RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C RPL33BP41056 107 aaKnown RBP1.77□□□□□ -2.13
CUP1-2YHR055C TOS8P53147 276 aa1.77□□□□□ -2.13
CUP1-2YHR055C YML108WQ03759 105 aa1.77□□□□□ -2.13
CUP1-2YHR055C ATG31Q12421 196 aa1.77□□□□□ -2.13
CUP1-2YHR055C CUE1P38428 203 aa1.76□□□□□ -2.13
CUP1-2YHR055C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
CUP1-2YHR055C YMD8Q03697 442 aa1.76□□□□□ -2.13
CUP1-2YHR055C SML1Q04964 104 aa1.76□□□□□ -2.13
CUP1-2YHR055C MRPL25P23369 157 aa1.75□□□□□ -2.13
CUP1-2YHR055C YGL010WP25338 174 aa1.75□□□□□ -2.13
CUP1-2YHR055C FMC1P40491 155 aa1.74□□□□□ -2.13
CUP1-2YHR055C ERV29P53337 310 aa1.74□□□□□ -2.13
CUP1-2YHR055C MZM1Q03429 123 aaPredicted RBP1.74□□□□□ -2.13
CUP1-2YHR055C YPL229WQ99395 206 aa1.74□□□□□ -2.13
CUP1-2YHR055C FLO9P39712 1322 aa1.73□□□□□ -2.13
CUP1-2YHR055C TIR3P40552 269 aa1.73□□□□□ -2.13
CUP1-2YHR055C MCM22P47167 239 aa1.73□□□□□ -2.13
CUP1-2YHR055C INO80P53115 1489 aa1.72□□□□□ -2.13
CUP1-2YHR055C YPR170W-BP0C5R9 85 aa1.72□□□□□ -2.13
CUP1-2YHR055C MEI4P29467 408 aa1.72□□□□□ -2.13
CUP1-2YHR055C YBR220CP38318 560 aa1.72□□□□□ -2.13
CUP1-2YHR055C PGD1P40356 397 aa1.72□□□□□ -2.13
CUP1-2YHR055C ICE2P40499 491 aa1.72□□□□□ -2.13
CUP1-2YHR055C NSA1P53136 463 aaPredicted RBP1.72□□□□□ -2.13
CUP1-2YHR055C SRL4Q03085 281 aa1.72□□□□□ -2.13
CUP1-2YHR055C CSI2Q08054 341 aa1.72□□□□□ -2.13
CUP1-2YHR055C FPR1P20081 114 aaKnown RBP1.71□□□□□ -2.14
CUP1-2YHR055C SRB4P32569 687 aa1.71□□□□□ -2.14
CUP1-2YHR055C LDB7P38210 180 aa1.71□□□□□ -2.14
CUP1-2YHR055C PEX17P40155 199 aa1.71□□□□□ -2.14
CUP1-2YHR055C YJR149WP47177 404 aa1.71□□□□□ -2.14
CUP1-2YHR055C TRM9P49957 279 aa1.71□□□□□ -2.14
CUP1-2YHR055C NUP84P52891 726 aa1.71□□□□□ -2.14
CUP1-2YHR055C NUP49Q02199 472 aa1.71□□□□□ -2.14
CUP1-2YHR055C LSO2Q3E772 92 aaKnown RBP1.71□□□□□ -2.14
CUP1-2YHR055C CYR1P08678 2026 aaKnown RBP1.7□□□□□ -2.14
CUP1-2YHR055C AIF1P52923 378 aa1.7□□□□□ -2.14
CUP1-2YHR055C PET117Q02771 107 aa1.7□□□□□ -2.14
CUP1-2YHR055C YLR162WQ06235 118 aa1.7□□□□□ -2.14
CUP1-2YHR055C PSF1Q12488 208 aa1.7□□□□□ -2.14
CUP1-2YHR055C YHR139C-AO13536 103 aa1.69□□□□□ -2.14
CUP1-2YHR055C BCY1P07278 416 aaKnown RBP1.69□□□□□ -2.14
CUP1-2YHR055C MRPS28P21771 286 aa1.69□□□□□ -2.14
CUP1-2YHR055C CDC10P25342 322 aaKnown RBP1.69□□□□□ -2.14
CUP1-2YHR055C YCR016WP25617 290 aaKnown RBP1.69□□□□□ -2.14
CUP1-2YHR055C DOG2P38773 246 aa1.69□□□□□ -2.14
CUP1-2YHR055C GLE2P40066 365 aa1.69□□□□□ -2.14
CUP1-2YHR055C RPL13BP40212 199 aaKnown RBP1.69□□□□□ -2.14
CUP1-2YHR055C YNL010WP53981 241 aaKnown RBP1.69□□□□□ -2.14
CUP1-2YHR055C DID2P69771 204 aa1.69□□□□□ -2.14
CUP1-2YHR055C RRN5Q02983 363 aa1.69□□□□□ -2.14
CUP1-2YHR055C TRM12Q04235 462 aa1.69□□□□□ -2.14
CUP1-2YHR055C RPL13AQ12690 199 aaPredicted RBP1.69□□□□□ -2.14
CUP1-2YHR055C YNL217WP40152 326 aa1.68□□□□□ -2.14
CUP1-2YHR055C DRS2P39524 1355 aa1.68□□□□□ -2.14
CUP1-2YHR055C RPL2AP0CX45 254 aaKnown RBP1.67□□□□□ -2.14
CUP1-2YHR055C RPL2BP0CX46 254 aaKnown RBP1.67□□□□□ -2.14
CUP1-2YHR055C RPO26P20435 155 aa1.67□□□□□ -2.14
CUP1-2YHR055C ATG22P25568 528 aa1.67□□□□□ -2.14
CUP1-2YHR055C FZF1P32805 299 aa1.67□□□□□ -2.14
CUP1-2YHR055C BOL2P53082 120 aa1.67□□□□□ -2.14
CUP1-2YHR055C SNZ1Q03148 297 aa1.67□□□□□ -2.14
CUP1-2YHR055C LPP1Q04396 274 aa1.67□□□□□ -2.14
CUP1-2YHR055C SPG3Q04398 127 aaPredicted RBP1.67□□□□□ -2.14
CUP1-2YHR055C RPL27BP0C2H7 136 aaKnown RBP1.66□□□□□ -2.14
CUP1-2YHR055C NTF2P33331 125 aaKnown RBP1.66□□□□□ -2.14
CUP1-2YHR055C MSN4P33749 630 aa1.66□□□□□ -2.14
CUP1-2YHR055C IRC22P40006 225 aa1.66□□□□□ -2.14
CUP1-2YHR055C YLR283WQ05867 314 aa1.66□□□□□ -2.14
CUP1-2YHR055C REP2P03872 296 aa1.65□□□□□ -2.15
CUP1-2YHR055C SPT3P06844 337 aa1.65□□□□□ -2.15
CUP1-2YHR055C GPA2P10823 449 aa1.65□□□□□ -2.15
CUP1-2YHR055C VPS21P36017 210 aaKnown RBP1.65□□□□□ -2.15
CUP1-2YHR055C COX15P40086 486 aa1.65□□□□□ -2.15
CUP1-2YHR055C PRE6P40303 254 aaKnown RBP1.65□□□□□ -2.15
CUP1-2YHR055C MET5P47169 1442 aa1.65□□□□□ -2.15
CUP1-2YHR055C CFT1Q06632 1357 aaKnown RBP1.64□□□□□ -2.15
CUP1-2YHR055C YET1P35723 206 aa1.64□□□□□ -2.15
CUP1-2YHR055C POP4P38336 279 aa1.64□□□□□ -2.15
CUP1-2YHR055C URA8P38627 578 aaPredicted RBP1.64□□□□□ -2.15
CUP1-2YHR055C FYV6P53913 173 aa1.64□□□□□ -2.15
CUP1-2YHR055C RIO1Q12196 484 aaKnown RBP1.64□□□□□ -2.15
CUP1-2YHR055C URA6P15700 204 aa1.63□□□□□ -2.15
CUP1-2YHR055C SSO1P32867 290 aa1.63□□□□□ -2.15
CUP1-2YHR055C UPS2P35200 230 aa1.63□□□□□ -2.15
CUP1-2YHR055C TMA19P35691 167 aaKnown RBP1.63□□□□□ -2.15
CUP1-2YHR055C MRPL28P36527 147 aa1.63□□□□□ -2.15
CUP1-2YHR055C YRB2P40517 327 aa1.63□□□□□ -2.15
CUP1-2YHR055C RPC17P47076 161 aa1.63□□□□□ -2.15
CUP1-2YHR055C PRM8P53174 237 aa1.63□□□□□ -2.15
CUP1-2YHR055C SAY1P53324 424 aa1.63□□□□□ -2.15
CUP1-2YHR055C YDR248CQ03786 193 aa1.63□□□□□ -2.15
CUP1-2YHR055C YLR156WP0CE96 114 aa1.62□□□□□ -2.15
CUP1-2YHR055C YLR159WP0CE97 114 aa1.62□□□□□ -2.15
CUP1-2YHR055C YLR161WP0CE98 114 aa1.62□□□□□ -2.15
CUP1-2YHR055C MATALPHA1P0CY06 175 aa1.62□□□□□ -2.15
CUP1-2YHR055C HMLALPHA1P0CY07 175 aa1.62□□□□□ -2.15
CUP1-2YHR055C LIA1P47120 325 aaKnown RBP1.62□□□□□ -2.15
CUP1-2YHR055C DOC1P53068 250 aa1.62□□□□□ -2.15
CUP1-2YHR055C QCR8P08525 94 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms