RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C COX5AP00424 153 aa1.94□□□□□ -2.1
CUP9YPL177C RPS5P26783 225 aaKnown RBP1.94□□□□□ -2.1
CUP9YPL177C LDB7P38210 180 aa1.94□□□□□ -2.1
CUP9YPL177C CTR2P38865 189 aa1.94□□□□□ -2.1
CUP9YPL177C INM2Q05533 292 aa1.94□□□□□ -2.1
CUP9YPL177C SEI1Q06058 285 aa1.94□□□□□ -2.1
CUP9YPL177C YPL229WQ99395 206 aa1.94□□□□□ -2.1
CUP9YPL177C IPP1P00817 287 aaKnown RBP1.93□□□□□ -2.1
CUP9YPL177C PUT1P09368 476 aa1.93□□□□□ -2.1
CUP9YPL177C DSF1P0CX08 502 aa1.93□□□□□ -2.1
CUP9YPL177C YNR073CP0CX09 502 aa1.93□□□□□ -2.1
CUP9YPL177C YKL075CP36083 450 aa1.93□□□□□ -2.1
CUP9YPL177C GTR2P53290 341 aa1.93□□□□□ -2.1
CUP9YPL177C PET117Q02771 107 aa1.93□□□□□ -2.1
CUP9YPL177C SRL4Q03085 281 aa1.93□□□□□ -2.1
CUP9YPL177C CFT1Q06632 1357 aaKnown RBP1.93□□□□□ -2.1
CUP9YPL177C ERD2P18414 219 aa1.92□□□□□ -2.1
CUP9YPL177C FMC1P40491 155 aa1.92□□□□□ -2.1
CUP9YPL177C YPL257WQ08974 193 aa1.92□□□□□ -2.1
CUP9YPL177C AKR2Q12013 749 aa1.92□□□□□ -2.1
CUP9YPL177C YHR139C-AO13536 103 aa1.91□□□□□ -2.1
CUP9YPL177C MATALPHA1P0CY06 175 aa1.91□□□□□ -2.1
CUP9YPL177C HMLALPHA1P0CY07 175 aa1.91□□□□□ -2.1
CUP9YPL177C VMA11P32842 164 aa1.91□□□□□ -2.1
CUP9YPL177C YMR144WP40214 342 aaKnown RBP1.91□□□□□ -2.1
CUP9YPL177C YGR026WP53217 278 aa1.91□□□□□ -2.1
CUP9YPL177C YMR279CQ03263 540 aa1.91□□□□□ -2.1
CUP9YPL177C KRE28Q04431 385 aa1.91□□□□□ -2.1
CUP9YPL177C HTL1Q9URQ5 78 aa1.91□□□□□ -2.1
CUP9YPL177C YCR016WP25617 290 aaKnown RBP1.9□□□□□ -2.11
CUP9YPL177C YPT52P36018 234 aaKnown RBP1.9□□□□□ -2.11
CUP9YPL177C FIS1P40515 155 aa1.9□□□□□ -2.11
CUP9YPL177C CAT5P41735 233 aa1.9□□□□□ -2.11
CUP9YPL177C RMR1P53060 241 aa1.9□□□□□ -2.11
CUP9YPL177C ATG39Q06159 398 aa1.9□□□□□ -2.11
CUP9YPL177C NIP7Q08962 181 aaKnown RBP1.9□□□□□ -2.11
CUP9YPL177C ATO3Q12359 275 aa1.9□□□□□ -2.11
CUP9YPL177C FKS1P38631 1876 aaKnown RBP1.9□□□□□ -2.11
CUP9YPL177C RAS2P01120 322 aaKnown RBP1.89□□□□□ -2.11
CUP9YPL177C RPO26P20435 155 aa1.89□□□□□ -2.11
CUP9YPL177C MRPL25P23369 157 aa1.89□□□□□ -2.11
CUP9YPL177C MSN4P33749 630 aa1.89□□□□□ -2.11
CUP9YPL177C NUP84P52891 726 aa1.89□□□□□ -2.11
CUP9YPL177C PRM15Q03262 622 aa1.89□□□□□ -2.11
CUP9YPL177C SIR4P11978 1358 aa1.88□□□□□ -2.11
CUP9YPL177C ADH3P07246 375 aaKnown RBP1.88□□□□□ -2.11
CUP9YPL177C SNA3P14359 133 aa1.88□□□□□ -2.11
CUP9YPL177C SRB4P32569 687 aa1.88□□□□□ -2.11
CUP9YPL177C RPA43P46669 326 aa1.88□□□□□ -2.11
CUP9YPL177C TRM9P49957 279 aa1.88□□□□□ -2.11
CUP9YPL177C TIM11P81449 96 aaPredicted RBP1.88□□□□□ -2.11
CUP9YPL177C FCY2P17064 533 aa1.87□□□□□ -2.11
CUP9YPL177C RIB1P38066 345 aa1.87□□□□□ -2.11
CUP9YPL177C RPF1P38805 295 aaKnown RBP1.87□□□□□ -2.11
CUP9YPL177C YAR068WP39564 161 aa1.87□□□□□ -2.11
CUP9YPL177C BAT2P47176 376 aaKnown RBP1.87□□□□□ -2.11
CUP9YPL177C YJR149WP47177 404 aa1.87□□□□□ -2.11
CUP9YPL177C MRPS8Q03799 155 aa1.87□□□□□ -2.11
CUP9YPL177C RNH1Q04740 348 aa1.87□□□□□ -2.11
CUP9YPL177C PEX4P29340 183 aa1.86□□□□□ -2.11
CUP9YPL177C NTF2P33331 125 aaKnown RBP1.86□□□□□ -2.11
CUP9YPL177C CUE1P38428 203 aa1.86□□□□□ -2.11
CUP9YPL177C DOG1P38774 246 aa1.86□□□□□ -2.11
CUP9YPL177C CIS3P47001 227 aa1.86□□□□□ -2.11
CUP9YPL177C HAM1P47119 197 aaKnown RBP1.86□□□□□ -2.11
CUP9YPL177C TOS8P53147 276 aa1.86□□□□□ -2.11
CUP9YPL177C YLR283WQ05867 314 aa1.86□□□□□ -2.11
CUP9YPL177C YOR020W-AQ3E824 90 aa1.86□□□□□ -2.11
CUP9YPL177C RPL9AP05738 191 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C SCL1P21243 252 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C CDC10P25342 322 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C ECM33P38248 429 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C LSM4P40070 187 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C PEX17P40155 199 aa1.85□□□□□ -2.11
CUP9YPL177C YJR056CP47115 236 aa1.85□□□□□ -2.11
CUP9YPL177C LIA1P47120 325 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C ILM1P47155 203 aa1.85□□□□□ -2.11
CUP9YPL177C RPL9BP51401 191 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C YGR219WP53307 113 aa1.85□□□□□ -2.11
CUP9YPL177C ERV29P53337 310 aa1.85□□□□□ -2.11
CUP9YPL177C NOP13P53883 403 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CUP9YPL177C DAD3P69850 94 aa1.85□□□□□ -2.11
CUP9YPL177C GRX3Q03835 250 aa1.85□□□□□ -2.11
CUP9YPL177C RUD3Q12234 484 aaKnown RBP1.85□□□□□ -2.11
CUP9YPL177C MSW1P04803 379 aa1.84□□□□□ -2.11
CUP9YPL177C GRX2P17695 143 aaKnown RBP1.84□□□□□ -2.11
CUP9YPL177C VPS21P36017 210 aaKnown RBP1.84□□□□□ -2.11
CUP9YPL177C YHR180WP38868 163 aa1.84□□□□□ -2.11
CUP9YPL177C YER085CP40058 173 aa1.84□□□□□ -2.11
CUP9YPL177C YIL001WP40560 513 aa1.84□□□□□ -2.11
CUP9YPL177C MCM22P47167 239 aa1.84□□□□□ -2.11
CUP9YPL177C YML096WQ04489 525 aa1.84□□□□□ -2.11
CUP9YPL177C ARR2Q06597 130 aa1.84□□□□□ -2.11
CUP9YPL177C HEM25Q07534 307 aa1.84□□□□□ -2.11
CUP9YPL177C RHO1P06780 209 aaKnown RBP1.83□□□□□ -2.12
CUP9YPL177C FBA1P14540 359 aaKnown RBP1.83□□□□□ -2.12
CUP9YPL177C MDH3P32419 343 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CUP9YPL177C YBR063CP38083 404 aa1.83□□□□□ -2.12
CUP9YPL177C AYR1P40471 297 aa1.83□□□□□ -2.12
CUP9YPL177C YFR054CP43622 192 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms