RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB3	YFR024C-A	GDH1	P07262	454 aa	Known RBP	7.7	□□□□□ -1.18
LSB3	YFR024C-A	ERG3	P32353	365 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	MSS1	P32559	526 aa	Predicted RBP	7.7	□□□□□ -1.18
LSB3	YFR024C-A	AIM46	P38885	310 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	YER188W	P40103	239 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	YIL060W	P40519	144 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	PIR5	P46999	287 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	HNT2	P49775	206 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	KEI1	Q06346	221 aa		7.7	□□□□□ -1.18
LSB3	YFR024C-A	IFM1	P25038	676 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	SWD2	P36104	329 aa	Predicted RBP	7.69	□□□□□ -1.18
LSB3	YFR024C-A	YHK8	P38776	514 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	FCY21	P40039	528 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	SER2	P42941	309 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	YGR042W	P53227	271 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	OKP1	P53298	406 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	SOG2	Q08817	791 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	RFM1	Q12192	310 aa		7.69	□□□□□ -1.18
LSB3	YFR024C-A	RFA1	P22336	621 aa	Known RBP	7.68	□□□□□ -1.18
LSB3	YFR024C-A	RIB7	P33312	244 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	SOR1	P35497	357 aa	Known RBP	7.68	□□□□□ -1.18
LSB3	YFR024C-A	PAC2	P39937	518 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	OTU1	P43558	301 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	IRC18	P47056	224 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	CWC23	P52868	283 aa	Predicted RBP	7.68	□□□□□ -1.18
LSB3	YFR024C-A	YGR054W	P53235	642 aa	Known RBP	7.68	□□□□□ -1.18
LSB3	YFR024C-A	SOR2	Q07786	357 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	VAM3	Q12241	283 aa		7.68	□□□□□ -1.18
LSB3	YFR024C-A	ATP10	P18496	279 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	OCH1	P31755	480 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	NTC20	P38302	140 aa	Predicted RBP	7.67	□□□□□ -1.18
LSB3	YFR024C-A	CAT5	P41735	233 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	WSC2	P53832	503 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	RPL21A	Q02753	160 aa	Known RBP	7.67	□□□□□ -1.18
LSB3	YFR024C-A	RIM9	Q04734	239 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	YMR317W	Q04893	1140 aa		7.67	□□□□□ -1.18
LSB3	YFR024C-A	RPL21B	Q12672	160 aa	Known RBP	7.67	□□□□□ -1.18
LSB3	YFR024C-A	AAC1	P04710	309 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	YLL053C	P0CD98	152 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	ATG22	P25568	528 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	IPI1	P38803	334 aa	Predicted RBP	7.66	□□□□□ -1.18
LSB3	YFR024C-A	HPA3	P39979	161 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	RAI1	P53063	387 aa	Known RBP	7.66	□□□□□ -1.18
LSB3	YFR024C-A	YGL114W	P53134	725 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	GIM3	P53900	129 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	HSK3	P69852	69 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	ARR2	Q06597	130 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	YPL199C	Q08954	240 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	BBP1	Q12365	385 aa		7.66	□□□□□ -1.18
LSB3	YFR024C-A	RPN13	O13563	156 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	RPL3	P14126	387 aa	Known RBP	7.65	□□□□□ -1.18
LSB3	YFR024C-A	ACH1	P32316	526 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	CPR5	P35176	225 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	SWD3	P38123	315 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	FIG1	P38224	298 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	PRM5	P40476	318 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	TTI2	P47168	421 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	YDR286C	Q05530	114 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	NOC4	Q06512	552 aa	Predicted RBP	7.65	□□□□□ -1.18
LSB3	YFR024C-A	YLR031W	Q07978	186 aa		7.65	□□□□□ -1.18
LSB3	YFR024C-A	URA3	P03962	267 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	ALG14	P38242	237 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	YHR122W	P38829	231 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	MIT1	P40002	666 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	BMT5	P40493	336 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	DIE2	P50076	525 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	SOL1	P50278	321 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	FIT1	Q04433	528 aa		7.64	□□□□□ -1.19
LSB3	YFR024C-A	ADH6	Q04894	360 aa	Known RBP	7.64	□□□□□ -1.19
LSB3	YFR024C-A	PET54	P10834	293 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	SPT14	P32363	452 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	AGA2	P32781	87 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	YBR197C	P38306	217 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	AIM20	P40451	204 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	YJR011C	P47086	261 aa	Predicted RBP	7.63	□□□□□ -1.19
LSB3	YFR024C-A	APJ1	P53940	528 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	TY1A-MR1	Q04215	440 aa		7.63	□□□□□ -1.19
LSB3	YFR024C-A	RNP1	P32385	249 aa		7.62	□□□□□ -1.19
LSB3	YFR024C-A	BNA1	P47096	177 aa		7.62	□□□□□ -1.19
LSB3	YFR024C-A	IMD3	P50095	523 aa	Known RBP	7.62	□□□□□ -1.19
LSB3	YFR024C-A	ALG9	P53868	555 aa	Known RBP	7.62	□□□□□ -1.19
LSB3	YFR024C-A	MED4	Q12343	284 aa		7.62	□□□□□ -1.19
LSB3	YFR024C-A	DGK1	Q12382	290 aa		7.62	□□□□□ -1.19
LSB3	YFR024C-A	YOR192C-C	Q3E736	78 aa		7.62	□□□□□ -1.19
LSB3	YFR024C-A	CYC1	P00044	109 aa	Predicted RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	FUS3	P16892	353 aa	Known RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	GAR1	P28007	205 aa	Known RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	HYM1	P32464	399 aa		7.61	□□□□□ -1.19
LSB3	YFR024C-A	MRPL27	P36526	146 aa	Predicted RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	AIM25	P47140	327 aa		7.61	□□□□□ -1.19
LSB3	YFR024C-A	TPN1	P53099	579 aa		7.61	□□□□□ -1.19
LSB3	YFR024C-A	SLX9	P53251	210 aa	Predicted RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	LSM7	P53905	115 aa	Known RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	HTZ1	Q12692	134 aa	Known RBP	7.61	□□□□□ -1.19
LSB3	YFR024C-A	YLR365W	Q7LIF2	110 aa		7.61	□□□□□ -1.19
LSB3	YFR024C-A	GAL1	P04385	528 aa		7.6	□□□□□ -1.19
LSB3	YFR024C-A	CAP2	P13517	287 aa		7.6	□□□□□ -1.19
LSB3	YFR024C-A	PUP1	P25043	261 aa		7.6	□□□□□ -1.19
LSB3	YFR024C-A	BUD23	P25627	275 aa	Predicted RBP	7.6	□□□□□ -1.19
LSB3	YFR024C-A	FMT1	P32785	401 aa		7.6	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms