RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YEL077W-AP0CX95 160 aa5.29□□□□□ -1.56
SKN1YGR143W YGR296C-BP0CX96 160 aa5.29□□□□□ -1.56
SKN1YGR143W YPL283W-BP0CX97 160 aa5.29□□□□□ -1.56
SKN1YGR143W YPR204C-AP0CX98 160 aa5.29□□□□□ -1.56
SKN1YGR143W ERG6P25087 383 aaKnown RBP5.29□□□□□ -1.56
SKN1YGR143W SLM5P25345 492 aaKnown RBP5.29□□□□□ -1.56
SKN1YGR143W UTR5P32630 166 aa5.29□□□□□ -1.56
SKN1YGR143W EMP70P32802 667 aa5.29□□□□□ -1.56
SKN1YGR143W TKL2P33315 681 aa5.29□□□□□ -1.56
SKN1YGR143W PMU1P36069 295 aa5.29□□□□□ -1.56
SKN1YGR143W POP1P41812 875 aa5.29□□□□□ -1.56
SKN1YGR143W YFR057WP43625 151 aa5.29□□□□□ -1.56
SKN1YGR143W SAY1P53324 424 aa5.29□□□□□ -1.56
SKN1YGR143W AQR1P53943 586 aa5.29□□□□□ -1.56
SKN1YGR143W AIM34Q03673 198 aa5.29□□□□□ -1.56
SKN1YGR143W BLS1Q06071 122 aa5.29□□□□□ -1.56
SKN1YGR143W THP1Q08231 455 aa5.29□□□□□ -1.56
SKN1YGR143W WTM2Q12206 467 aa5.29□□□□□ -1.56
SKN1YGR143W HSP26P15992 214 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SKN1YGR143W STE18P18852 110 aa5.28□□□□□ -1.56
SKN1YGR143W BET2P20133 325 aa5.28□□□□□ -1.56
SKN1YGR143W MRP49P32388 137 aa5.28□□□□□ -1.56
SKN1YGR143W MTC4P38335 694 aaKnown RBP5.28□□□□□ -1.56
SKN1YGR143W YHR177WP38867 453 aa5.28□□□□□ -1.56
SKN1YGR143W YER076CP40049 302 aa5.28□□□□□ -1.56
SKN1YGR143W HAC1P41546 238 aa5.28□□□□□ -1.56
SKN1YGR143W YJR015WP47090 510 aa5.28□□□□□ -1.56
SKN1YGR143W MTM1P53320 366 aa5.28□□□□□ -1.56
SKN1YGR143W YKR011CQ02209 353 aa5.28□□□□□ -1.56
SKN1YGR143W YMR130WQ04223 302 aa5.28□□□□□ -1.56
SKN1YGR143W ISU2Q12056 156 aa5.28□□□□□ -1.56
SKN1YGR143W HUT1Q12520 339 aa5.28□□□□□ -1.56
SKN1YGR143W YBL029WP38201 376 aa5.28□□□□□ -1.56
SKN1YGR143W POP8P38208 133 aa5.28□□□□□ -1.56
SKN1YGR143W PRE6P40303 254 aaKnown RBP5.28□□□□□ -1.56
SKN1YGR143W SDT1P53078 280 aa5.28□□□□□ -1.56
SKN1YGR143W YNL143CP53908 130 aa5.28□□□□□ -1.56
SKN1YGR143W ATG21Q02887 496 aa5.28□□□□□ -1.56
SKN1YGR143W YMR206WQ03695 313 aa5.28□□□□□ -1.56
SKN1YGR143W VBA1Q04301 562 aa5.28□□□□□ -1.56
SKN1YGR143W DCI1Q08558 271 aa5.28□□□□□ -1.56
SKN1YGR143W RAS2P01120 322 aaKnown RBP5.27□□□□□ -1.57
SKN1YGR143W LRE1P25579 583 aaKnown RBP5.27□□□□□ -1.57
SKN1YGR143W YPT35P38815 214 aaKnown RBP5.27□□□□□ -1.57
SKN1YGR143W PSD1P39006 500 aa5.27□□□□□ -1.57
SKN1YGR143W RRG8Q06109 277 aa5.27□□□□□ -1.57
SKN1YGR143W PAU23Q07987 124 aa5.27□□□□□ -1.57
SKN1YGR143W YPQ1Q12010 308 aa5.27□□□□□ -1.57
SKN1YGR143W PER33Q12144 273 aa5.27□□□□□ -1.57
SKN1YGR143W FRE7Q12333 620 aa5.27□□□□□ -1.57
SKN1YGR143W PAU17Q12370 124 aa5.27□□□□□ -1.57
SKN1YGR143W RDI1Q12434 202 aa5.27□□□□□ -1.57
SKN1YGR143W CPT1P17898 393 aa5.26□□□□□ -1.57
SKN1YGR143W TRR1P29509 319 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W MRPL6P32904 214 aa5.26□□□□□ -1.57
SKN1YGR143W PPZ2P33329 710 aa5.26□□□□□ -1.57
SKN1YGR143W SPT23P35210 1082 aa5.26□□□□□ -1.57
SKN1YGR143W YIL012WP40551 113 aa5.26□□□□□ -1.57
SKN1YGR143W YHC3P47040 408 aa5.26□□□□□ -1.57
SKN1YGR143W COQ5P49017 307 aa5.26□□□□□ -1.57
SKN1YGR143W YIP1P53039 248 aa5.26□□□□□ -1.57
SKN1YGR143W TSA2Q04120 196 aa5.26□□□□□ -1.57
SKN1YGR143W YDR344CQ05510 147 aa5.26□□□□□ -1.57
SKN1YGR143W GPB1Q08886 897 aa5.26□□□□□ -1.57
SKN1YGR143W YOR029WQ12243 111 aa5.26□□□□□ -1.57
SKN1YGR143W MBF1O14467 151 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W CPA1P07258 411 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W YER039C-AP0CD97 72 aa5.26□□□□□ -1.57
SKN1YGR143W YKL151CP36059 337 aa5.26□□□□□ -1.57
SKN1YGR143W MIC12P38341 106 aa5.26□□□□□ -1.57
SKN1YGR143W PAU15P40585 124 aa5.26□□□□□ -1.57
SKN1YGR143W VPS25P47142 202 aa5.26□□□□□ -1.57
SKN1YGR143W GCV1P48015 400 aa5.26□□□□□ -1.57
SKN1YGR143W MPC1P53157 130 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W SYF2P53277 215 aaPredicted RBP5.26□□□□□ -1.57
SKN1YGR143W BIO5P53744 561 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W MOT3P54785 490 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W RSM10Q03201 203 aa5.26□□□□□ -1.57
SKN1YGR143W AVO2Q04749 426 aa5.26□□□□□ -1.57
SKN1YGR143W ERP1Q05359 219 aaKnown RBP5.26□□□□□ -1.57
SKN1YGR143W SWC7Q06707 132 aa5.26□□□□□ -1.57
SKN1YGR143W TOR2P32600 2474 aaKnown RBP5.25□□□□□ -1.57
SKN1YGR143W INO4P13902 151 aa5.25□□□□□ -1.57
SKN1YGR143W ISF1P32488 338 aa5.25□□□□□ -1.57
SKN1YGR143W ROT2P38138 954 aa5.25□□□□□ -1.57
SKN1YGR143W RPL14BP38754 138 aaKnown RBP5.25□□□□□ -1.57
SKN1YGR143W CDC1P40986 491 aa5.25□□□□□ -1.57
SKN1YGR143W SMD3P43321 101 aaKnown RBP5.25□□□□□ -1.57
SKN1YGR143W COX18P53239 316 aa5.25□□□□□ -1.57
SKN1YGR143W FRE4P53746 719 aa5.25□□□□□ -1.57
SKN1YGR143W SUR7P54003 302 aa5.25□□□□□ -1.57
SKN1YGR143W COQ11Q05892 277 aa5.25□□□□□ -1.57
SKN1YGR143W YTH1Q06102 208 aaPredicted RBP5.25□□□□□ -1.57
SKN1YGR143W HEM25Q07534 307 aa5.25□□□□□ -1.57
SKN1YGR143W NDJ1Q12366 352 aa5.25□□□□□ -1.57
SKN1YGR143W CPR2P23285 205 aa5.25□□□□□ -1.57
SKN1YGR143W PUP3P25451 205 aaKnown RBP5.25□□□□□ -1.57
SKN1YGR143W TIP1P27654 210 aaPredicted RBP5.25□□□□□ -1.57
SKN1YGR143W YHR033WP38690 423 aa5.25□□□□□ -1.57
SKN1YGR143W RPL13BP40212 199 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 469.5 ms