RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	PEX17	P40155	199 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	YFR054C	P43622	192 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.27	□□□□□ -2.21	not detected
NUP82	YJL061W	ARR2	Q06597	130 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	HEM25	Q07534	307 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	LSO2	Q3E772	92 aa	Known RBP	1.27	□□□□□ -2.21
NUP82	YJL061W	SPT3	P06844	337 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	RPL24B	P24000	155 aa	Known RBP	1.27	□□□□□ -2.21
NUP82	YJL061W	SSO1	P32867	290 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	NTF2	P33331	125 aa	Known RBP	1.27	□□□□□ -2.21
NUP82	YJL061W	ERV15	P38312	142 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	PEP8	P40335	379 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	YKE4	P40544	346 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	ERV29	P53337	310 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	TPO4	Q12256	659 aa		1.27	□□□□□ -2.21
NUP82	YJL061W	YHR180W	P38868	163 aa		1.26	□□□□□ -2.21
NUP82	YJL061W	VTC1	P40046	129 aa	RIP-Chip data	1.26	□□□□□ -2.21	not detected
NUP82	YJL061W	BMT5	P40493	336 aa		1.26	□□□□□ -2.21
NUP82	YJL061W	DID2	P69771	204 aa		1.26	□□□□□ -2.21
NUP82	YJL061W	DRS2	P39524	1355 aa		1.26	□□□□□ -2.21
NUP82	YJL061W	CDC8	P00572	216 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	RAS2	P01120	322 aa	Known RBP	1.25	□□□□□ -2.21
NUP82	YJL061W	VMA6	P32366	345 aa	Known RBP	1.25	□□□□□ -2.21
NUP82	YJL061W	YHR022C	P38763	256 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	LSM4	P40070	187 aa	Known RBP	1.25	□□□□□ -2.21
NUP82	YJL061W	MIC26	P50087	233 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	TOS8	P53147	276 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	FYV6	P53913	173 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	CYT2	Q00873	224 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	YPR170W-B	P0C5R9	85 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	MDH2	P22133	377 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	BMH2	P34730	273 aa	Known RBP	1.25	□□□□□ -2.21
NUP82	YJL061W	DOG2	P38773	246 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	CDC123	Q05791	360 aa		1.25	□□□□□ -2.21
NUP82	YJL061W	YHR139C-A	O13536	103 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	RHO1	P06780	209 aa	Known RBP	1.24	□□□□□ -2.21
NUP82	YJL061W	URA6	P15700	204 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	PPA2	P28239	310 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	DSE2	P38844	325 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	PRM10	P42946	383 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	YNL010W	P53981	241 aa	Known RBP	1.24	□□□□□ -2.21
NUP82	YJL061W	SVP26	P38869	228 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	RTR1	P40084	226 aa	Predicted RBP	1.24	□□□□□ -2.21
NUP82	YJL061W	PSF1	Q12488	208 aa		1.24	□□□□□ -2.21
NUP82	YJL061W	THP2	O13539	261 aa	Known RBP	1.23	□□□□□ -2.21
NUP82	YJL061W	CDC7	P06243	507 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	DDI2	P0CH63	225 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	DDI3	P0CH64	225 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	YMR31	P19955	123 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	ATG22	P25568	528 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	MIC12	P38341	106 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	TCD1	P38756	429 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	RPL33B	P41056	107 aa	Known RBP	1.23	□□□□□ -2.21
NUP82	YJL061W	BRR6	P53062	197 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	PRM8	P53174	237 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	LPP1	Q04396	274 aa		1.23	□□□□□ -2.21
NUP82	YJL061W	PET9	P18239	318 aa	Known RBP	1.22	□□□□□ -2.21
NUP82	YJL061W	MEI4	P29467	408 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	IRC22	P40006	225 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	YRB1	P41920	201 aa	Known RBP	1.22	□□□□□ -2.21
NUP82	YJL061W	OTU1	P43558	301 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	AIF1	P52923	378 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	YNR062C	P53748	327 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	DCN1	Q12395	269 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	SEY1	Q99287	776 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	CDC28	P00546	298 aa	Known RBP	1.22	□□□□□ -2.21
NUP82	YJL061W	NHP6B	P11633	99 aa	Known RBP	1.22	□□□□□ -2.21
NUP82	YJL061W	SRY1	P36007	326 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	PGD1	P40356	397 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	ICE2	P40499	491 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	AGE2	P40529	298 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	BUD25	P85052	153 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	TRM12	Q04235	462 aa		1.22	□□□□□ -2.21
NUP82	YJL061W	RUD3	Q12234	484 aa	Known RBP	1.22	□□□□□ -2.21
NUP82	YJL061W	RPL28	P02406	149 aa	Known RBP	1.21	□□□□□ -2.22
NUP82	YJL061W	REP2	P03872	296 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	YBR121C-A	P0C5L4	52 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	POP4	P38336	279 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	URA8	P38627	578 aa	Predicted RBP	1.21	□□□□□ -2.22
NUP82	YJL061W	AVT2	P39981	480 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	FAR7	P43592	221 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	BXI1	P48558	297 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	NUP57	P48837	541 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	SNZ1	Q03148	297 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	YDR248C	Q03786	193 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	MRPS28	P21771	286 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	APS1	P35181	156 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	TIR3	P40552	269 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	GCN20	P43535	752 aa	Known RBP	1.21	□□□□□ -2.22
NUP82	YJL061W	ALG13	P53178	202 aa		1.21	□□□□□ -2.22
NUP82	YJL061W	BEM2	P39960	2167 aa	Known RBP	1.2	□□□□□ -2.22
NUP82	YJL061W	PBN1	P25580	416 aa		1.2	□□□□□ -2.22
NUP82	YJL061W	MRPL28	P36527	147 aa		1.2	□□□□□ -2.22
NUP82	YJL061W	JLP1	Q12358	412 aa		1.2	□□□□□ -2.22
NUP82	YJL061W	YKL183C-A	Q3E765	70 aa		1.2	□□□□□ -2.22
NUP82	YJL061W	NCB2	Q92317	146 aa		1.2	□□□□□ -2.22
NUP82	YJL061W	YLR156W	P0CE96	114 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	YLR159W	P0CE97	114 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	YLR161W	P0CE98	114 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	DBF2	P22204	572 aa		1.19	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms