RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	CTF19	Q02732	369 aa		4.3	□□□□□ -1.72
CLF1	YLR117C	MSC2	Q03455	724 aa		4.3	□□□□□ -1.72
CLF1	YLR117C	HRI1	Q05905	244 aa	Known RBP	4.3	□□□□□ -1.72
CLF1	YLR117C	ECM22	Q05958	814 aa	Predicted RBP	4.3	□□□□□ -1.72
CLF1	YLR117C	NDD1	Q08887	554 aa		4.3	□□□□□ -1.72
CLF1	YLR117C	CWP1	P28319	239 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	MF(ALPHA)2	P32435	120 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	EMP70	P32802	667 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	PRP18	P33411	251 aa	Predicted RBP	4.29	□□□□□ -1.72
CLF1	YLR117C	PHO88	P38264	188 aa	Predicted RBP	4.29	□□□□□ -1.72
CLF1	YLR117C	JHD1	P40034	492 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	SPG5	P42933	373 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	PFD1	P46988	109 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	PGA1	P53896	198 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	RNH201	P53942	307 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	HHT1	P61830	136 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	HNT1	Q04344	158 aa	Known RBP	4.29	□□□□□ -1.72
CLF1	YLR117C	YML083C	Q04526	418 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	SCW10	Q04951	389 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	ASM4	Q05166	528 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	NMA1	Q06178	401 aa	Known RBP	4.29	□□□□□ -1.72
CLF1	YLR117C	LOA1	Q06508	300 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	YOR015W	Q12169	119 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	TPT1	Q12272	230 aa	Known RBP	4.29	□□□□□ -1.72
CLF1	YLR117C	YDR262W	Q12331	272 aa		4.29	□□□□□ -1.72
CLF1	YLR117C	RPL35A	P0CX84	120 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	RPL35B	P0CX85	120 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	PPZ2	P33329	710 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	IXR1	P33417	597 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	MRPL27	P36526	146 aa	Predicted RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	YPT35	P38815	214 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	FAA3	P39002	694 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	RPL13B	P40212	199 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	YIL161W	P40449	235 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	PET130	P47065	347 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	UBP8	P50102	471 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	ARA2	Q04212	335 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	THI72	Q08579	599 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	PDH1	Q12428	516 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	YCL012C	Q8J0M4	134 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	HIP1	P06775	603 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	CPA1	P07258	411 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	MSF1	P08425	469 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	SPT15	P13393	240 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	HAP4	P14064	554 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	OCH1	P31755	480 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	DCG1	P32460	244 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	MTR2	P34232	184 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	THI80	P35202	319 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	HMF1	P40037	129 aa	Known RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	YIL060W	P40519	144 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	YIL012W	P40551	113 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	OTU1	P43558	301 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	YJR015W	P47090	510 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	MUP1	P50276	574 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	YIP4	P53093	235 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	BOR1	P53838	576 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	YNL260C	P53846	198 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	SMX3	P54999	86 aa	Predicted RBP	4.28	□□□□□ -1.72
CLF1	YLR117C	MRX8	Q05473	314 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	SEI1	Q06058	285 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	TAZ1	Q06510	381 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	YOR338W	Q99326	363 aa		4.28	□□□□□ -1.72
CLF1	YLR117C	COX9	P07255	59 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	MRP49	P32388	137 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	SLC1	P33333	303 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	PAU16	P35994	123 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	RPS20	P38701	121 aa	Known RBP	4.27	□□□□□ -1.73
CLF1	YLR117C	HSP10	P38910	106 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	SDP1	P40479	209 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	GPI14	P47088	403 aa	Known RBP	4.27	□□□□□ -1.73
CLF1	YLR117C	MSY1	P48527	492 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	SGF73	P53165	657 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	EFM6	P53970	246 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	CAB5	Q03941	241 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	POS5	Q06892	414 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	ALG6	Q12001	544 aa	Known RBP	4.27	□□□□□ -1.73
CLF1	YLR117C	YLR050C	Q12155	161 aa	Known RBP	4.27	□□□□□ -1.73
CLF1	YLR117C	FOL3	Q12676	427 aa	Predicted RBP	4.27	□□□□□ -1.73
CLF1	YLR117C	YIR021W-A	Q3E739	70 aa		4.27	□□□□□ -1.73
CLF1	YLR117C	YPR096C	O13587	100 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	POR1	P04840	283 aa	Known RBP	4.26	□□□□□ -1.73
CLF1	YLR117C	SRB5	P32585	307 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	UMP1	P38293	148 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	SLM6	P38343	150 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	EAF5	P39995	279 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	PRM5	P40476	318 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	CIN2	P46670	268 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YJL007C	P47080	104 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	SAM37	P50110	327 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YMR166C	Q03829	368 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	OLE1	P21147	510 aa	Known RBP	4.26	□□□□□ -1.73
CLF1	YLR117C	MIH1	P23748	554 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	MEK1	P24719	497 aa	Predicted RBP	4.26	□□□□□ -1.73
CLF1	YLR117C	YCR007C	P25354	239 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	TRR1	P29509	319 aa	Known RBP	4.26	□□□□□ -1.73
CLF1	YLR117C	MDL1	P33310	695 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	FLO5	P38894	1075 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	YEA6	P39953	335 aa		4.26	□□□□□ -1.73
CLF1	YLR117C	VPS25	P47142	202 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms