RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C SEC17P32602 292 aa2.83□□□□□ -1.96
RPN1YHR027C UGX2P32772 223 aa2.83□□□□□ -1.96
RPN1YHR027C FMT1P32785 401 aa2.83□□□□□ -1.96
RPN1YHR027C MTR2P34232 184 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C SPT23P35210 1082 aa2.83□□□□□ -1.96
RPN1YHR027C SHE1P38200 338 aa2.83□□□□□ -1.96
RPN1YHR027C TRS20P38334 175 aa2.83□□□□□ -1.96
RPN1YHR027C SSN3P39073 555 aa2.83□□□□□ -1.96
RPN1YHR027C NIT1P40447 199 aa2.83□□□□□ -1.96
RPN1YHR027C YIL012WP40551 113 aa2.83□□□□□ -1.96
RPN1YHR027C SMD3P43321 101 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C TAM41P53230 385 aa2.83□□□□□ -1.96
RPN1YHR027C NSG2P53898 299 aa2.83□□□□□ -1.96
RPN1YHR027C RCE1Q03530 315 aa2.83□□□□□ -1.96
RPN1YHR027C YPL260WQ08977 551 aa2.83□□□□□ -1.96
RPN1YHR027C TGL5Q12043 749 aa2.83□□□□□ -1.96
RPN1YHR027C YDL157CQ12082 118 aa2.83□□□□□ -1.96
RPN1YHR027C SWM1Q12379 170 aa2.83□□□□□ -1.96
RPN1YHR027C PAR32Q12515 295 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C LAA1P39526 2014 aa2.83□□□□□ -1.96
RPN1YHR027C PAI3P01094 68 aa2.83□□□□□ -1.96
RPN1YHR027C NOP1P15646 327 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C MSN1P22148 382 aa2.83□□□□□ -1.96
RPN1YHR027C TIP1P27654 210 aaPredicted RBP2.83□□□□□ -1.96
RPN1YHR027C AIM26P32858 118 aa2.83□□□□□ -1.96
RPN1YHR027C MTH1P35198 433 aa2.83□□□□□ -1.96
RPN1YHR027C PAC2P39937 518 aa2.83□□□□□ -1.96
RPN1YHR027C YEA6P39953 335 aa2.83□□□□□ -1.96
RPN1YHR027C PRM5P40476 318 aa2.83□□□□□ -1.96
RPN1YHR027C YCH1P42937 148 aa2.83□□□□□ -1.96
RPN1YHR027C PAU5P43575 122 aa2.83□□□□□ -1.96
RPN1YHR027C ULI1P43604 169 aa2.83□□□□□ -1.96
RPN1YHR027C MIC26P50087 233 aa2.83□□□□□ -1.96
RPN1YHR027C SBH2P52871 88 aa2.83□□□□□ -1.96
RPN1YHR027C RMD9P53140 646 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C YAP1802P53309 568 aa2.83□□□□□ -1.96
RPN1YHR027C IBD2P53892 351 aa2.83□□□□□ -1.96
RPN1YHR027C CAB5Q03941 241 aa2.83□□□□□ -1.96
RPN1YHR027C HLR1Q04429 423 aa2.83□□□□□ -1.96
RPN1YHR027C NRT1Q08485 598 aa2.83□□□□□ -1.96
RPN1YHR027C YOR385WQ08909 290 aa2.83□□□□□ -1.96
RPN1YHR027C UBX3Q12229 455 aa2.83□□□□□ -1.96
RPN1YHR027C TPT1Q12272 230 aaKnown RBP2.83□□□□□ -1.96
RPN1YHR027C FRE7Q12333 620 aa2.83□□□□□ -1.96
RPN1YHR027C QCR7P00128 127 aa2.82□□□□□ -1.96
RPN1YHR027C TPI1P00942 248 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C ATS1P31386 333 aa2.82□□□□□ -1.96
RPN1YHR027C EMP70P32802 667 aa2.82□□□□□ -1.96
RPN1YHR027C YKL187CP34231 750 aa2.82□□□□□ -1.96
RPN1YHR027C UPS2P35200 230 aa2.82□□□□□ -1.96
RPN1YHR027C EAF5P39995 279 aa2.82□□□□□ -1.96
RPN1YHR027C NSA2P40078 261 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C YIL089WP40500 205 aa2.82□□□□□ -1.96
RPN1YHR027C PHS1P40857 217 aa2.82□□□□□ -1.96
RPN1YHR027C RRT5P43607 289 aa2.82□□□□□ -1.96
RPN1YHR027C TYW3P53177 273 aa2.82□□□□□ -1.96
RPN1YHR027C YNL260CP53846 198 aa2.82□□□□□ -1.96
RPN1YHR027C RNH201P53942 307 aa2.82□□□□□ -1.96
RPN1YHR027C UTP15Q04305 513 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C HRI1Q05905 244 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C YLR346CQ06139 101 aa2.82□□□□□ -1.96
RPN1YHR027C SUE1Q06524 206 aa2.82□□□□□ -1.96
RPN1YHR027C POS5Q06892 414 aa2.82□□□□□ -1.96
RPN1YHR027C ISD11Q6Q560 94 aa2.82□□□□□ -1.96
RPN1YHR027C HTA1P04911 132 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C CBS1P14066 229 aa2.82□□□□□ -1.96
RPN1YHR027C YCR023CP25351 611 aa2.82□□□□□ -1.96
RPN1YHR027C LSM2P38203 95 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C SAF1P38352 637 aa2.82□□□□□ -1.96
RPN1YHR027C FIS1P40515 155 aa2.82□□□□□ -1.96
RPN1YHR027C TMA23Q03525 211 aa2.82□□□□□ -1.96
RPN1YHR027C MTQ2Q03920 221 aaPredicted RBP2.82□□□□□ -1.96
RPN1YHR027C ECM22Q05958 814 aaPredicted RBP2.82□□□□□ -1.96
RPN1YHR027C YLR456WQ06199 204 aa2.82□□□□□ -1.96
RPN1YHR027C YDL177CQ12257 170 aa2.82□□□□□ -1.96
RPN1YHR027C LAS17Q12446 633 aa2.82□□□□□ -1.96
RPN1YHR027C OCH1P31755 480 aa2.82□□□□□ -1.96
RPN1YHR027C YHL041WP38730 149 aa2.82□□□□□ -1.96
RPN1YHR027C IRC22P40006 225 aa2.82□□□□□ -1.96
RPN1YHR027C RPL13BP40212 199 aaKnown RBP2.82□□□□□ -1.96
RPN1YHR027C UBP8P50102 471 aa2.82□□□□□ -1.96
RPN1YHR027C LYS5P50113 272 aa2.82□□□□□ -1.96
RPN1YHR027C NPY1P53164 384 aa2.82□□□□□ -1.96
RPN1YHR027C VHT1P53241 593 aa2.82□□□□□ -1.96
RPN1YHR027C YGR283CP53336 341 aaPredicted RBP2.82□□□□□ -1.96
RPN1YHR027C YNL092WP53934 400 aa2.82□□□□□ -1.96
RPN1YHR027C LOA1Q06508 300 aa2.82□□□□□ -1.96
RPN1YHR027C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
RPN1YHR027C ISU2Q12056 156 aa2.82□□□□□ -1.96
RPN1YHR027C PER33Q12144 273 aa2.82□□□□□ -1.96
RPN1YHR027C RAX2Q12465 1220 aa2.82□□□□□ -1.96
RPN1YHR027C ALK2P32789 676 aaPredicted RBP2.81□□□□□ -1.96
RPN1YHR027C SLC1P33333 303 aa2.81□□□□□ -1.96
RPN1YHR027C MOH1P38191 138 aa2.81□□□□□ -1.96
RPN1YHR027C CTF8P38877 133 aa2.81□□□□□ -1.96
RPN1YHR027C SHO1P40073 367 aa2.81□□□□□ -1.96
RPN1YHR027C YGL262WP53054 175 aa2.81□□□□□ -1.96
RPN1YHR027C COX18P53239 316 aa2.81□□□□□ -1.96
RPN1YHR027C RCR2Q03446 210 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C ASM4Q05166 528 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms