RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YFR057WP43625 151 aa2.46□□□□□ -2.02
CAF120YNL278W PYK2P52489 506 aaKnown RBP2.46□□□□□ -2.02
CAF120YNL278W YGR079WP53249 370 aa2.46□□□□□ -2.02
CAF120YNL278W GTF1P53260 183 aaPredicted RBP2.46□□□□□ -2.02
CAF120YNL278W IZH1Q03419 316 aa2.46□□□□□ -2.02
CAF120YNL278W YMR087WQ04299 284 aa2.46□□□□□ -2.02
CAF120YNL278W SDH7Q04401 133 aa2.46□□□□□ -2.02
CAF120YNL278W ELP6Q04868 273 aa2.46□□□□□ -2.02
CAF120YNL278W YLR346CQ06139 101 aa2.46□□□□□ -2.02
CAF120YNL278W HRD1Q08109 551 aa2.46□□□□□ -2.02
CAF120YNL278W NCE102Q12207 173 aaRIP-Chip data2.46□□□□□ -2.02not detected
CAF120YNL278W USB1Q12208 290 aaKnown RBP2.46□□□□□ -2.02
CAF120YNL278W SLO1Q3E784 85 aa2.46□□□□□ -2.02
CAF120YNL278W ADH2P00331 348 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W CDC7P06243 507 aa2.45□□□□□ -2.02
CAF120YNL278W MRP2P10663 115 aaPredicted RBP2.45□□□□□ -2.02
CAF120YNL278W CPT1P17898 393 aa2.45□□□□□ -2.02
CAF120YNL278W MAK32P23060 363 aa2.45□□□□□ -2.02
CAF120YNL278W GPI12P23797 304 aa2.45□□□□□ -2.02
CAF120YNL278W AHC2P25649 128 aa2.45□□□□□ -2.02
CAF120YNL278W NDC1P32500 655 aa2.45□□□□□ -2.02
CAF120YNL278W SFC1P33303 322 aa2.45□□□□□ -2.02
CAF120YNL278W OAR1P35731 278 aa2.45□□□□□ -2.02
CAF120YNL278W COS9P36034 407 aa2.45□□□□□ -2.02
CAF120YNL278W MRPL15P36523 253 aa2.45□□□□□ -2.02
CAF120YNL278W GEP4P38812 185 aa2.45□□□□□ -2.02
CAF120YNL278W RRG9P40156 214 aa2.45□□□□□ -2.02
CAF120YNL278W CIN2P46670 268 aa2.45□□□□□ -2.02
CAF120YNL278W ASG7P46993 209 aa2.45□□□□□ -2.02
CAF120YNL278W YGR149WP48236 432 aa2.45□□□□□ -2.02
CAF120YNL278W AIF1P52923 378 aa2.45□□□□□ -2.02
CAF120YNL278W BOR1P53838 576 aa2.45□□□□□ -2.02
CAF120YNL278W AIM34Q03673 198 aa2.45□□□□□ -2.02
CAF120YNL278W PEX30Q06169 523 aa2.45□□□□□ -2.02
CAF120YNL278W YLR030WQ07967 263 aa2.45□□□□□ -2.02
CAF120YNL278W TPO4Q12256 659 aa2.45□□□□□ -2.02
CAF120YNL278W DGK1Q12382 290 aa2.45□□□□□ -2.02
CAF120YNL278W TRM13Q12383 476 aa2.45□□□□□ -2.02
CAF120YNL278W RRI1Q12468 440 aa2.45□□□□□ -2.02
CAF120YNL278W RPB8P20436 146 aa2.45□□□□□ -2.02
CAF120YNL278W EHD3P28817 500 aa2.45□□□□□ -2.02
CAF120YNL278W SUA7P29055 345 aaPredicted RBP2.45□□□□□ -2.02
CAF120YNL278W PTM1P32857 523 aa2.45□□□□□ -2.02
CAF120YNL278W CLB6P32943 380 aa2.45□□□□□ -2.02
CAF120YNL278W LHP1P33399 275 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W YKL102CP34249 101 aa2.45□□□□□ -2.02
CAF120YNL278W PHD1P36093 366 aa2.45□□□□□ -2.02
CAF120YNL278W RRN10P38204 145 aa2.45□□□□□ -2.02
CAF120YNL278W VBA2P38358 474 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W TDA11P38854 504 aa2.45□□□□□ -2.02
CAF120YNL278W CTF8P38877 133 aa2.45□□□□□ -2.02
CAF120YNL278W PGD1P40356 397 aa2.45□□□□□ -2.02
CAF120YNL278W VHS2P40463 436 aa2.45□□□□□ -2.02
CAF120YNL278W YIR016WP40572 265 aa2.45□□□□□ -2.02
CAF120YNL278W MRPL22P53881 309 aa2.45□□□□□ -2.02
CAF120YNL278W ACT1P60010 375 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W NUP49Q02199 472 aa2.45□□□□□ -2.02
CAF120YNL278W YMR178WQ03219 274 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W ROT1Q03691 256 aa2.45□□□□□ -2.02
CAF120YNL278W HPT1Q04178 221 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W MCH4Q08268 501 aa2.45□□□□□ -2.02
CAF120YNL278W YPQ1Q12010 308 aa2.45□□□□□ -2.02
CAF120YNL278W SRL2Q12020 392 aa2.45□□□□□ -2.02
CAF120YNL278W YOR114WQ12219 294 aa2.45□□□□□ -2.02
CAF120YNL278W AAC1P04710 309 aa2.45□□□□□ -2.02
CAF120YNL278W CAP2P13517 287 aa2.45□□□□□ -2.02
CAF120YNL278W SEC59P20048 519 aa2.45□□□□□ -2.02
CAF120YNL278W PUT3P25502 979 aaPredicted RBP2.45□□□□□ -2.02
CAF120YNL278W DEG1P31115 442 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W OCH1P31755 480 aa2.45□□□□□ -2.02
CAF120YNL278W ACH1P32316 526 aa2.45□□□□□ -2.02
CAF120YNL278W PAU2P32612 120 aa2.45□□□□□ -2.02
CAF120YNL278W YEF1P32622 495 aa2.45□□□□□ -2.02
CAF120YNL278W AVT5P38176 459 aa2.45□□□□□ -2.02
CAF120YNL278W TIM17P39515 158 aa2.45□□□□□ -2.02
CAF120YNL278W VPS52P39904 641 aa2.45□□□□□ -2.02
CAF120YNL278W COX15P40086 486 aa2.45□□□□□ -2.02
CAF120YNL278W PAC11P40960 533 aa2.45□□□□□ -2.02
CAF120YNL278W YFL012WP43580 148 aa2.45□□□□□ -2.02
CAF120YNL278W GWT1P47026 490 aa2.45□□□□□ -2.02
CAF120YNL278W YJL016WP47072 561 aa2.45□□□□□ -2.02
CAF120YNL278W YJR011CP47086 261 aaPredicted RBP2.45□□□□□ -2.02
CAF120YNL278W NIF3P53081 288 aa2.45□□□□□ -2.02
CAF120YNL278W VPS73P53142 486 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W ATG21Q02887 496 aa2.45□□□□□ -2.02
CAF120YNL278W TY1A-DR2Q03964 440 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W YDR387CQ04162 555 aa2.45□□□□□ -2.02
CAF120YNL278W CAC2Q04199 468 aa2.45□□□□□ -2.02
CAF120YNL278W ADH6Q04894 360 aaKnown RBP2.45□□□□□ -2.02
CAF120YNL278W PRP11Q07350 266 aaPredicted RBP2.45□□□□□ -2.02
CAF120YNL278W SPO24Q3E752 67 aa2.45□□□□□ -2.02
CAF120YNL278W ALG7P07286 448 aa2.44□□□□□ -2.02
CAF120YNL278W RPB5P20434 215 aa2.44□□□□□ -2.02
CAF120YNL278W LRE1P25579 583 aaKnown RBP2.44□□□□□ -2.02
CAF120YNL278W UGX2P32772 223 aa2.44□□□□□ -2.02
CAF120YNL278W YKR073CP36153 106 aa2.44□□□□□ -2.02
CAF120YNL278W ARO9P38840 513 aaPredicted RBP2.44□□□□□ -2.02
CAF120YNL278W GPI16P38875 610 aa2.44□□□□□ -2.02
CAF120YNL278W AVT2P39981 480 aa2.44□□□□□ -2.02
CAF120YNL278W COG3P40094 801 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms