RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YCR016WP25617 290 aaKnown RBP2.87□□□□□ -1.95
CDC40YDR364C OAC1P32332 324 aa2.87□□□□□ -1.95
CDC40YDR364C YEF1P32622 495 aa2.87□□□□□ -1.95
CDC40YDR364C VAM7P32912 316 aa2.87□□□□□ -1.95
CDC40YDR364C ARN2P38724 620 aa2.87□□□□□ -1.95
CDC40YDR364C YHK8P38776 514 aa2.87□□□□□ -1.95
CDC40YDR364C MDM31P38880 579 aa2.87□□□□□ -1.95
CDC40YDR364C SIM1P40472 476 aa2.87□□□□□ -1.95
CDC40YDR364C ICE2P40499 491 aa2.87□□□□□ -1.95
CDC40YDR364C TIM21P53220 239 aa2.87□□□□□ -1.95
CDC40YDR364C LST7P53237 242 aa2.87□□□□□ -1.95
CDC40YDR364C YGR067CP53243 804 aa2.87□□□□□ -1.95
CDC40YDR364C PXR1P53335 271 aaPredicted RBP2.87□□□□□ -1.95
CDC40YDR364C NRM1P53718 249 aa2.87□□□□□ -1.95
CDC40YDR364C DML1Q03652 475 aa2.87□□□□□ -1.95
CDC40YDR364C INP1Q03694 420 aa2.87□□□□□ -1.95
CDC40YDR364C ELP6Q04868 273 aa2.87□□□□□ -1.95
CDC40YDR364C FMP42Q04991 504 aa2.87□□□□□ -1.95
CDC40YDR364C RTT103Q05543 409 aa2.87□□□□□ -1.95
CDC40YDR364C SPC3Q12133 184 aa2.87□□□□□ -1.95
CDC40YDR364C IES3Q12345 250 aa2.87□□□□□ -1.95
CDC40YDR364C PSF1Q12488 208 aa2.87□□□□□ -1.95
CDC40YDR364C TDH3P00359 332 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
CDC40YDR364C ARG80P07249 177 aa2.86□□□□□ -1.95
CDC40YDR364C MET2P08465 486 aa2.86□□□□□ -1.95
CDC40YDR364C YOL162WP0CF19 215 aa2.86□□□□□ -1.95
CDC40YDR364C RPL20AP0CX23 172 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C RPL20BP0CX24 172 aaPredicted RBP2.86□□□□□ -1.95
CDC40YDR364C CAP2P13517 287 aa2.86□□□□□ -1.95
CDC40YDR364C ERD2P18414 219 aa2.86□□□□□ -1.95
CDC40YDR364C EXG1P23776 448 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C RPL24BP24000 155 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C PBN1P25580 416 aa2.86□□□□□ -1.95
CDC40YDR364C ARO4P32449 370 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C NDC1P32500 655 aa2.86□□□□□ -1.95
CDC40YDR364C TOA2P32774 122 aa2.86□□□□□ -1.95
CDC40YDR364C TRS65P32893 560 aa2.86□□□□□ -1.95
CDC40YDR364C PEX32P38292 413 aa2.86□□□□□ -1.95
CDC40YDR364C MST28P39552 234 aa2.86□□□□□ -1.95
CDC40YDR364C YER085CP40058 173 aa2.86□□□□□ -1.95
CDC40YDR364C FMC1P40491 155 aa2.86□□□□□ -1.95
CDC40YDR364C SFH5P47008 294 aa2.86□□□□□ -1.95
CDC40YDR364C COX16P47081 118 aa2.86□□□□□ -1.95
CDC40YDR364C SEH1P53011 349 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C LSG1P53145 640 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C RRN9P53437 365 aa2.86□□□□□ -1.95
CDC40YDR364C GIM3P53900 129 aa2.86□□□□□ -1.95
CDC40YDR364C YPL080CQ02826 108 aa2.86□□□□□ -1.95
CDC40YDR364C MAK3Q03503 176 aa2.86□□□□□ -1.95
CDC40YDR364C RRP17Q04031 235 aaPredicted RBP2.86□□□□□ -1.95
CDC40YDR364C BRX1Q08235 291 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C MSH5Q12175 901 aa2.86□□□□□ -1.95
CDC40YDR364C DET1Q99288 334 aaKnown RBP2.86□□□□□ -1.95
CDC40YDR364C DPM1P14020 267 aaKnown RBP2.85□□□□□ -1.95
CDC40YDR364C PMT2P31382 759 aa2.85□□□□□ -1.95
CDC40YDR364C ARO7P32178 256 aa2.85□□□□□ -1.95
CDC40YDR364C KRE6P32486 720 aa2.85□□□□□ -1.95
CDC40YDR364C ZRT1P32804 376 aa2.85□□□□□ -1.95
CDC40YDR364C TIR2P33890 251 aa2.85□□□□□ -1.95
CDC40YDR364C UTP11P34247 250 aaPredicted RBP2.85□□□□□ -1.95
CDC40YDR364C JEN1P36035 616 aa2.85□□□□□ -1.95
CDC40YDR364C SWD2P36104 329 aaPredicted RBP2.85□□□□□ -1.95
CDC40YDR364C GPX2P38143 162 aa2.85□□□□□ -1.95
CDC40YDR364C RIB5P38145 238 aa2.85□□□□□ -1.95
CDC40YDR364C CHK1P38147 527 aa2.85□□□□□ -1.95
CDC40YDR364C MTC6P38849 526 aa2.85□□□□□ -1.95
CDC40YDR364C CHL4P38907 458 aa2.85□□□□□ -1.95
CDC40YDR364C DDI1P40087 428 aa2.85□□□□□ -1.95
CDC40YDR364C JLP2P40206 208 aa2.85□□□□□ -1.95
CDC40YDR364C KEG1P43614 200 aa2.85□□□□□ -1.95
CDC40YDR364C IKS1P47042 667 aa2.85□□□□□ -1.95
CDC40YDR364C COS10P52924 374 aa2.85□□□□□ -1.95
CDC40YDR364C YLR460CP54007 376 aa2.85□□□□□ -1.95
CDC40YDR364C HXT11P54862 567 aa2.85□□□□□ -1.95
CDC40YDR364C NCE101Q02820 53 aa2.85□□□□□ -1.95
CDC40YDR364C SEC13Q04491 297 aaKnown RBP2.85□□□□□ -1.95
CDC40YDR364C GAL83Q04739 417 aa2.85□□□□□ -1.95
CDC40YDR364C YMR317WQ04893 1140 aa2.85□□□□□ -1.95
CDC40YDR364C YDL114WQ07530 308 aa2.85□□□□□ -1.95
CDC40YDR364C GAT3Q07928 141 aa2.85□□□□□ -1.95
CDC40YDR364C PCL9Q12477 304 aa2.85□□□□□ -1.95
CDC40YDR364C CSF1Q12150 2958 aa2.84□□□□□ -1.95
CDC40YDR364C KIN28P06242 306 aa2.84□□□□□ -1.96
CDC40YDR364C YGL041W-AP0C5N3 154 aa2.84□□□□□ -1.96
CDC40YDR364C MRP1P10662 321 aaKnown RBP2.84□□□□□ -1.96
CDC40YDR364C YPK2P18961 677 aa2.84□□□□□ -1.96
CDC40YDR364C PUT3P25502 979 aaPredicted RBP2.84□□□□□ -1.96
CDC40YDR364C STP22P25604 385 aa2.84□□□□□ -1.96
CDC40YDR364C HSP30P25619 332 aa2.84□□□□□ -1.96
CDC40YDR364C YCR022CP25620 114 aa2.84□□□□□ -1.96
CDC40YDR364C ACB1P31787 87 aa2.84□□□□□ -1.96
CDC40YDR364C TIM12P32830 109 aa2.84□□□□□ -1.96
CDC40YDR364C COS9P36034 407 aa2.84□□□□□ -1.96
CDC40YDR364C DTR1P38125 572 aa2.84□□□□□ -1.96
CDC40YDR364C FMP23P38231 175 aa2.84□□□□□ -1.96
CDC40YDR364C NSG1P38837 291 aa2.84□□□□□ -1.96
CDC40YDR364C NVJ1P38881 321 aa2.84□□□□□ -1.96
CDC40YDR364C PCL6P40038 420 aa2.84□□□□□ -1.96
CDC40YDR364C YIL067CP40514 678 aa2.84□□□□□ -1.96
CDC40YDR364C YGL101WP53144 215 aa2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms