RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YML108WQ03759 105 aa1.74□□□□□ -2.13
SMD2YLR275W CDC123Q05791 360 aa1.74□□□□□ -2.13
SMD2YLR275W HEM25Q07534 307 aa1.74□□□□□ -2.13
SMD2YLR275W ATO3Q12359 275 aa1.74□□□□□ -2.13
SMD2YLR275W YHR139C-AO13536 103 aa1.73□□□□□ -2.13
SMD2YLR275W NHP6BP11633 99 aaKnown RBP1.73□□□□□ -2.13
SMD2YLR275W ECM33P38248 429 aaKnown RBP1.73□□□□□ -2.13
SMD2YLR275W YIL001WP40560 513 aa1.73□□□□□ -2.13
SMD2YLR275W MIC26P50087 233 aa1.73□□□□□ -2.13
SMD2YLR275W FYV6P53913 173 aa1.73□□□□□ -2.13
SMD2YLR275W YMD8Q03697 442 aa1.73□□□□□ -2.13
SMD2YLR275W RNH1Q04740 348 aa1.73□□□□□ -2.13
SMD2YLR275W TPO4Q12256 659 aa1.73□□□□□ -2.13
SMD2YLR275W DRS2P39524 1355 aa1.72□□□□□ -2.13
SMD2YLR275W MSW1P04803 379 aa1.72□□□□□ -2.13
SMD2YLR275W URA6P15700 204 aa1.72□□□□□ -2.13
SMD2YLR275W PBN1P25580 416 aa1.72□□□□□ -2.13
SMD2YLR275W DOG1P38774 246 aa1.72□□□□□ -2.13
SMD2YLR275W GCN20P43535 752 aaKnown RBP1.72□□□□□ -2.13
SMD2YLR275W CIS3P47001 227 aa1.72□□□□□ -2.13
SMD2YLR275W YGR219WP53307 113 aa1.72□□□□□ -2.13
SMD2YLR275W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
SMD2YLR275W SEY1Q99287 776 aa1.72□□□□□ -2.13
SMD2YLR275W RPL28P02406 149 aaKnown RBP1.71□□□□□ -2.14
SMD2YLR275W YBR121C-AP0C5L4 52 aa1.71□□□□□ -2.14
SMD2YLR275W GRX2P17695 143 aaKnown RBP1.71□□□□□ -2.14
SMD2YLR275W MDH3P32419 343 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SMD2YLR275W URA8P38627 578 aaPredicted RBP1.71□□□□□ -2.14
SMD2YLR275W RSM25P40496 264 aa1.71□□□□□ -2.14
SMD2YLR275W MSS2P40990 351 aa1.71□□□□□ -2.14
SMD2YLR275W ALG13P53178 202 aa1.71□□□□□ -2.14
SMD2YLR275W MRPS8Q03799 155 aa1.71□□□□□ -2.14
SMD2YLR275W NEJ1Q06148 342 aa1.71□□□□□ -2.14
SMD2YLR275W CDC28P00546 298 aaKnown RBP1.7□□□□□ -2.14
SMD2YLR275W YPR170W-BP0C5R9 85 aa1.7□□□□□ -2.14
SMD2YLR275W FBA1P14540 359 aaKnown RBP1.7□□□□□ -2.14
SMD2YLR275W COQ1P18900 473 aa1.7□□□□□ -2.14
SMD2YLR275W PEX4P29340 183 aa1.7□□□□□ -2.14
SMD2YLR275W DOG2P38773 246 aa1.7□□□□□ -2.14
SMD2YLR275W RTC3P38804 111 aaPredicted RBP1.7□□□□□ -2.14
SMD2YLR275W PEP8P40335 379 aa1.7□□□□□ -2.14
SMD2YLR275W YRB1P41920 201 aaKnown RBP1.7□□□□□ -2.14
SMD2YLR275W NUP57P48837 541 aa1.7□□□□□ -2.14
SMD2YLR275W BRR6P53062 197 aa1.7□□□□□ -2.14
SMD2YLR275W TIM11P81449 96 aaPredicted RBP1.7□□□□□ -2.14
SMD2YLR275W ARR2Q06597 130 aa1.7□□□□□ -2.14
SMD2YLR275W DCN1Q12395 269 aa1.7□□□□□ -2.14
SMD2YLR275W YKL183C-AQ3E765 70 aa1.7□□□□□ -2.14
SMD2YLR275W CDC8P00572 216 aa1.69□□□□□ -2.14
SMD2YLR275W STE18P18852 110 aa1.69□□□□□ -2.14
SMD2YLR275W SCL1P21243 252 aaKnown RBP1.69□□□□□ -2.14
SMD2YLR275W OAC1P32332 324 aa1.69□□□□□ -2.14
SMD2YLR275W SRY1P36007 326 aa1.69□□□□□ -2.14
SMD2YLR275W PHO88P38264 188 aaPredicted RBP1.69□□□□□ -2.14
SMD2YLR275W YHR180WP38868 163 aa1.69□□□□□ -2.14
SMD2YLR275W ERG28P40030 148 aa1.69□□□□□ -2.14
SMD2YLR275W DID2P69771 204 aa1.69□□□□□ -2.14
SMD2YLR275W YDR248CQ03786 193 aa1.69□□□□□ -2.14
SMD2YLR275W RAS2P01120 322 aaKnown RBP1.68□□□□□ -2.14
SMD2YLR275W ARG80P07249 177 aa1.68□□□□□ -2.14
SMD2YLR275W DBF2P22204 572 aa1.68□□□□□ -2.14
SMD2YLR275W PRP18P33411 251 aaPredicted RBP1.68□□□□□ -2.14
SMD2YLR275W CBT1P36038 271 aaPredicted RBP1.68□□□□□ -2.14
SMD2YLR275W ERV15P38312 142 aa1.68□□□□□ -2.14
SMD2YLR275W IRC22P40006 225 aa1.68□□□□□ -2.14
SMD2YLR275W YNL194CP40169 301 aa1.68□□□□□ -2.14
SMD2YLR275W BXI1P48558 297 aa1.68□□□□□ -2.14
SMD2YLR275W ERG25P53045 309 aa1.68□□□□□ -2.14
SMD2YLR275W PRM8P53174 237 aa1.68□□□□□ -2.14
SMD2YLR275W YNL010WP53981 241 aaKnown RBP1.68□□□□□ -2.14
SMD2YLR275W LPP1Q04396 274 aa1.68□□□□□ -2.14
SMD2YLR275W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SMD2YLR275W JLP1Q12358 412 aa1.68□□□□□ -2.14
SMD2YLR275W NCB2Q92317 146 aa1.68□□□□□ -2.14
SMD2YLR275W CDC7P06243 507 aa1.67□□□□□ -2.14
SMD2YLR275W ATG22P25568 528 aa1.67□□□□□ -2.14
SMD2YLR275W YKE4P40544 346 aa1.67□□□□□ -2.14
SMD2YLR275W FAR7P43592 221 aa1.67□□□□□ -2.14
SMD2YLR275W ADO1P47143 340 aaKnown RBP1.67□□□□□ -2.14
SMD2YLR275W RAD17P48581 401 aa1.67□□□□□ -2.14
SMD2YLR275W PGA2P53903 129 aa1.67□□□□□ -2.14
SMD2YLR275W PSF1Q12488 208 aa1.67□□□□□ -2.14
SMD2YLR275W CDC33P07260 213 aaKnown RBP1.66□□□□□ -2.14
SMD2YLR275W NTG1P31378 399 aa1.66□□□□□ -2.14
SMD2YLR275W APS1P35181 156 aa1.66□□□□□ -2.14
SMD2YLR275W MGA1P53050 456 aa1.66□□□□□ -2.14
SMD2YLR275W CYT2Q00873 224 aa1.66□□□□□ -2.14
SMD2YLR275W SNZ1Q03148 297 aa1.66□□□□□ -2.14
SMD2YLR275W BNA7Q04066 261 aa1.66□□□□□ -2.14
SMD2YLR275W TRM12Q04235 462 aa1.66□□□□□ -2.14
SMD2YLR275W USB1Q12208 290 aaKnown RBP1.66□□□□□ -2.14
SMD2YLR275W GIS3Q12418 502 aa1.66□□□□□ -2.14
SMD2YLR275W TDA8Q6B2U8 126 aa1.66□□□□□ -2.14
SMD2YLR275W YDR157WA0A023PZE8 133 aa1.65□□□□□ -2.15
SMD2YLR275W PRX1P34227 261 aaKnown RBP1.65□□□□□ -2.15
SMD2YLR275W POP4P38336 279 aa1.65□□□□□ -2.15
SMD2YLR275W YHR022CP38763 256 aa1.65□□□□□ -2.15
SMD2YLR275W BMT5P40493 336 aa1.65□□□□□ -2.15
SMD2YLR275W PRM10P42946 383 aa1.65□□□□□ -2.15
SMD2YLR275W CWC23P52868 283 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms