RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
CTNND1-231ENST00000532463 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PRXQ9BXM0 1461 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 E7EWF7 191 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 M0R2C6 588 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 APOC1P02654 83 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CCNE1P24864 410 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PRIM2P49643 509 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 EXOSC10Q01780 885 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ORC2Q13416 577 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 NCAPHQ15003 741 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 KIZQ2M2Z5 673 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF284Q2VY69 593 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SH3TC2Q8TF17 1288 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 LBHD1Q9BQE6 289 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ADAMTS1Q9UHI8 967 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CDY2AQ9Y6F7 541 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CDY1Q9Y6F8 540 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 TLR2O60603 784 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SKAP2O75563 359 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 OSBPP22059 807 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PSMB9P28065 219 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ARL4DP49703 201 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 AP1S1P61966 158 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CNTN1Q12860 1018 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 TRAF3Q13114 568 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PABPC4Q13310 644 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 UBE2Q1Q7Z7E8 422 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ASAP3Q8TDY4 903 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 WNK4Q96J92 1243 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 AP1S3Q96PC3 154 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 TRAPPC9Q96Q05 1148 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SP110Q9HB58 689 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 FOXO3O43524 673 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 RTN3O95197 1032 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PRLP01236 227 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ZCCHC18P0CG32 403 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ACADLP28330 430 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PPP3CCP48454 512 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SRP54P61011 504 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PTPN21Q16825 1174 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 C5orf22Q49AR2 442 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 IZUMO3Q5VZ72 239 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ADCK2Q7Z695 626 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 EEF2KMTQ96G04 330 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 NDST4Q9H3R1 872 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 POLG2Q9UHN1 485 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 NDUFB9Q9Y6M9 179 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SCAF11Q99590 1463 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CCDC182A6NF36 153 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 IGF2BP3O00425 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 RPN2P04844 631 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 FOSL1P15407 271 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 COPAP53621 1224 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 RESTQ13127 1097 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 SUGP1Q8IWZ8 645 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 TTC29Q8NA56 475 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 CHMP1AQ9HD42 196 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 ALG13Q9NP73 1137 aaKnown RBP8.5□□□□□ -1.05
CTNND1-231ENST00000532463 EURLQ9NYK6 297 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 PFDN2Q9UHV9 154 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 STAP1Q9ULZ2 295 aa8.5□□□□□ -1.05
CTNND1-231ENST00000532463 A0A0X1KG70 313 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CCT8L1PA6NM43 557 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TRIM66O15016 1216 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 LSM1O15116 133 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PHGDHO43175 533 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TBC1D12O60347 775 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 DARSP14868 501 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ITGA3P26006 1051 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TUBA3CQ13748 450 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 LRIG3Q6UXM1 1119 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 DSTYKQ6XUX3 929 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PRPF39Q86UA1 669 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ADI1Q9BV57 179 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 OSBPL8Q9BZF1 889 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ROGDIQ9GZN7 287 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 MGAT4AQ9UM21 535 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 BAIAP2Q9UQB8 552 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF532Q9HCE3 1301 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 RAD51BO15315 384 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 MFAP3LO75121 409 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CDH16O75309 829 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 MYL2P10916 166 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 FCGR1AP12314 374 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 BCAR1P56945 870 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 STK4Q13043 487 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms