RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W SPT3P06844 337 aa2.55□□□□□ -2
TRM112YNR046W SWI1P09547 1314 aa2.55□□□□□ -2
TRM112YNR046W PRP18P33411 251 aaPredicted RBP2.55□□□□□ -2
TRM112YNR046W RCN1P36054 211 aa2.55□□□□□ -2
TRM112YNR046W YGP1P38616 354 aaKnown RBP2.55□□□□□ -2
TRM112YNR046W URA8P38627 578 aaPredicted RBP2.55□□□□□ -2
TRM112YNR046W COS8P38723 381 aa2.55□□□□□ -2
TRM112YNR046W YER034WP40022 185 aaKnown RBP2.55□□□□□ -2
TRM112YNR046W FAR8Q05040 523 aa2.55□□□□□ -2
TRM112YNR046W SMD2Q06217 110 aaKnown RBP2.55□□□□□ -2
TRM112YNR046W YLR179CQ06252 201 aaKnown RBP2.55□□□□□ -2
TRM112YNR046W ADF1Q2V2Q1 113 aa2.55□□□□□ -2
TRM112YNR046W RPL28P02406 149 aaKnown RBP2.54□□□□□ -2
TRM112YNR046W ERD2P18414 219 aa2.54□□□□□ -2
TRM112YNR046W SEC22P22214 214 aa2.54□□□□□ -2
TRM112YNR046W CBT1P36038 271 aaPredicted RBP2.54□□□□□ -2
TRM112YNR046W RTC3P38804 111 aaPredicted RBP2.54□□□□□ -2
TRM112YNR046W ERG28P40030 148 aa2.54□□□□□ -2
TRM112YNR046W RMR1P53060 241 aa2.54□□□□□ -2
TRM112YNR046W YML108WQ03759 105 aa2.54□□□□□ -2
TRM112YNR046W YMR114CQ04471 368 aaKnown RBP2.54□□□□□ -2
TRM112YNR046W YMR226CQ05016 267 aaKnown RBP2.54□□□□□ -2
TRM112YNR046W FEX1Q08913 375 aa2.54□□□□□ -2
TRM112YNR046W FEX2Q08991 375 aa2.54□□□□□ -2
TRM112YNR046W DCN1Q12395 269 aa2.54□□□□□ -2
TRM112YNR046W YKL183C-AQ3E765 70 aa2.54□□□□□ -2
TRM112YNR046W CCH1P50077 2039 aa2.54□□□□□ -2
TRM112YNR046W CDC33P07260 213 aaKnown RBP2.53□□□□□ -2
TRM112YNR046W SIP3P38717 1229 aa2.53□□□□□ -2
TRM112YNR046W SPO73P40031 143 aa2.53□□□□□ -2
TRM112YNR046W OST2P46964 130 aa2.53□□□□□ -2
TRM112YNR046W YJL144WP47009 104 aa2.53□□□□□ -2
TRM112YNR046W HAM1P47119 197 aaKnown RBP2.53□□□□□ -2
TRM112YNR046W YJR149WP47177 404 aa2.53□□□□□ -2
TRM112YNR046W NUP57P48837 541 aa2.53□□□□□ -2
TRM112YNR046W YPL257WQ08974 193 aa2.53□□□□□ -2
TRM112YNR046W TPO4Q12256 659 aa2.53□□□□□ -2
TRM112YNR046W JLP1Q12358 412 aa2.53□□□□□ -2
TRM112YNR046W AGC1Q12482 902 aa2.53□□□□□ -2
TRM112YNR046W HTL1Q9URQ5 78 aa2.53□□□□□ -2
TRM112YNR046W URA6P15700 204 aa2.52□□□□□ -2.01
TRM112YNR046W KRE1P17260 313 aa2.52□□□□□ -2.01
TRM112YNR046W MIG1P27705 504 aa2.52□□□□□ -2.01
TRM112YNR046W ERG24P32462 438 aaKnown RBP2.52□□□□□ -2.01
TRM112YNR046W YKR032WP36127 104 aa2.52□□□□□ -2.01
TRM112YNR046W GON7P46984 123 aa2.52□□□□□ -2.01
TRM112YNR046W HOP2P53187 214 aa2.52□□□□□ -2.01
TRM112YNR046W SYF2P53277 215 aaPredicted RBP2.52□□□□□ -2.01
TRM112YNR046W INM2Q05533 292 aa2.52□□□□□ -2.01
TRM112YNR046W BBP1Q12365 385 aa2.52□□□□□ -2.01
TRM112YNR046W SIR4P11978 1358 aa2.51□□□□□ -2.01
TRM112YNR046W ADH3P07246 375 aaKnown RBP2.51□□□□□ -2.01
TRM112YNR046W SGA1P08019 549 aa2.51□□□□□ -2.01
TRM112YNR046W ASF2P32448 525 aaPredicted RBP2.51□□□□□ -2.01
TRM112YNR046W YER084WP40057 128 aa2.51□□□□□ -2.01
TRM112YNR046W YNL194CP40169 301 aa2.51□□□□□ -2.01
TRM112YNR046W CAT5P41735 233 aa2.51□□□□□ -2.01
TRM112YNR046W PIR5P46999 287 aa2.51□□□□□ -2.01
TRM112YNR046W BRR6P53062 197 aa2.51□□□□□ -2.01
TRM112YNR046W YGL159WP53110 370 aa2.51□□□□□ -2.01
TRM112YNR046W ALG13P53178 202 aa2.51□□□□□ -2.01
TRM112YNR046W GTR2P53290 341 aa2.51□□□□□ -2.01
TRM112YNR046W GIM3P53900 129 aa2.51□□□□□ -2.01
TRM112YNR046W SNZ1Q03148 297 aa2.51□□□□□ -2.01
TRM112YNR046W YLR030WQ07967 263 aa2.51□□□□□ -2.01
TRM112YNR046W SAS5Q99314 248 aa2.51□□□□□ -2.01
TRM112YNR046W DRS2P39524 1355 aa2.5□□□□□ -2.01
TRM112YNR046W MSA2P36157 363 aa2.5□□□□□ -2.01
TRM112YNR046W TIF34P40217 347 aaKnown RBP2.5□□□□□ -2.01
TRM112YNR046W FIS1P40515 155 aa2.5□□□□□ -2.01
TRM112YNR046W YJL016WP47072 561 aa2.5□□□□□ -2.01
TRM112YNR046W ADO1P47143 340 aaKnown RBP2.5□□□□□ -2.01
TRM112YNR046W ABF2Q02486 183 aa2.5□□□□□ -2.01
TRM112YNR046W GRH1Q04410 372 aaKnown RBP2.5□□□□□ -2.01
TRM112YNR046W YML096WQ04489 525 aa2.5□□□□□ -2.01
TRM112YNR046W SSQ1Q05931 657 aaPredicted RBP2.5□□□□□ -2.01
TRM112YNR046W YOR268CQ08734 132 aa2.5□□□□□ -2.01
TRM112YNR046W LSO2Q3E772 92 aaKnown RBP2.5□□□□□ -2.01
TRM112YNR046W YOR020W-AQ3E824 90 aa2.5□□□□□ -2.01
TRM112YNR046W JIP3O13555 125 aa2.49□□□□□ -2.01
TRM112YNR046W COX5AP00424 153 aa2.49□□□□□ -2.01
TRM112YNR046W DPM1P14020 267 aaKnown RBP2.49□□□□□ -2.01
TRM112YNR046W IDH1P28834 360 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
TRM112YNR046W SDH4P37298 181 aa2.49□□□□□ -2.01
TRM112YNR046W PEX17P40155 199 aa2.49□□□□□ -2.01
TRM112YNR046W RFC4P40339 323 aaKnown RBP2.49□□□□□ -2.01
TRM112YNR046W ARC15P40518 154 aaRIP-Chip data2.49□□□□□ -2.01not detected
TRM112YNR046W CWC23P52868 283 aaPredicted RBP2.49□□□□□ -2.01
TRM112YNR046W MGA1P53050 456 aa2.49□□□□□ -2.01
TRM112YNR046W TOS8P53147 276 aa2.49□□□□□ -2.01
TRM112YNR046W CUS2P53830 285 aaPredicted RBP2.49□□□□□ -2.01
TRM112YNR046W YNL247WP53852 767 aaKnown RBP2.49□□□□□ -2.01
TRM112YNR046W RSM10Q03201 203 aa2.49□□□□□ -2.01
TRM112YNR046W MRPS17Q03246 237 aaPredicted RBP2.49□□□□□ -2.01
TRM112YNR046W YMD8Q03697 442 aa2.49□□□□□ -2.01
TRM112YNR046W PEX12Q04370 399 aa2.49□□□□□ -2.01
TRM112YNR046W MSA1Q08471 629 aa2.49□□□□□ -2.01
TRM112YNR046W YRA1Q12159 226 aaKnown RBP2.49□□□□□ -2.01
TRM112YNR046W DSF1P0CX08 502 aa2.48□□□□□ -2.01
TRM112YNR046W YNR073CP0CX09 502 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms