RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YJR011CP47086 261 aaPredicted RBP10.74□□□□□ -0.69
PTP1YDL230W YNR048WP53740 393 aa10.74□□□□□ -0.69
PTP1YDL230W CWC25P53854 179 aaKnown RBP10.74□□□□□ -0.69
PTP1YDL230W YNL165WP53891 406 aa10.74□□□□□ -0.69
PTP1YDL230W HHT1P61830 136 aa10.74□□□□□ -0.69
PTP1YDL230W TGS1Q12052 315 aa10.74□□□□□ -0.69
PTP1YDL230W RPS31P05759 152 aaKnown RBP10.73□□□□□ -0.69
PTP1YDL230W RPL30P14120 105 aaKnown RBP10.73□□□□□ -0.69
PTP1YDL230W IFM1P25038 676 aa10.73□□□□□ -0.69
PTP1YDL230W NUD1P32336 851 aa10.73□□□□□ -0.69
PTP1YDL230W ASP1P38986 381 aaPredicted RBP10.73□□□□□ -0.69
PTP1YDL230W PNC1P53184 216 aaKnown RBP10.73□□□□□ -0.69
PTP1YDL230W PBP1P53297 722 aaKnown RBP10.73□□□□□ -0.69
PTP1YDL230W ATG4P53867 494 aa10.73□□□□□ -0.69
PTP1YDL230W COQ11Q05892 277 aa10.73□□□□□ -0.69
PTP1YDL230W THI72Q08579 599 aa10.73□□□□□ -0.69
PTP1YDL230W TDH3P00359 332 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
PTP1YDL230W REP2P03872 296 aa10.72□□□□□ -0.69
PTP1YDL230W STE4P18851 423 aa10.72□□□□□ -0.69
PTP1YDL230W MID1P41821 548 aa10.72□□□□□ -0.69
PTP1YDL230W GNA1P43577 159 aaPredicted RBP10.72□□□□□ -0.69
PTP1YDL230W GWT1P47026 490 aa10.72□□□□□ -0.69
PTP1YDL230W PHO23P50947 330 aa10.72□□□□□ -0.69
PTP1YDL230W SKP1P52286 194 aa10.72□□□□□ -0.69
PTP1YDL230W EST3Q03096 181 aa10.72□□□□□ -0.69
PTP1YDL230W THI74Q04083 370 aa10.72□□□□□ -0.69
PTP1YDL230W YDR387CQ04162 555 aa10.72□□□□□ -0.69
PTP1YDL230W SPR28Q04921 423 aa10.72□□□□□ -0.69
PTP1YDL230W BER1Q06688 274 aaKnown RBP10.72□□□□□ -0.69
PTP1YDL230W MRX9Q07349 420 aaKnown RBP10.72□□□□□ -0.69
PTP1YDL230W VAM3Q12241 283 aa10.72□□□□□ -0.69
PTP1YDL230W CSF1Q12150 2958 aa10.72□□□□□ -0.69
PTP1YDL230W CDC28P00546 298 aaKnown RBP10.71□□□□□ -0.69
PTP1YDL230W MCM1P11746 286 aa10.71□□□□□ -0.69
PTP1YDL230W OLE1P21147 510 aaKnown RBP10.71□□□□□ -0.69
PTP1YDL230W MIR1P23641 311 aaKnown RBP10.71□□□□□ -0.69
PTP1YDL230W RPD3P32561 433 aa10.71□□□□□ -0.69
PTP1YDL230W CBT1P36038 271 aaPredicted RBP10.71□□□□□ -0.69
PTP1YDL230W SNN1P48232 102 aa10.71□□□□□ -0.69
PTP1YDL230W TNA1P53322 534 aa10.71□□□□□ -0.69
PTP1YDL230W SOK2P53438 785 aaPredicted RBP10.71□□□□□ -0.69
PTP1YDL230W SRP1Q02821 542 aaKnown RBP10.71□□□□□ -0.69
PTP1YDL230W YLR146W-AQ2V2P1 62 aa10.71□□□□□ -0.69
PTP1YDL230W SSA3P09435 649 aaKnown RBP10.7□□□□□ -0.7
PTP1YDL230W YBR197CP38306 217 aa10.7□□□□□ -0.7
PTP1YDL230W IKS1P47042 667 aa10.7□□□□□ -0.7
PTP1YDL230W ACT1P60010 375 aaKnown RBP10.7□□□□□ -0.7
PTP1YDL230W ODC1Q03028 310 aa10.7□□□□□ -0.7
PTP1YDL230W YHR213W-AQ8TGT4 77 aa10.7□□□□□ -0.7
PTP1YDL230W Q0144Q9ZZW2 109 aa10.7□□□□□ -0.7
PTP1YDL230W QCR2P07257 368 aa10.69□□□□□ -0.7
PTP1YDL230W ARO3P14843 370 aaKnown RBP10.69□□□□□ -0.7
PTP1YDL230W FAT1P38225 669 aa10.69□□□□□ -0.7
PTP1YDL230W UBS1P38290 277 aa10.69□□□□□ -0.7
PTP1YDL230W AGX1P43567 385 aa10.69□□□□□ -0.7
PTP1YDL230W BUL1P48524 976 aa10.69□□□□□ -0.7
PTP1YDL230W NCE102Q12207 173 aaRIP-Chip data10.69□□□□□ -0.7not detected
PTP1YDL230W MED4Q12343 284 aa10.69□□□□□ -0.7
PTP1YDL230W RPP2BP02400 110 aaKnown RBP10.68□□□□□ -0.7
PTP1YDL230W MRS4P23500 304 aa10.68□□□□□ -0.7
PTP1YDL230W CNB1P25296 175 aa10.68□□□□□ -0.7
PTP1YDL230W GLC7P32598 312 aaKnown RBP10.68□□□□□ -0.7
PTP1YDL230W EDS1P38073 919 aa10.68□□□□□ -0.7
PTP1YDL230W MTC6P38849 526 aa10.68□□□□□ -0.7
PTP1YDL230W MCM22P47167 239 aa10.68□□□□□ -0.7
PTP1YDL230W YNR040WP53736 256 aa10.68□□□□□ -0.7
PTP1YDL230W ELA1P53861 379 aaPredicted RBP10.68□□□□□ -0.7
PTP1YDL230W VPS28Q02767 242 aa10.68□□□□□ -0.7
PTP1YDL230W GAL1P04385 528 aa10.67□□□□□ -0.7
PTP1YDL230W REC114P32841 428 aa10.67□□□□□ -0.7
PTP1YDL230W SWD2P36104 329 aaPredicted RBP10.67□□□□□ -0.7
PTP1YDL230W LAG1P38703 411 aa10.67□□□□□ -0.7
PTP1YDL230W SSN8P47821 323 aa10.67□□□□□ -0.7
PTP1YDL230W YAP6Q03935 383 aa10.67□□□□□ -0.7
PTP1YDL230W CAC2Q04199 468 aa10.67□□□□□ -0.7
PTP1YDL230W FCF2Q12035 217 aaPredicted RBP10.67□□□□□ -0.7
PTP1YDL230W YDL180WQ12301 547 aa10.67□□□□□ -0.7
PTP1YDL230W IZH2Q12442 317 aa10.67□□□□□ -0.7
PTP1YDL230W CBP6P07253 162 aaPredicted RBP10.66□□□□□ -0.7
PTP1YDL230W UBI4P0CG63 381 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W RPL40AP0CH08 128 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W RPL40BP0CH09 128 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W PEX4P29340 183 aa10.66□□□□□ -0.7
PTP1YDL230W DEG1P31115 442 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W OCH1P31755 480 aa10.66□□□□□ -0.7
PTP1YDL230W SRB7P47822 140 aa10.66□□□□□ -0.7
PTP1YDL230W PKP2P53170 491 aa10.66□□□□□ -0.7
PTP1YDL230W HRI1Q05905 244 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W USB1Q12208 290 aaKnown RBP10.66□□□□□ -0.7
PTP1YDL230W YCT1Q12235 531 aa10.66□□□□□ -0.7
PTP1YDL230W VMA9Q3E7B6 73 aa10.66□□□□□ -0.7
PTP1YDL230W TY1A-DR4O74302 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-AP0CX57 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-PR1P0CX58 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-ORP0CX59 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-PR2P0CX60 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-DR5P0CX65 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-ER2P0CX66 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-GR3P0CX67 440 aa10.65□□□□□ -0.7
PTP1YDL230W TY1A-LR1P0CX68 440 aa10.65□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms