RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W CSG2P35206 410 aa2.56□□□□□ -2
VMA5YKL080W SRP14P38985 146 aa2.56□□□□□ -2
VMA5YKL080W RSM25P40496 264 aa2.56□□□□□ -2
VMA5YKL080W SYS1P41544 203 aa2.56□□□□□ -2
VMA5YKL080W YGL159WP53110 370 aa2.56□□□□□ -2
VMA5YKL080W PRM8P53174 237 aa2.56□□□□□ -2
VMA5YKL080W SWT21P53873 357 aaPredicted RBP2.56□□□□□ -2
VMA5YKL080W FMP41P53889 259 aaKnown RBP2.56□□□□□ -2
VMA5YKL080W YNL046WP53956 172 aa2.56□□□□□ -2
VMA5YKL080W INM2Q05533 292 aa2.56□□□□□ -2
VMA5YKL080W YPS3Q12303 508 aa2.56□□□□□ -2
VMA5YKL080W TUS1Q06412 1307 aa2.56□□□□□ -2
VMA5YKL080W DRS2P39524 1355 aa2.56□□□□□ -2
VMA5YKL080W CBP6P07253 162 aaPredicted RBP2.55□□□□□ -2
VMA5YKL080W ZRT3P34240 503 aa2.55□□□□□ -2
VMA5YKL080W GRE3P38715 327 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
VMA5YKL080W ECM14P38836 430 aa2.55□□□□□ -2
VMA5YKL080W YIL012WP40551 113 aa2.55□□□□□ -2
VMA5YKL080W UFE1P41834 346 aa2.55□□□□□ -2
VMA5YKL080W YNL247WP53852 767 aaKnown RBP2.55□□□□□ -2
VMA5YKL080W YDR248CQ03786 193 aa2.55□□□□□ -2
VMA5YKL080W PLP1Q04004 230 aa2.55□□□□□ -2
VMA5YKL080W MCH1Q07376 486 aa2.55□□□□□ -2
VMA5YKL080W DFM1Q12743 341 aaKnown RBP2.55□□□□□ -2
VMA5YKL080W ISD11Q6Q560 94 aa2.55□□□□□ -2
VMA5YKL080W YLR462WO13556 202 aa2.54□□□□□ -2
VMA5YKL080W COX5AP00424 153 aa2.54□□□□□ -2
VMA5YKL080W CDC28P00546 298 aaKnown RBP2.54□□□□□ -2
VMA5YKL080W IPP1P00817 287 aaKnown RBP2.54□□□□□ -2
VMA5YKL080W APS1P35181 156 aa2.54□□□□□ -2
VMA5YKL080W ECM33P38248 429 aaKnown RBP2.54□□□□□ -2
VMA5YKL080W YEL075CP39972 122 aa2.54□□□□□ -2
VMA5YKL080W RRT13P40042 185 aa2.54□□□□□ -2
VMA5YKL080W YGL034CP53186 121 aa2.54□□□□□ -2
VMA5YKL080W GTR2P53290 341 aa2.54□□□□□ -2
VMA5YKL080W YNL140CP53910 189 aa2.54□□□□□ -2
VMA5YKL080W ACT1P60010 375 aaKnown RBP2.54□□□□□ -2
VMA5YKL080W YMD8Q03697 442 aa2.54□□□□□ -2
VMA5YKL080W RRP17Q04031 235 aaPredicted RBP2.54□□□□□ -2
VMA5YKL080W YML096WQ04489 525 aa2.54□□□□□ -2
VMA5YKL080W YLR036CQ07986 203 aa2.54□□□□□ -2
VMA5YKL080W SLD7Q08457 257 aa2.54□□□□□ -2
VMA5YKL080W PST1Q12355 444 aa2.54□□□□□ -2
VMA5YKL080W YDL012CQ12489 107 aa2.54□□□□□ -2
VMA5YKL080W HTL1Q9URQ5 78 aa2.54□□□□□ -2
VMA5YKL080W SIR4P11978 1358 aa2.53□□□□□ -2
VMA5YKL080W RPL25P04456 142 aaKnown RBP2.53□□□□□ -2
VMA5YKL080W COS2P0CX12 379 aa2.53□□□□□ -2
VMA5YKL080W COS3P0CX13 379 aa2.53□□□□□ -2
VMA5YKL080W RME1P32338 300 aaKnown RBP2.53□□□□□ -2
VMA5YKL080W UBC6P33296 250 aaPredicted RBP2.53□□□□□ -2
VMA5YKL080W SMP1P38128 452 aa2.53□□□□□ -2
VMA5YKL080W ARN2P38724 620 aa2.53□□□□□ -2
VMA5YKL080W SPL2P38839 148 aa2.53□□□□□ -2
VMA5YKL080W COG3P40094 801 aa2.53□□□□□ -2
VMA5YKL080W PDS1P40316 373 aaPredicted RBP2.53□□□□□ -2
VMA5YKL080W COS4P43542 379 aa2.53□□□□□ -2
VMA5YKL080W FMP32P43557 207 aa2.53□□□□□ -2
VMA5YKL080W JAC1P53193 184 aa2.53□□□□□ -2
VMA5YKL080W YOL029CQ08187 201 aa2.53□□□□□ -2
VMA5YKL080W YPL257WQ08974 193 aa2.53□□□□□ -2
VMA5YKL080W YLR050CQ12155 161 aaKnown RBP2.53□□□□□ -2
VMA5YKL080W YAL063C-AQ3E791 96 aa2.53□□□□□ -2
VMA5YKL080W YOR020W-AQ3E824 90 aa2.53□□□□□ -2
VMA5YKL080W ADH3P07246 375 aaKnown RBP2.52□□□□□ -2.01
VMA5YKL080W ZWF1P11412 505 aaKnown RBP2.52□□□□□ -2.01
VMA5YKL080W SFC1P33303 322 aa2.52□□□□□ -2.01
VMA5YKL080W TRM7P38238 310 aaKnown RBP2.52□□□□□ -2.01
VMA5YKL080W AME1P38313 324 aa2.52□□□□□ -2.01
VMA5YKL080W COS8P38723 381 aa2.52□□□□□ -2.01
VMA5YKL080W PEX17P40155 199 aa2.52□□□□□ -2.01
VMA5YKL080W UFD1P53044 361 aa2.52□□□□□ -2.01
VMA5YKL080W TOS8P53147 276 aa2.52□□□□□ -2.01
VMA5YKL080W CAX4P53223 239 aa2.52□□□□□ -2.01
VMA5YKL080W YGR067CP53243 804 aa2.52□□□□□ -2.01
VMA5YKL080W SYF2P53277 215 aaPredicted RBP2.52□□□□□ -2.01
VMA5YKL080W YIP3P53633 176 aa2.52□□□□□ -2.01
VMA5YKL080W NRK1P53915 240 aa2.52□□□□□ -2.01
VMA5YKL080W YMR244WQ04018 355 aa2.52□□□□□ -2.01
VMA5YKL080W TSA2Q04120 196 aa2.52□□□□□ -2.01
VMA5YKL080W PEX12Q04370 399 aa2.52□□□□□ -2.01
VMA5YKL080W ECM19Q06011 112 aa2.52□□□□□ -2.01
VMA5YKL080W YLR053CQ12026 108 aa2.52□□□□□ -2.01
VMA5YKL080W ATG5Q12380 294 aa2.52□□□□□ -2.01
VMA5YKL080W EMP46Q12396 444 aa2.52□□□□□ -2.01
VMA5YKL080W AGC1Q12482 902 aa2.52□□□□□ -2.01
VMA5YKL080W NOT5Q12514 560 aaPredicted RBP2.52□□□□□ -2.01
VMA5YKL080W MAG1P22134 296 aaKnown RBP2.51□□□□□ -2.01
VMA5YKL080W DBF2P22204 572 aa2.51□□□□□ -2.01
VMA5YKL080W TAH1P25638 111 aaPredicted RBP2.51□□□□□ -2.01
VMA5YKL080W RNP1P32385 249 aa2.51□□□□□ -2.01
VMA5YKL080W SRY1P36007 326 aa2.51□□□□□ -2.01
VMA5YKL080W MRPL27P36526 146 aaPredicted RBP2.51□□□□□ -2.01
VMA5YKL080W LSM7P53905 115 aaKnown RBP2.51□□□□□ -2.01
VMA5YKL080W YLR460CP54007 376 aa2.51□□□□□ -2.01
VMA5YKL080W MRPS16Q02608 121 aa2.51□□□□□ -2.01
VMA5YKL080W SNO1Q03144 224 aa2.51□□□□□ -2.01
VMA5YKL080W NOC4Q06512 552 aaPredicted RBP2.51□□□□□ -2.01
VMA5YKL080W YLR030WQ07967 263 aa2.51□□□□□ -2.01
VMA5YKL080W YOR376WQ08900 122 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms