RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W KEI1Q06346 221 aa5.74□□□□□ -1.49
NUP49YGL172W PIN3Q06449 215 aa5.74□□□□□ -1.49
NUP49YGL172W GRC3Q07845 632 aa5.74□□□□□ -1.49
NUP49YGL172W EAF3Q12432 401 aa5.74□□□□□ -1.49
NUP49YGL172W FSH3Q99369 266 aa5.74□□□□□ -1.49
NUP49YGL172W Q0142Q9ZZW4 58 aa5.74□□□□□ -1.49
NUP49YGL172W SPS4P09937 338 aa5.74□□□□□ -1.49
NUP49YGL172W CAP2P13517 287 aa5.74□□□□□ -1.49
NUP49YGL172W URA6P15700 204 aa5.74□□□□□ -1.49
NUP49YGL172W YCL042WP25572 119 aa5.74□□□□□ -1.49
NUP49YGL172W VMA5P31412 392 aaKnown RBP5.74□□□□□ -1.49
NUP49YGL172W RNP1P32385 249 aa5.74□□□□□ -1.49
NUP49YGL172W MRPL36P36531 177 aa5.74□□□□□ -1.49
NUP49YGL172W YHR122WP38829 231 aa5.74□□□□□ -1.49
NUP49YGL172W OTU1P43558 301 aa5.74□□□□□ -1.49
NUP49YGL172W TAF4P50105 388 aa5.74□□□□□ -1.49
NUP49YGL172W YOR186WQ08560 144 aa5.74□□□□□ -1.49
NUP49YGL172W FCY22Q12119 530 aa5.74□□□□□ -1.49
NUP49YGL172W CHO1P08456 276 aa5.73□□□□□ -1.49
NUP49YGL172W GCD1P09032 578 aaPredicted RBP5.73□□□□□ -1.49
NUP49YGL172W PET122P10355 254 aa5.73□□□□□ -1.49
NUP49YGL172W RFA3P26755 122 aaKnown RBP5.73□□□□□ -1.49
NUP49YGL172W NOP16P40007 231 aaKnown RBP5.73□□□□□ -1.49
NUP49YGL172W GLR1P41921 483 aaKnown RBP5.73□□□□□ -1.49
NUP49YGL172W GNA1P43577 159 aaPredicted RBP5.73□□□□□ -1.49
NUP49YGL172W INN1P53901 409 aa5.73□□□□□ -1.49
NUP49YGL172W LSM7P53905 115 aaKnown RBP5.73□□□□□ -1.49
NUP49YGL172W YNL046WP53956 172 aa5.73□□□□□ -1.49
NUP49YGL172W MRPL13Q02204 264 aa5.73□□□□□ -1.49
NUP49YGL172W GMC1Q04399 608 aa5.73□□□□□ -1.49
NUP49YGL172W YLR031WQ07978 186 aa5.73□□□□□ -1.49
NUP49YGL172W HTZ1Q12692 134 aaKnown RBP5.73□□□□□ -1.49
NUP49YGL172W CYC1P00044 109 aaPredicted RBP5.72□□□□□ -1.49
NUP49YGL172W GPM1P00950 247 aaKnown RBP5.72□□□□□ -1.49
NUP49YGL172W YLL053CP0CD98 152 aa5.72□□□□□ -1.49
NUP49YGL172W IMP1P28627 190 aa5.72□□□□□ -1.49
NUP49YGL172W YOX1P34161 385 aa5.72□□□□□ -1.49
NUP49YGL172W FIG1P38224 298 aa5.72□□□□□ -1.49
NUP49YGL172W ALG14P38242 237 aa5.72□□□□□ -1.49
NUP49YGL172W CTR2P38865 189 aa5.72□□□□□ -1.49
NUP49YGL172W RMD6P39975 231 aa5.72□□□□□ -1.49
NUP49YGL172W YIL012WP40551 113 aa5.72□□□□□ -1.49
NUP49YGL172W PEF1P53238 335 aa5.72□□□□□ -1.49
NUP49YGL172W TEX1P53851 422 aaKnown RBP5.72□□□□□ -1.49
NUP49YGL172W UTP15Q04305 513 aaKnown RBP5.72□□□□□ -1.49
NUP49YGL172W YMR254CQ04838 102 aa5.72□□□□□ -1.49
NUP49YGL172W PEX10Q05568 337 aa5.72□□□□□ -1.49
NUP49YGL172W MPD1Q12404 318 aaKnown RBP5.72□□□□□ -1.49
NUP49YGL172W Q0297Q9ZZV8 51 aa5.72□□□□□ -1.49
NUP49YGL172W TDH2P00358 332 aaKnown RBP5.71□□□□□ -1.5
NUP49YGL172W RPL3P14126 387 aaKnown RBP5.71□□□□□ -1.5
NUP49YGL172W PEX4P29340 183 aa5.71□□□□□ -1.5
NUP49YGL172W ERG3P32353 365 aa5.71□□□□□ -1.5
NUP49YGL172W HYM1P32464 399 aa5.71□□□□□ -1.5
NUP49YGL172W GON7P46984 123 aa5.71□□□□□ -1.5
NUP49YGL172W MRX5P47007 382 aa5.71□□□□□ -1.5
NUP49YGL172W AIM25P47140 327 aa5.71□□□□□ -1.5
NUP49YGL172W SBH2P52871 88 aa5.71□□□□□ -1.5
NUP49YGL172W TPN1P53099 579 aa5.71□□□□□ -1.5
NUP49YGL172W YPL067CQ02754 198 aa5.71□□□□□ -1.5
NUP49YGL172W PRM15Q03262 622 aa5.71□□□□□ -1.5
NUP49YGL172W SNA4Q07549 140 aa5.71□□□□□ -1.5
NUP49YGL172W PET54P10834 293 aa5.7□□□□□ -1.5
NUP49YGL172W MSS1P32559 526 aaPredicted RBP5.7□□□□□ -1.5
NUP49YGL172W AGA2P32781 87 aa5.7□□□□□ -1.5
NUP49YGL172W YHL044WP38727 235 aa5.7□□□□□ -1.5
NUP49YGL172W LNP1P38878 278 aa5.7□□□□□ -1.5
NUP49YGL172W SLM1P40485 686 aa5.7□□□□□ -1.5
NUP49YGL172W GWT1P47026 490 aa5.7□□□□□ -1.5
NUP49YGL172W CAC2Q04199 468 aa5.7□□□□□ -1.5
NUP49YGL172W PHO92Q06390 306 aa5.7□□□□□ -1.5
NUP49YGL172W FRE8Q12209 686 aa5.7□□□□□ -1.5
NUP49YGL172W YCL048W-AQ2V2Q2 79 aa5.7□□□□□ -1.5
NUP49YGL172W SPO24Q3E752 67 aa5.7□□□□□ -1.5
NUP49YGL172W YCR101CP25607 182 aa5.69□□□□□ -1.5
NUP49YGL172W RIB7P33312 244 aa5.69□□□□□ -1.5
NUP49YGL172W SEC66P33754 206 aa5.69□□□□□ -1.5
NUP49YGL172W PRS2P38620 318 aaKnown RBP5.69□□□□□ -1.5
NUP49YGL172W YKE4P40544 346 aa5.69□□□□□ -1.5
NUP49YGL172W NCA3P46955 337 aa5.69□□□□□ -1.5
NUP49YGL172W RTR2Q12378 196 aa5.69□□□□□ -1.5
NUP49YGL172W GEP5Q12393 293 aa5.69□□□□□ -1.5
NUP49YGL172W ATG40Q99325 256 aa5.69□□□□□ -1.5
NUP49YGL172W YCP4P25349 247 aaKnown RBP5.68□□□□□ -1.5
NUP49YGL172W ZUO1P32527 433 aaKnown RBP5.68□□□□□ -1.5
NUP49YGL172W LSM4P40070 187 aaKnown RBP5.68□□□□□ -1.5
NUP49YGL172W CCS1P40202 249 aaKnown RBP5.68□□□□□ -1.5
NUP49YGL172W SGN1P40561 250 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
NUP49YGL172W YIR020CP40575 100 aa5.68□□□□□ -1.5
NUP49YGL172W YJR011CP47086 261 aaPredicted RBP5.68□□□□□ -1.5
NUP49YGL172W ARO8P53090 500 aaKnown RBP5.68□□□□□ -1.5
NUP49YGL172W RSM27P53305 110 aa5.68□□□□□ -1.5
NUP49YGL172W GIM3P53900 129 aa5.68□□□□□ -1.5
NUP49YGL172W ARG5,6Q01217 863 aa5.68□□□□□ -1.5
NUP49YGL172W UPS1Q05776 175 aa5.68□□□□□ -1.5
NUP49YGL172W YOR029WQ12243 111 aa5.68□□□□□ -1.5
NUP49YGL172W SCM3Q12334 223 aa5.68□□□□□ -1.5
NUP49YGL172W AAC1P04710 309 aa5.67□□□□□ -1.5
NUP49YGL172W CDC23P16522 626 aa5.67□□□□□ -1.5
NUP49YGL172W IFM1P25038 676 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms