RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W ECM18Q04623 453 aa8.44□□□□□ -1.06
MSF1YPR047W MCM21Q06675 368 aa8.44□□□□□ -1.06
MSF1YPR047W RFM1Q12192 310 aa8.44□□□□□ -1.06
MSF1YPR047W YGR035W-AQ45U48 73 aa8.44□□□□□ -1.06
MSF1YPR047W AHC2P25649 128 aa8.43□□□□□ -1.06
MSF1YPR047W SUA7P29055 345 aaPredicted RBP8.43□□□□□ -1.06
MSF1YPR047W SOR1P35497 357 aaKnown RBP8.43□□□□□ -1.06
MSF1YPR047W SFK1P35735 353 aa8.43□□□□□ -1.06
MSF1YPR047W PSD1P39006 500 aa8.43□□□□□ -1.06
MSF1YPR047W BUD8P41698 603 aa8.43□□□□□ -1.06
MSF1YPR047W TAX4P47030 604 aa8.43□□□□□ -1.06
MSF1YPR047W OKP1P53298 406 aa8.43□□□□□ -1.06
MSF1YPR047W SCW4P53334 386 aaKnown RBP8.43□□□□□ -1.06
MSF1YPR047W TMA10Q06177 86 aa8.43□□□□□ -1.06
MSF1YPR047W SOR2Q07786 357 aa8.43□□□□□ -1.06
MSF1YPR047W YER190C-BP0CX94 160 aa8.42□□□□□ -1.06
MSF1YPR047W YEL077W-AP0CX95 160 aa8.42□□□□□ -1.06
MSF1YPR047W YGR296C-BP0CX96 160 aa8.42□□□□□ -1.06
MSF1YPR047W YPL283W-BP0CX97 160 aa8.42□□□□□ -1.06
MSF1YPR047W YPR204C-AP0CX98 160 aa8.42□□□□□ -1.06
MSF1YPR047W YFL068WP0CX99 160 aa8.42□□□□□ -1.06
MSF1YPR047W YLL066W-AP0CY00 160 aa8.42□□□□□ -1.06
MSF1YPR047W YLL067W-AP0CY01 160 aa8.42□□□□□ -1.06
MSF1YPR047W PAU2P32612 120 aa8.42□□□□□ -1.06
MSF1YPR047W MRPL36P36531 177 aa8.42□□□□□ -1.06
MSF1YPR047W CCZ1P38273 704 aa8.42□□□□□ -1.06
MSF1YPR047W RPS0BP46654 252 aaKnown RBP8.42□□□□□ -1.06
MSF1YPR047W YGR045CP53229 120 aa8.42□□□□□ -1.06
MSF1YPR047W YMR166CQ03829 368 aa8.42□□□□□ -1.06
MSF1YPR047W YLR099W-AQ3E798 87 aa8.42□□□□□ -1.06
MSF1YPR047W YLR358CO13565 187 aa8.41□□□□□ -1.06
MSF1YPR047W PHO4P07270 312 aaKnown RBP8.41□□□□□ -1.06
MSF1YPR047W PET122P10355 254 aa8.41□□□□□ -1.06
MSF1YPR047W SEC66P33754 206 aa8.41□□□□□ -1.06
MSF1YPR047W SWD2P36104 329 aaPredicted RBP8.41□□□□□ -1.06
MSF1YPR047W YCR041WP37265 110 aa8.41□□□□□ -1.06
MSF1YPR047W ADH5P38113 351 aaKnown RBP8.41□□□□□ -1.06
MSF1YPR047W AIM20P40451 204 aa8.41□□□□□ -1.06
MSF1YPR047W SCW11P53189 542 aa8.41□□□□□ -1.06
MSF1YPR047W RPL21AQ02753 160 aaKnown RBP8.41□□□□□ -1.06
MSF1YPR047W RRP17Q04031 235 aaPredicted RBP8.41□□□□□ -1.06
MSF1YPR047W WHI5Q12416 295 aa8.41□□□□□ -1.06
MSF1YPR047W RPL21BQ12672 160 aaKnown RBP8.41□□□□□ -1.06
MSF1YPR047W ERG24P32462 438 aaKnown RBP8.4□□□□□ -1.06
MSF1YPR047W UMP1P38293 148 aa8.4□□□□□ -1.06
MSF1YPR047W PRS2P38620 318 aaKnown RBP8.4□□□□□ -1.06
MSF1YPR047W MID1P41821 548 aa8.4□□□□□ -1.06
MSF1YPR047W CNE1P27825 502 aa8.39□□□□□ -1.07
MSF1YPR047W PEX4P29340 183 aa8.39□□□□□ -1.07
MSF1YPR047W YKL063CP35725 167 aa8.39□□□□□ -1.07
MSF1YPR047W TTI2P47168 421 aa8.39□□□□□ -1.07
MSF1YPR047W VAM3Q12241 283 aa8.39□□□□□ -1.07
MSF1YPR047W RBD2Q12270 262 aa8.39□□□□□ -1.07
MSF1YPR047W BBP1Q12365 385 aa8.39□□□□□ -1.07
MSF1YPR047W ATG40Q99325 256 aa8.39□□□□□ -1.07
MSF1YPR047W MET17P06106 444 aa8.38□□□□□ -1.07
MSF1YPR047W CDC31P06704 161 aaKnown RBP8.38□□□□□ -1.07
MSF1YPR047W RAD52P06778 471 aaKnown RBP8.38□□□□□ -1.07
MSF1YPR047W ATG22P25568 528 aa8.38□□□□□ -1.07
MSF1YPR047W SRL3P36167 246 aa8.38□□□□□ -1.07
MSF1YPR047W PAC2P39937 518 aa8.38□□□□□ -1.07
MSF1YPR047W AGE2P40529 298 aa8.38□□□□□ -1.07
MSF1YPR047W RPA14P50106 137 aa8.38□□□□□ -1.07
MSF1YPR047W NEJ1Q06148 342 aa8.38□□□□□ -1.07
MSF1YPR047W YEL009C-AA0A023PZF2 135 aa8.37□□□□□ -1.07
MSF1YPR047W YCR101CP25607 182 aa8.37□□□□□ -1.07
MSF1YPR047W ARO4P32449 370 aaKnown RBP8.37□□□□□ -1.07
MSF1YPR047W MAK3Q03503 176 aa8.37□□□□□ -1.07
MSF1YPR047W QCR7P00128 127 aa8.37□□□□□ -1.07
MSF1YPR047W FUR4P05316 633 aaKnown RBP8.37□□□□□ -1.07
MSF1YPR047W PET18P25362 215 aa8.37□□□□□ -1.07
MSF1YPR047W PRE4P30657 266 aa8.37□□□□□ -1.07
MSF1YPR047W MTC7P32633 139 aa8.37□□□□□ -1.07
MSF1YPR047W YBL010CP32788 280 aa8.37□□□□□ -1.07
MSF1YPR047W RIB7P33312 244 aa8.37□□□□□ -1.07
MSF1YPR047W CCS1P40202 249 aaKnown RBP8.37□□□□□ -1.07
MSF1YPR047W GNA1P43577 159 aaPredicted RBP8.37□□□□□ -1.07
MSF1YPR047W YFL015CP43578 164 aa8.37□□□□□ -1.07
MSF1YPR047W DOC1P53068 250 aa8.37□□□□□ -1.07
MSF1YPR047W HSK3P69852 69 aa8.37□□□□□ -1.07
MSF1YPR047W YPR071WQ12346 211 aa8.37□□□□□ -1.07
MSF1YPR047W GCN4P03069 281 aa8.36□□□□□ -1.07
MSF1YPR047W ILV5P06168 395 aaKnown RBP8.36□□□□□ -1.07
MSF1YPR047W CPR5P35176 225 aa8.36□□□□□ -1.07
MSF1YPR047W CBT1P36038 271 aaPredicted RBP8.36□□□□□ -1.07
MSF1YPR047W FIG1P38224 298 aa8.36□□□□□ -1.07
MSF1YPR047W YAE1P47118 141 aaPredicted RBP8.36□□□□□ -1.07
MSF1YPR047W BGL2P15703 313 aaKnown RBP8.35□□□□□ -1.07
MSF1YPR047W PHO85P17157 305 aa8.35□□□□□ -1.07
MSF1YPR047W EFM3P47163 339 aa8.35□□□□□ -1.07
MSF1YPR047W YGL262WP53054 175 aa8.35□□□□□ -1.07
MSF1YPR047W NGL2Q03264 515 aaKnown RBP8.35□□□□□ -1.07
MSF1YPR047W TIR4Q12218 487 aaPredicted RBP8.35□□□□□ -1.07
MSF1YPR047W SHE2P36068 246 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
MSF1YPR047W PRE3P38624 215 aa8.34□□□□□ -1.07
MSF1YPR047W HNT2P49775 206 aa8.34□□□□□ -1.07
MSF1YPR047W CTF19Q02732 369 aa8.34□□□□□ -1.07
MSF1YPR047W SOG2Q08817 791 aa8.34□□□□□ -1.07
MSF1YPR047W RPS31P05759 152 aaKnown RBP8.33□□□□□ -1.08
MSF1YPR047W TOM40P23644 387 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms