W	SLX9	P53251	210 aa	Predicted RBP	2.95	□□□□□ -1.94
PMS1	YNL082W	CAB4	P53332	305 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	YLR030W	Q07967	263 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	SMT3	Q12306	101 aa	Known RBP	2.95	□□□□□ -1.94
PMS1	YNL082W	JLP1	Q12358	412 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	CDC28	P00546	298 aa	Known RBP	2.95	□□□□□ -1.94
PMS1	YNL082W	YAK1	P14680	807 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	CUP2	P15315	225 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	SEC22	P22214	214 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	YER084W	P40057	128 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	RPE1	P46969	238 aa		2.95	□□□□□ -1.94
PMS1	YNL082W	SPS18	P32572	300 aa		2.94	□□□□□ -1.94
PMS1	YNL082W	AGA2	P32781	87 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms