RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W ARO3P14843 370 aaKnown RBP8.11□□□□□ -1.11
BRR1YPR057W YCR061WP25639 631 aa8.11□□□□□ -1.11
BRR1YPR057W DEG1P31115 442 aaKnown RBP8.11□□□□□ -1.11
BRR1YPR057W SUA5P32579 426 aa8.11□□□□□ -1.11
BRR1YPR057W REC114P32841 428 aa8.11□□□□□ -1.11
BRR1YPR057W POP8P38208 133 aa8.11□□□□□ -1.11
BRR1YPR057W YPC1P38298 316 aa8.11□□□□□ -1.11
BRR1YPR057W BFR1P38934 470 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
BRR1YPR057W VMA7P39111 118 aa8.11□□□□□ -1.11
BRR1YPR057W YER084WP40057 128 aa8.11□□□□□ -1.11
BRR1YPR057W MID1P41821 548 aa8.11□□□□□ -1.11
BRR1YPR057W UFD1P53044 361 aa8.11□□□□□ -1.11
BRR1YPR057W NIF3P53081 288 aa8.11□□□□□ -1.11
BRR1YPR057W ALG9P53868 555 aaKnown RBP8.11□□□□□ -1.11
BRR1YPR057W SCP1Q08873 200 aa8.11□□□□□ -1.11
BRR1YPR057W TFB5Q3E7C1 72 aaPredicted RBP8.11□□□□□ -1.11
BRR1YPR057W PEX4P29340 183 aa8.1□□□□□ -1.11
BRR1YPR057W MCH2P36032 473 aa8.1□□□□□ -1.11
BRR1YPR057W ARC40P38328 384 aaKnown RBP8.1□□□□□ -1.11
BRR1YPR057W STS1P38637 319 aa8.1□□□□□ -1.11
BRR1YPR057W PTI1P39927 425 aaPredicted RBP8.1□□□□□ -1.11
BRR1YPR057W GPP1P41277 250 aaKnown RBP8.1□□□□□ -1.11
BRR1YPR057W SSN8P47821 323 aa8.1□□□□□ -1.11
BRR1YPR057W JAC1P53193 184 aa8.1□□□□□ -1.11
BRR1YPR057W IRA1P18963 3092 aa8.1□□□□□ -1.11
BRR1YPR057W BLM10P43583 2143 aa8.09□□□□□ -1.11
BRR1YPR057W HEM4P06174 275 aa8.09□□□□□ -1.11
BRR1YPR057W SAG1P20840 650 aa8.09□□□□□ -1.11
BRR1YPR057W MAG1P22134 296 aaKnown RBP8.09□□□□□ -1.11
BRR1YPR057W YBR197CP38306 217 aa8.09□□□□□ -1.11
BRR1YPR057W XBP1P40489 647 aa8.09□□□□□ -1.11
BRR1YPR057W RPS0BP46654 252 aaKnown RBP8.09□□□□□ -1.11
BRR1YPR057W YJR011CP47086 261 aaPredicted RBP8.09□□□□□ -1.11
BRR1YPR057W NRG1Q03125 231 aa8.09□□□□□ -1.11
BRR1YPR057W FIT3Q08907 204 aa8.09□□□□□ -1.11
BRR1YPR057W ATG31Q12421 196 aa8.09□□□□□ -1.11
BRR1YPR057W UBA3Q99344 299 aa8.09□□□□□ -1.11
BRR1YPR057W GAL1P04385 528 aa8.08□□□□□ -1.12
BRR1YPR057W SPS4P09937 338 aa8.08□□□□□ -1.12
BRR1YPR057W FIG1P38224 298 aa8.08□□□□□ -1.12
BRR1YPR057W OST1P41543 476 aaKnown RBP8.08□□□□□ -1.12
BRR1YPR057W UBP8P50102 471 aa8.08□□□□□ -1.12
BRR1YPR057W YIP5P53108 310 aa8.08□□□□□ -1.12
BRR1YPR057W SUR7P54003 302 aa8.08□□□□□ -1.12
BRR1YPR057W CAB5Q03941 241 aa8.08□□□□□ -1.12
BRR1YPR057W RTT103Q05543 409 aa8.08□□□□□ -1.12
BRR1YPR057W YOR186WQ08560 144 aa8.08□□□□□ -1.12
BRR1YPR057W FEX2Q08991 375 aa8.08□□□□□ -1.12
BRR1YPR057W NCE102Q12207 173 aaRIP-Chip data8.08□□□□□ -1.12not detected
BRR1YPR057W FOL3Q12676 427 aaPredicted RBP8.08□□□□□ -1.12
BRR1YPR057W TPI1P00942 248 aaKnown RBP8.07□□□□□ -1.12
BRR1YPR057W YLL053CP0CD98 152 aa8.07□□□□□ -1.12
BRR1YPR057W MSI1P13712 422 aa8.07□□□□□ -1.12
BRR1YPR057W MIR1P23641 311 aaKnown RBP8.07□□□□□ -1.12
BRR1YPR057W YCR101CP25607 182 aa8.07□□□□□ -1.12
BRR1YPR057W MRP20P32387 263 aa8.07□□□□□ -1.12
BRR1YPR057W FAT1P38225 669 aa8.07□□□□□ -1.12
BRR1YPR057W YMR144WP40214 342 aaKnown RBP8.07□□□□□ -1.12
BRR1YPR057W FLX1P40464 311 aa8.07□□□□□ -1.12
BRR1YPR057W YIL029CP40538 142 aa8.07□□□□□ -1.12
BRR1YPR057W YGL260WP53056 76 aa8.07□□□□□ -1.12
BRR1YPR057W SRP1Q02821 542 aaKnown RBP8.07□□□□□ -1.12
BRR1YPR057W DLT1Q04216 342 aa8.07□□□□□ -1.12
BRR1YPR057W RRS1Q08746 203 aaKnown RBP8.07□□□□□ -1.12
BRR1YPR057W FEX1Q08913 375 aa8.07□□□□□ -1.12
BRR1YPR057W VAM3Q12241 283 aa8.07□□□□□ -1.12
BRR1YPR057W MED4Q12343 284 aa8.07□□□□□ -1.12
BRR1YPR057W TFC7Q12415 435 aa8.07□□□□□ -1.12
BRR1YPR057W REP2P03872 296 aa8.06□□□□□ -1.12
BRR1YPR057W RPL25P04456 142 aaKnown RBP8.06□□□□□ -1.12
BRR1YPR057W RPL35AP0CX84 120 aaKnown RBP8.06□□□□□ -1.12
BRR1YPR057W RPL35BP0CX85 120 aaKnown RBP8.06□□□□□ -1.12
BRR1YPR057W SEN2P16658 377 aa8.06□□□□□ -1.12
BRR1YPR057W SEC22P22214 214 aa8.06□□□□□ -1.12
BRR1YPR057W OCH1P31755 480 aa8.06□□□□□ -1.12
BRR1YPR057W COS8P38723 381 aa8.06□□□□□ -1.12
BRR1YPR057W YER079WP40052 210 aaKnown RBP8.06□□□□□ -1.12
BRR1YPR057W BMT5P40493 336 aa8.06□□□□□ -1.12
BRR1YPR057W TAD2P47058 250 aa8.06□□□□□ -1.12
BRR1YPR057W SIP18P50263 79 aa8.06□□□□□ -1.12
BRR1YPR057W DID2P69771 204 aa8.06□□□□□ -1.12
BRR1YPR057W YPR098CQ06089 161 aa8.06□□□□□ -1.12
BRR1YPR057W ANT1Q06497 328 aa8.06□□□□□ -1.12
BRR1YPR057W YDL218WQ07629 317 aa8.06□□□□□ -1.12
BRR1YPR057W AEP3Q12089 606 aa8.06□□□□□ -1.12
BRR1YPR057W SEC16P48415 2195 aaKnown RBP8.05□□□□□ -1.12
BRR1YPR057W QCR2P07257 368 aa8.05□□□□□ -1.12
BRR1YPR057W MET3P08536 511 aa8.05□□□□□ -1.12
BRR1YPR057W DBP2P24783 546 aaKnown RBP8.05□□□□□ -1.12
BRR1YPR057W GLC7P32598 312 aaKnown RBP8.05□□□□□ -1.12
BRR1YPR057W CLB6P32943 380 aa8.05□□□□□ -1.12
BRR1YPR057W LAG1P38703 411 aa8.05□□□□□ -1.12
BRR1YPR057W CCS1P40202 249 aaKnown RBP8.05□□□□□ -1.12
BRR1YPR057W HAS1Q03532 505 aaKnown RBP8.05□□□□□ -1.12
BRR1YPR057W THI74Q04083 370 aa8.05□□□□□ -1.12
BRR1YPR057W PIN3Q06449 215 aa8.05□□□□□ -1.12
BRR1YPR057W NOC4Q06512 552 aaPredicted RBP8.05□□□□□ -1.12
BRR1YPR057W EAF3Q12432 401 aa8.05□□□□□ -1.12
BRR1YPR057W YBR085C-AO43137 85 aa8.04□□□□□ -1.12
BRR1YPR057W TIP1P27654 210 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms