RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG1	YGL180W	RIB3	Q99258	208 aa		4.27	□□□□□ -1.73
ATG1	YGL180W	SWI1	P09547	1314 aa		4.27	□□□□□ -1.73
ATG1	YGL180W	CDC43	P18898	376 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	SLM6	P38343	150 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	ARN2	P38724	620 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	ATG18	P43601	500 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	YPL113C	Q02961	396 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	TRM10	Q12400	293 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	RPO41	P13433	1351 aa	Known RBP	4.26	□□□□□ -1.73
ATG1	YGL180W	GCN3	P14741	305 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	TIM8	P57744	87 aa		4.26	□□□□□ -1.73
ATG1	YGL180W	EFG1	Q3E705	233 aa	Known RBP	4.26	□□□□□ -1.73
ATG1	YGL180W	CSG2	P35206	410 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	NAT2	P37293	288 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	SEN34	P39707	275 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	RHO3	Q00245	231 aa	Known RBP	4.25	□□□□□ -1.73
ATG1	YGL180W	YOL024W	Q08172	172 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	YPL245W	Q12179	454 aa	Known RBP	4.25	□□□□□ -1.73
ATG1	YGL180W	YER078W-A	Q3E7A2	54 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	Q0144	Q9ZZW2	109 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	RRG9	P40156	214 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	BXI1	P48558	297 aa		4.25	□□□□□ -1.73
ATG1	YGL180W	YOR289W	Q12012	251 aa	Predicted RBP	4.25	□□□□□ -1.73
ATG1	YGL180W	COX5A	P00424	153 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	HIS3	P06633	220 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	TVP38	P36164	337 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	TRM7	P38238	310 aa	Known RBP	4.24	□□□□□ -1.73
ATG1	YGL180W	RRP3	P38712	501 aa	Known RBP	4.24	□□□□□ -1.73
ATG1	YGL180W	PRM5	P40476	318 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	HPM1	P40481	377 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	YJL213W	P40896	331 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	YFH7	P43591	353 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	YGR015C	P53208	328 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	WSC2	P53832	503 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	AAH1	P53909	347 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	IMP4	P53941	290 aa	Known RBP	4.24	□□□□□ -1.73
ATG1	YGL180W	LIP2	Q06005	328 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	DTD1	Q07648	150 aa	Known RBP	4.24	□□□□□ -1.73
ATG1	YGL180W	DAS2	Q12084	232 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	EAF3	Q12432	401 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	ZWF1	P11412	505 aa	Known RBP	4.24	□□□□□ -1.73
ATG1	YGL180W	RPB5	P20434	215 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	MRP21	P38175	177 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	YMR320W	Q04897	101 aa		4.24	□□□□□ -1.73
ATG1	YGL180W	MSI1	P13712	422 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	POP8	P38208	133 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	PRS3	P38689	320 aa	Known RBP	4.23	□□□□□ -1.73
ATG1	YGL180W	LSM12	P38828	187 aa	Known RBP	4.23	□□□□□ -1.73
ATG1	YGL180W	GTR2	P53290	341 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	MPA43	P53583	542 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG1	YGL180W	TRM12	Q04235	462 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	HSP30	P25619	332 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	TAH1	P25638	111 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG1	YGL180W	BAT1	P38891	393 aa	Known RBP	4.23	□□□□□ -1.73
ATG1	YGL180W	XBP1	P40489	647 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	GLC8	P41818	229 aa		4.23	□□□□□ -1.73
ATG1	YGL180W	HST4	P53688	370 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	YMD8	Q03697	442 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	SYC1	Q08553	188 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG1	YGL180W	SNT2	P53127	1403 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	RPS28B	P0C0X0	67 aa	Known RBP	4.22	□□□□□ -1.73
ATG1	YGL180W	TRS65	P32893	560 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	CSE2	P33308	149 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	CPR5	P35176	225 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	RPA43	P46669	326 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	PGU1	P47180	361 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	YGR050C	P53231	118 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	NRM1	P53718	249 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	YDR476C	Q03362	224 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	YPL225W	Q08971	146 aa	Known RBP	4.22	□□□□□ -1.73
ATG1	YGL180W	YLR046C	Q12253	270 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG1	YGL180W	YKL068W-A	Q3E826	78 aa		4.22	□□□□□ -1.73
ATG1	YGL180W	KIN28	P06242	306 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	BGL2	P15703	313 aa	Known RBP	4.21	□□□□□ -1.73
ATG1	YGL180W	RMD6	P39975	231 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	AVT1	P47082	602 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	COQ5	P49017	307 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	YGL082W	P53155	381 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	COS6	P53344	381 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	LSM7	P53905	115 aa	Known RBP	4.21	□□□□□ -1.73
ATG1	YGL180W	CSN9	Q03981	162 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	DYN3	Q04949	312 aa		4.21	□□□□□ -1.73
ATG1	YGL180W	PSK1	P31374	1356 aa		4.21	□□□□□ -1.74
ATG1	YGL180W	MHP1	P43638	1398 aa		4.21	□□□□□ -1.74
ATG1	YGL180W	YGL039W	P53183	348 aa	Known RBP	4.21	□□□□□ -1.74
ATG1	YGL180W	BBP1	Q12365	385 aa		4.21	□□□□□ -1.74
ATG1	YGL180W	ILV6	P25605	309 aa	Known RBP	4.2	□□□□□ -1.74
ATG1	YGL180W	SFK1	P35735	353 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	MRPL17	P36528	281 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	IPI1	P38803	334 aa	Predicted RBP	4.2	□□□□□ -1.74
ATG1	YGL180W	UBP5	P39944	805 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	IRC22	P40006	225 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	FAR7	P43592	221 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	ERV29	P53337	310 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	ERV2	Q12284	196 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	CNB1	P25296	175 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	APS1	P35181	156 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	DID2	P69771	204 aa		4.2	□□□□□ -1.74
ATG1	YGL180W	SWP1	Q02795	286 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms