RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	MED4	Q12343	284 aa		6.14	□□□□□ -1.43
CDC7	YDL017W	YLR146W-A	Q2V2P1	62 aa		6.14	□□□□□ -1.43
CDC7	YDL017W	Q0144	Q9ZZW2	109 aa		6.14	□□□□□ -1.43
CDC7	YDL017W	RIP1	P08067	215 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	UBI4	P0CG63	381 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	RPL40A	P0CH08	128 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	RPL40B	P0CH09	128 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	OLE1	P21147	510 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	OCH1	P31755	480 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	SRB6	P32570	121 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	RPL13B	P40212	199 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	SSN8	P47821	323 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	RFU1	Q08003	200 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	YDL180W	Q12301	547 aa		6.13	□□□□□ -1.43
CDC7	YDL017W	RPL13A	Q12690	199 aa	Predicted RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	ACC1	Q00955	2233 aa	Known RBP	6.13	□□□□□ -1.43
CDC7	YDL017W	SEC16	P48415	2195 aa	Known RBP	6.12	□□□□□ -1.43
CDC7	YDL017W	LDB16	P25587	256 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	DEG1	P31115	442 aa	Known RBP	6.12	□□□□□ -1.43
CDC7	YDL017W	GLC7	P32598	312 aa	Known RBP	6.12	□□□□□ -1.43
CDC7	YDL017W	REC114	P32841	428 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	MRPL39	P36533	70 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	MTC6	P38849	526 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	LNP1	P38878	278 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	POP2	P39008	433 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	AGX1	P43567	385 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	IKS1	P47042	667 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	YAP6	Q03935	383 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	HRI1	Q05905	244 aa	Known RBP	6.12	□□□□□ -1.43
CDC7	YDL017W	YOR186W	Q08560	144 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	TY1A-DR3	Q12441	440 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	YLR365W	Q7LIF2	110 aa		6.12	□□□□□ -1.43
CDC7	YDL017W	SEN1	Q00416	2231 aa	Known RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	IRA2	P19158	3079 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	ARO3	P14843	370 aa	Known RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	CKA1	P15790	372 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	ZRC1	P20107	442 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	VMA3	P25515	160 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	LDS1	P31379	325 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	ECM25	P32525	599 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	SWD2	P36104	329 aa	Predicted RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	GPI16	P38875	610 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	XBP1	P40489	647 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	GPP1	P41277	250 aa	Known RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	ELA1	P53861	379 aa	Predicted RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	GPI15	P53961	229 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	ERV25	P54837	211 aa	Known RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	VPS28	Q02767	242 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	ERP1	Q05359	219 aa	Known RBP	6.11	□□□□□ -1.43
CDC7	YDL017W	VMA9	Q3E7B6	73 aa		6.11	□□□□□ -1.43
CDC7	YDL017W	SAG1	P20840	650 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	YCR101C	P25607	182 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	VMA8	P32610	256 aa	Known RBP	6.1	□□□□□ -1.43
CDC7	YDL017W	MRPS5	P33759	307 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	ARC40	P38328	384 aa	Known RBP	6.1	□□□□□ -1.43
CDC7	YDL017W	YEA6	P39953	335 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	EMC5	P40540	141 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	IRC24	P40580	263 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	PKP2	P53170	491 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	YNR040W	P53736	256 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	RSM10	Q03201	203 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	YDR391C	Q04170	232 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	YDR286C	Q05530	114 aa		6.1	□□□□□ -1.43
CDC7	YDL017W	FCF2	Q12035	217 aa	Predicted RBP	6.1	□□□□□ -1.43
CDC7	YDL017W	NCE102	Q12207	173 aa	RIP-Chip data	6.1	□□□□□ -1.43	not detected
CDC7	YDL017W	TDH1	P00360	332 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	COQ2	P32378	372 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	RPB7	P34087	171 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	MCH2	P36032	473 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	CCS1	P40202	249 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	YIL024C	P40543	189 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	OST1	P41543	476 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	RPA34	P47006	233 aa	Predicted RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	HAM1	P47119	197 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	MCM22	P47167	239 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	SOL1	P50278	321 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	SLX9	P53251	210 aa	Predicted RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	FMP41	P53889	259 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	YCL001W-A	P87012	153 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	SDO1	Q07953	250 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	PRS5	Q12265	496 aa	Known RBP	6.09	□□□□□ -1.43
CDC7	YDL017W	YPR108W-A	Q3E7B3	70 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	HBN1	Q96VH4	193 aa		6.09	□□□□□ -1.43
CDC7	YDL017W	RPL25	P04456	142 aa	Known RBP	6.09	□□□□□ -1.44
CDC7	YDL017W	MSI1	P13712	422 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	SEC62	P21825	274 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	ATG15	P25641	520 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	ERG2	P32352	222 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	MNS1	P32906	549 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	YER079W	P40052	210 aa	Known RBP	6.09	□□□□□ -1.44
CDC7	YDL017W	APJ1	P53940	528 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	RCE1	Q03530	315 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	FRE8	Q12209	686 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	Q0142	Q9ZZW4	58 aa		6.09	□□□□□ -1.44
CDC7	YDL017W	SPS4	P09937	338 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	RPB10	P22139	70 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	MRS4	P23500	304 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	MSK1	P32048	576 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	YKL162C	P36052	402 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	SWD3	P38123	315 aa		6.08	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms