RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAN1	YDR143C	CDC28	P00546	298 aa	Known RBP	7.21	□□□□□ -1.26
SAN1	YDR143C	PUT1	P09368	476 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	CPR4	P25334	318 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	MCH2	P36032	473 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	ARO9	P38840	513 aa	Predicted RBP	7.21	□□□□□ -1.26
SAN1	YDR143C	FLX1	P40464	311 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	MID1	P41821	548 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	GNA1	P43577	159 aa	Predicted RBP	7.21	□□□□□ -1.26
SAN1	YDR143C	RPN14	P53196	417 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	YPL077C	Q02831	240 aa		7.21	□□□□□ -1.26
SAN1	YDR143C	RPS31	P05759	152 aa	Known RBP	7.2	□□□□□ -1.26
SAN1	YDR143C	MSI1	P13712	422 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	MRPL36	P36531	177 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	GEP4	P38812	185 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	VMA7	P39111	118 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	YJR011C	P47086	261 aa	Predicted RBP	7.2	□□□□□ -1.26
SAN1	YDR143C	ALG9	P53868	555 aa	Known RBP	7.2	□□□□□ -1.26
SAN1	YDR143C	SPR28	Q04921	423 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	FIT3	Q08907	204 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	RTR2	Q12378	196 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	TFB5	Q3E7C1	72 aa	Predicted RBP	7.2	□□□□□ -1.26
SAN1	YDR143C	HEM4	P06174	275 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	YCR061W	P25639	631 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	SUA5	P32579	426 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	FLO10	P36170	1169 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	COS8	P38723	381 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
SAN1	YDR143C	OST1	P41543	476 aa	Known RBP	7.2	□□□□□ -1.26
SAN1	YDR143C	SKP1	P52286	194 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	YDL218W	Q07629	317 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	RFU1	Q08003	200 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	RNH203	Q12338	110 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	YJR112W-A	Q3E743	109 aa		7.2	□□□□□ -1.26
SAN1	YDR143C	YBR056W-A	I2HB52	66 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	MAG1	P22134	296 aa	Known RBP	7.19	□□□□□ -1.26
SAN1	YDR143C	RTG1	P32607	177 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	REC114	P32841	428 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	YMR262W	P38430	313 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	AIM46	P38885	310 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	GWT1	P47026	490 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	SSN8	P47821	323 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	SUR7	P54003	302 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	CAB5	Q03941	241 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	EAF3	Q12432	401 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	PRM4	Q12498	284 aa		7.19	□□□□□ -1.26
SAN1	YDR143C	TPI1	P00942	248 aa	Known RBP	7.18	□□□□□ -1.26
SAN1	YDR143C	RPL35A	P0CX84	120 aa	Known RBP	7.18	□□□□□ -1.26
SAN1	YDR143C	RPL35B	P0CX85	120 aa	Known RBP	7.18	□□□□□ -1.26
SAN1	YDR143C	SAG1	P20840	650 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	IFM1	P25038	676 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	TIP1	P27654	210 aa	Predicted RBP	7.18	□□□□□ -1.26
SAN1	YDR143C	MRP20	P32387	263 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	YER079W	P40052	210 aa	Known RBP	7.18	□□□□□ -1.26
SAN1	YDR143C	XBP1	P40489	647 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	PRM15	Q03262	622 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	YOR186W	Q08560	144 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	SCP1	Q08873	200 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	UBA3	Q99344	299 aa		7.18	□□□□□ -1.26
SAN1	YDR143C	RPL25	P04456	142 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	SEN2	P16658	377 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	ARC40	P38328	384 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	SNX4	P47057	423 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	YJR111C	P47148	283 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	NIF3	P53081	288 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	YDR391C	Q04170	232 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	DLT1	Q04216	342 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	RTT103	Q05543	409 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	ATG31	Q12421	196 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	SEC22	P22214	214 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	CDC39	P25655	2108 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	PEX4	P29340	183 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	GLC7	P32598	312 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	YBR197C	P38306	217 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	TAD2	P47058	250 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	SIP18	P50263	79 aa		7.17	□□□□□ -1.26
SAN1	YDR143C	SMX3	P54999	86 aa	Predicted RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	SRP1	Q02821	542 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	RRS1	Q08746	203 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	PRS5	Q12265	496 aa	Known RBP	7.17	□□□□□ -1.26
SAN1	YDR143C	OCH1	P31755	480 aa		7.16	□□□□□ -1.26
SAN1	YDR143C	YIR035C	P40579	254 aa		7.16	□□□□□ -1.26
SAN1	YDR143C	MED4	Q12343	284 aa		7.16	□□□□□ -1.26
SAN1	YDR143C	TFC7	Q12415	435 aa		7.16	□□□□□ -1.26
SAN1	YDR143C	MAK32	P23060	363 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	TRR1	P29509	319 aa	Known RBP	7.15	□□□□□ -1.26
SAN1	YDR143C	CLB6	P32943	380 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	SRY1	P36007	326 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	PTI1	P39927	425 aa	Predicted RBP	7.15	□□□□□ -1.26
SAN1	YDR143C	PIG2	P40187	538 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	YIL029C	P40538	142 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	YHC3	P47040	408 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	HAS1	Q03532	505 aa	Known RBP	7.15	□□□□□ -1.26
SAN1	YDR143C	THI74	Q04083	370 aa		7.15	□□□□□ -1.26
SAN1	YDR143C	RRP15	Q06511	250 aa	Predicted RBP	7.15	□□□□□ -1.26
SAN1	YDR143C	MPD1	Q12404	318 aa	Known RBP	7.15	□□□□□ -1.26
SAN1	YDR143C	OLE1	P21147	510 aa	Known RBP	7.15	□□□□□ -1.27
SAN1	YDR143C	NAT2	P37293	288 aa		7.15	□□□□□ -1.27
SAN1	YDR143C	FAT1	P38225	669 aa		7.15	□□□□□ -1.27
SAN1	YDR143C	YIP5	P53108	310 aa		7.15	□□□□□ -1.27
SAN1	YDR143C	DID2	P69771	204 aa		7.15	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms