RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SSN8	P47821	323 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	DIE2	P50076	525 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	UFD1	P53044	361 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	GPG1	P53130	126 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	YNL092W	P53934	400 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
SKP1	YDR328C	YPR098C	Q06089	161 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	RNH203	Q12338	110 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	RAD52	P06778	471 aa	Known RBP	6.22	□□□□□ -1.41
SKP1	YDR328C	GCD1	P09032	578 aa	Predicted RBP	6.22	□□□□□ -1.41
SKP1	YDR328C	SPS4	P09937	338 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	FMT1	P32785	401 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	YBL010C	P32788	280 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	YBR220C	P38318	560 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	YER079W	P40052	210 aa	Known RBP	6.22	□□□□□ -1.41
SKP1	YDR328C	YIL029C	P40538	142 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	GNA1	P43577	159 aa	Predicted RBP	6.22	□□□□□ -1.41
SKP1	YDR328C	LSM1	P47017	172 aa	Known RBP	6.22	□□□□□ -1.41
SKP1	YDR328C	UBC13	P52490	153 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	RSM27	P53305	110 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	YDC1	Q02896	317 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	GAT3	Q07928	141 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	WTM2	Q12206	467 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	RDI1	Q12434	202 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	ERP4	Q12450	207 aa		6.22	□□□□□ -1.41
SKP1	YDR328C	URA3	P03962	267 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	RPL6B	P05739	176 aa	Known RBP	6.21	□□□□□ -1.42
SKP1	YDR328C	CPR4	P25334	318 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	BOL3	P39724	118 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	SIT1	P39980	628 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	GIM3	P53900	129 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	PIN3	Q06449	215 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	YOR186W	Q08560	144 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	PET20	Q99373	253 aa		6.21	□□□□□ -1.42
SKP1	YDR328C	YOX1	P34161	385 aa		6.2	□□□□□ -1.42
SKP1	YDR328C	GTF1	P53260	183 aa	Predicted RBP	6.2	□□□□□ -1.42
SKP1	YDR328C	CRZ1	P53968	678 aa		6.2	□□□□□ -1.42
SKP1	YDR328C	SMX3	P54999	86 aa	Predicted RBP	6.2	□□□□□ -1.42
SKP1	YDR328C	SYM1	Q06563	197 aa		6.2	□□□□□ -1.42
SKP1	YDR328C	RPL25	P04456	142 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	RPL43A	P0CX25	92 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	RPL43B	P0CX26	92 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	GRX2	P17695	143 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	YCR101C	P25607	182 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	YCR016W	P25617	290 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	TRR1	P29509	319 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	MTR2	P34232	184 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	LNP1	P38878	278 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	CCS1	P40202	249 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	TAF4	P50105	388 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	DMA2	P53924	522 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	ARG5,6	Q01217	863 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	SKO1	Q02100	647 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	YMR279C	Q03263	540 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	NGL2	Q03264	515 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	YDR248C	Q03786	193 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	VBA1	Q04301	562 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	MPD1	Q12404	318 aa	Known RBP	6.19	□□□□□ -1.42
SKP1	YDR328C	EAF3	Q12432	401 aa		6.19	□□□□□ -1.42
SKP1	YDR328C	REP2	P03872	296 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	GAL1	P04385	528 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	PUT1	P09368	476 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	RPS23A	P0CX29	145 aa	Known RBP	6.18	□□□□□ -1.42
SKP1	YDR328C	RPS23B	P0CX30	145 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	SPS100	P13130	326 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	SAR1	P20606	190 aa	Known RBP	6.18	□□□□□ -1.42
SKP1	YDR328C	DAL80	P26343	269 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	IMP1	P28627	190 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	ERG3	P32353	365 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	NAT2	P37293	288 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	YBR197C	P38306	217 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	PRS3	P38689	320 aa	Known RBP	6.18	□□□□□ -1.42
SKP1	YDR328C	MRX5	P47007	382 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	YML018C	Q03730	393 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	YMR254C	Q04838	102 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	YTH1	Q06102	208 aa	Predicted RBP	6.18	□□□□□ -1.42
SKP1	YDR328C	GRC3	Q07845	632 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	YLR125W	Q12138	136 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	TRM13	Q12383	476 aa		6.18	□□□□□ -1.42
SKP1	YDR328C	ARG80	P07249	177 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	YLL053C	P0CD98	152 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	STF2	P16965	84 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	DIT1	P21623	536 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	MIR1	P23641	311 aa	Known RBP	6.17	□□□□□ -1.42
SKP1	YDR328C	MRP17	P28778	131 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	OCH1	P31755	480 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	PAN3	P36102	679 aa	Predicted RBP	6.17	□□□□□ -1.42
SKP1	YDR328C	UTP30	P36144	274 aa	Known RBP	6.17	□□□□□ -1.42
SKP1	YDR328C	FIG1	P38224	298 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	PRS2	P38620	318 aa	Known RBP	6.17	□□□□□ -1.42
SKP1	YDR328C	YJR011C	P47086	261 aa	Predicted RBP	6.17	□□□□□ -1.42
SKP1	YDR328C	OKP1	P53298	406 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	SED1	Q01589	338 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	NRG1	Q03125	231 aa		6.17	□□□□□ -1.42
SKP1	YDR328C	PET122	P10355	254 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	VMA3	P25515	160 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	YKL107W	P34251	309 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	SHM2	P37291	469 aa	Known RBP	6.16	□□□□□ -1.42
SKP1	YDR328C	EDS1	P38073	919 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	SWD3	P38123	315 aa		6.16	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms