RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SGA1P08019 549 aa1.51□□□□□ -2.17
BRO1YPL084W MRPL25P23369 157 aa1.51□□□□□ -2.17
BRO1YPL084W YCR102CP25608 368 aa1.51□□□□□ -2.17
BRO1YPL084W RCN1P36054 211 aa1.51□□□□□ -2.17
BRO1YPL084W MSA2P36157 363 aa1.51□□□□□ -2.17
BRO1YPL084W NOP13P53883 403 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
BRO1YPL084W RSM10Q03201 203 aa1.51□□□□□ -2.17
BRO1YPL084W SEI1Q06058 285 aa1.51□□□□□ -2.17
BRO1YPL084W BBP1Q12365 385 aa1.51□□□□□ -2.17
BRO1YPL084W VPS15P22219 1454 aa1.51□□□□□ -2.17
BRO1YPL084W RPS5P26783 225 aaKnown RBP1.5□□□□□ -2.17
BRO1YPL084W YKL075CP36083 450 aa1.5□□□□□ -2.17
BRO1YPL084W YJR146WP47174 117 aa1.5□□□□□ -2.17
BRO1YPL084W DSK2P48510 373 aa1.5□□□□□ -2.17
BRO1YPL084W CAB4P53332 305 aa1.5□□□□□ -2.17
BRO1YPL084W SUE1Q06524 206 aa1.5□□□□□ -2.17
BRO1YPL084W TY1B-NL2Q99337 1749 aaKnown RBP1.5□□□□□ -2.17
BRO1YPL084W YLR462WO13556 202 aa1.5□□□□□ -2.17
BRO1YPL084W RPL26AP05743 127 aaKnown RBP1.5□□□□□ -2.17
BRO1YPL084W RPO26P20435 155 aa1.5□□□□□ -2.17
BRO1YPL084W CUE1P38428 203 aa1.5□□□□□ -2.17
BRO1YPL084W YEL075CP39972 122 aa1.5□□□□□ -2.17
BRO1YPL084W RTR1P40084 226 aaPredicted RBP1.5□□□□□ -2.17
BRO1YPL084W COG3P40094 801 aa1.5□□□□□ -2.17
BRO1YPL084W YMR144WP40214 342 aaKnown RBP1.5□□□□□ -2.17
BRO1YPL084W OST2P46964 130 aa1.5□□□□□ -2.17
BRO1YPL084W YGL159WP53110 370 aa1.5□□□□□ -2.17
BRO1YPL084W RPL26BP53221 127 aaKnown RBP1.5□□□□□ -2.17
BRO1YPL084W YNL046WP53956 172 aa1.5□□□□□ -2.17
BRO1YPL084W SPO77Q06134 477 aa1.5□□□□□ -2.17
BRO1YPL084W SAS5Q99314 248 aa1.5□□□□□ -2.17
BRO1YPL084W SPP41P38904 1435 aa1.5□□□□□ -2.17
BRO1YPL084W DNF3Q12674 1656 aa1.5□□□□□ -2.17
BRO1YPL084W COS8P38723 381 aa1.49□□□□□ -2.17
BRO1YPL084W YJL016WP47072 561 aa1.49□□□□□ -2.17
BRO1YPL084W PEX12Q04370 399 aa1.49□□□□□ -2.17
BRO1YPL084W RNH1Q04740 348 aa1.49□□□□□ -2.17
BRO1YPL084W CDD1Q06549 142 aa1.49□□□□□ -2.17
BRO1YPL084W YLR030WQ07967 263 aa1.49□□□□□ -2.17
BRO1YPL084W MSA1Q08471 629 aa1.49□□□□□ -2.17
BRO1YPL084W IML1P47170 1584 aa1.49□□□□□ -2.17
BRO1YPL084W IPP1P00817 287 aaKnown RBP1.49□□□□□ -2.17
BRO1YPL084W RHO1P06780 209 aaKnown RBP1.49□□□□□ -2.17
BRO1YPL084W ERG24P32462 438 aaKnown RBP1.49□□□□□ -2.17
BRO1YPL084W VPS21P36017 210 aaKnown RBP1.49□□□□□ -2.17
BRO1YPL084W TIF34P40217 347 aaKnown RBP1.49□□□□□ -2.17
BRO1YPL084W RPC17P47076 161 aa1.49□□□□□ -2.17
BRO1YPL084W SLM2P53955 656 aa1.49□□□□□ -2.17
BRO1YPL084W VPS68Q12016 184 aa1.49□□□□□ -2.17
BRO1YPL084W YPK9Q12697 1472 aa1.49□□□□□ -2.17
BRO1YPL084W PPA2P28239 310 aa1.48□□□□□ -2.17
BRO1YPL084W BMH2P34730 273 aaKnown RBP1.48□□□□□ -2.17
BRO1YPL084W TRM9P49957 279 aa1.48□□□□□ -2.17
BRO1YPL084W RGM1Q00453 211 aa1.48□□□□□ -2.17
BRO1YPL084W FAR8Q05040 523 aa1.48□□□□□ -2.17
BRO1YPL084W YPR172WQ06608 200 aa1.48□□□□□ -2.17
BRO1YPL084W XRN1P22147 1528 aaKnown RBP1.48□□□□□ -2.17
BRO1YPL084W GDB1Q06625 1536 aa1.48□□□□□ -2.17
BRO1YPL084W CUP1-1P0CX80 61 aa1.48□□□□□ -2.17
BRO1YPL084W CUP1-2P0CX81 61 aa1.48□□□□□ -2.17
BRO1YPL084W ERD2P18414 219 aa1.48□□□□□ -2.17
BRO1YPL084W CDC10P25342 322 aaKnown RBP1.48□□□□□ -2.17
BRO1YPL084W MIC12P38341 106 aa1.48□□□□□ -2.17
BRO1YPL084W TCD1P38756 429 aa1.48□□□□□ -2.17
BRO1YPL084W INM2Q05533 292 aa1.48□□□□□ -2.17
BRO1YPL084W DCR2Q05924 578 aa1.48□□□□□ -2.17
BRO1YPL084W YPL229WQ99395 206 aa1.48□□□□□ -2.17
BRO1YPL084W TOP2P06786 1428 aaKnown RBP1.48□□□□□ -2.17
BRO1YPL084W BCK1Q01389 1478 aa1.48□□□□□ -2.17
BRO1YPL084W THP2O13539 261 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W YHR032W-AP0C5N6 59 aa1.47□□□□□ -2.17
BRO1YPL084W SNA3P14359 133 aa1.47□□□□□ -2.17
BRO1YPL084W RPL24BP24000 155 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W VMA6P32366 345 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W CLB6P32943 380 aa1.47□□□□□ -2.17
BRO1YPL084W ARC15P40518 154 aaRIP-Chip data1.47□□□□□ -2.17 RIP-Chip
BRO1YPL084W TIM11P81449 96 aaPredicted RBP1.47□□□□□ -2.17
BRO1YPL084W YPL257WQ08974 193 aa1.47□□□□□ -2.17
BRO1YPL084W NTF2P33331 125 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W OTU1P43558 301 aa1.47□□□□□ -2.17
BRO1YPL084W YJR149WP47177 404 aa1.47□□□□□ -2.17
BRO1YPL084W IGO1P53897 168 aa1.47□□□□□ -2.17
BRO1YPL084W RUD3Q12234 484 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W YRF1-2P40105 1681 aa1.47□□□□□ -2.17
BRO1YPL084W SPT6P23615 1451 aaKnown RBP1.47□□□□□ -2.17
BRO1YPL084W MMS22Q06164 1454 aa1.47□□□□□ -2.17
BRO1YPL084W Q0255P03881 472 aa1.46□□□□□ -2.18
BRO1YPL084W DSF1P0CX08 502 aa1.46□□□□□ -2.18
BRO1YPL084W YNR073CP0CX09 502 aa1.46□□□□□ -2.18
BRO1YPL084W SNF6P18888 332 aa1.46□□□□□ -2.18
BRO1YPL084W CCA1P21269 546 aa1.46□□□□□ -2.18
BRO1YPL084W YHL026CP38740 315 aa1.46□□□□□ -2.18
BRO1YPL084W YHR125WP38831 101 aa1.46□□□□□ -2.18
BRO1YPL084W CAT5P41735 233 aa1.46□□□□□ -2.18
BRO1YPL084W MCM22P47167 239 aa1.46□□□□□ -2.18
BRO1YPL084W GTR2P53290 341 aa1.46□□□□□ -2.18
BRO1YPL084W COS6P53344 381 aa1.46□□□□□ -2.18
BRO1YPL084W HTL1Q9URQ5 78 aa1.46□□□□□ -2.18
BRO1YPL084W SMC4Q12267 1418 aa1.46□□□□□ -2.18
BRO1YPL084W YMR31P19955 123 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms