RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC20	YDR498C	NSA1	P53136	463 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC20	YDR498C	GTF1	P53260	183 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC20	YDR498C	SLI1	P53304	468 aa		4.97	□□□□□ -1.61
SEC20	YDR498C	ALG9	P53868	555 aa	Known RBP	4.97	□□□□□ -1.61
SEC20	YDR498C	RTR2	Q12378	196 aa		4.97	□□□□□ -1.61
SEC20	YDR498C	ERP4	Q12450	207 aa		4.97	□□□□□ -1.61
SEC20	YDR498C	PET20	Q99373	253 aa		4.97	□□□□□ -1.61
SEC20	YDR498C	TPI1	P00942	248 aa	Known RBP	4.96	□□□□□ -1.62
SEC20	YDR498C	CDC36	P06100	191 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC20	YDR498C	YLL053C	P0CD98	152 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	KAE1	P36132	386 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	POP8	P38208	133 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	YEL057C	P39983	233 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	PHB1	P40961	287 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	YHC3	P47040	408 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	JAC1	P53193	184 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	TNA1	P53322	534 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	EST3	Q03096	181 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	PRM15	Q03262	622 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	TRM13	Q12383	476 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	TFC7	Q12415	435 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	WHI5	Q12416	295 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	ATG31	Q12421	196 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	YJR112W-A	Q3E743	109 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	Q0144	Q9ZZW2	109 aa		4.96	□□□□□ -1.62
SEC20	YDR498C	CBP6	P07253	162 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	SEN2	P16658	377 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	TIP1	P27654	210 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	PEX4	P29340	183 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	YKL063C	P35725	167 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	ARO9	P38840	513 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	LSM1	P47017	172 aa	Known RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	ECM27	P47144	725 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	UFD1	P53044	361 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	HOL1	P53389	586 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	SMX3	P54999	86 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	HNT1	Q04344	158 aa	Known RBP	4.95	□□□□□ -1.62
SEC20	YDR498C	API2	Q04413	109 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	YDL086W	Q07505	273 aa		4.95	□□□□□ -1.62
SEC20	YDR498C	CDC28	P00546	298 aa	Known RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	ERS1	P17261	260 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	SPO7	P18410	259 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	MIR1	P23641	311 aa	Known RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	MRP20	P32387	263 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SEC20	YDR498C	PTI1	P39927	425 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	OST1	P41543	476 aa	Known RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	MOB2	P43563	287 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	HSV2	P50079	448 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	AVT4	P50944	713 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	NRK1	P53915	240 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	RSM23	Q01163	450 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	YML018C	Q03730	393 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	YDR248C	Q03786	193 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	YAP6	Q03935	383 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	HRI1	Q05905	244 aa	Known RBP	4.94	□□□□□ -1.62
SEC20	YDR498C	ANT1	Q06497	328 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	SRL2	Q12020	392 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	AEP3	Q12089	606 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	EAF3	Q12432	401 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	RRI1	Q12468	440 aa		4.94	□□□□□ -1.62
SEC20	YDR498C	RPL30	P14120	105 aa	Known RBP	4.93	□□□□□ -1.62
SEC20	YDR498C	IFM1	P25038	676 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	OCH1	P31755	480 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	YBL010C	P32788	280 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	YPC1	P38298	316 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	RPS26A	P39938	119 aa	Known RBP	4.93	□□□□□ -1.62
SEC20	YDR498C	RPS26B	P39939	119 aa	Known RBP	4.93	□□□□□ -1.62
SEC20	YDR498C	UBC12	P52491	188 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	DID2	P69771	204 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	TIM11	P81449	96 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC20	YDR498C	THI74	Q04083	370 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	YDR387C	Q04162	555 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	YOL118C	Q08259	102 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	TGS1	Q12052	315 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SEC20	YDR498C	YDL180W	Q12301	547 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	MPD1	Q12404	318 aa	Known RBP	4.93	□□□□□ -1.62
SEC20	YDR498C	IZH2	Q12442	317 aa		4.93	□□□□□ -1.62
SEC20	YDR498C	REP2	P03872	296 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	GCD1	P09032	578 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	CDC34	P14682	295 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	ARO3	P14843	370 aa	Known RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	SAG1	P20840	650 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	DBP2	P24783	546 aa	Known RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	DEG1	P31115	442 aa	Known RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	ERG3	P32353	365 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	COQ2	P32378	372 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	REC114	P32841	428 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	SWD2	P36104	329 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	MRPL39	P36533	70 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	FAT1	P38225	669 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	YER084W	P40057	128 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	IDP2	P41939	412 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	YJL016W	P47072	561 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	YNR048W	P53740	393 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	SPR28	Q04921	423 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	RTT103	Q05543	409 aa		4.92	□□□□□ -1.62
SEC20	YDR498C	MRX9	Q07349	420 aa	Known RBP	4.92	□□□□□ -1.62
SEC20	YDR498C	RRT7	Q07829	113 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms